Gene annotation
| Transcriptome id | Sobic.002G208800.4,Sobic.002G208800.5,Sobic.002G208800.2,Sobic.002G208800.3 |
|---|---|
| Synonym | ATGLR2.8, GLR2.8 |
| Functional annotation | glutamate receptor, putative, expressed |
| UniProt | A0A1W0W5B1 , A0A1W0W543 , A0A1W0W5B2 |
| Pfam | PF00060 PF00497 PF01094 PF00060 PF13458 PF00497 |
| Panther DB | PTHR18966 PTHR18966:SF223 |
| NCBI CDD | KOG1052; Glutamate-gated kainate-type ion channel receptor subunit GluR5 and related subunits |
| KEGG Orthology | K05387; glutamate receptor, ionotropic, plant |
| Gene Ontology | GO:0016020; membrane GO:0004970ionotropic glutamate receptor activity |
Orthologs (automatic annotation)
| TAIR | AT2G29110 : glutamate receptor 2.8,glutamate receptor 2.2 |
|---|---|
| RAP-DB (Rice) | LOC_Os09g25990.1 : glutamate receptor, putative, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | KQJ90319 |
| Barley | HORVU5Hr1G063540.7 , HORVU5Hr1G063540.6 , HORVU5Hr1G063540.9 , HORVU5Hr1G010420.5 , HORVU5Hr1G010420.6 , HORVU5Hr1G010420.7 , HORVU5Hr1G010420.1 , HORVU5Hr1G063540.11 , HORVU5Hr1G063540.13 , HORVU5Hr1G063540.12 , HORVU5Hr1G063540.14 , HORVU5Hr1G010420.18 , HORVU5Hr1G010420.19 , HORVU5Hr1G010420.17 , HORVU5Hr1G010420.12 , HORVU5Hr1G010420.11 , HORVU5Hr1G010420.24 , HORVU5Hr1G010420.23 , HORVU5Hr1G010420.22 , HORVU5Hr1G010420.21 , HORVU5Hr1G010420.20 |
| Wheat | TraesCS5A02G218600 , TraesCS5D02G051300 , TraesCS5D02G266800 , TraesCS5A02G259100 , TraesCS5D02G266900 , TraesCS5B02G046400 , TraesCS5B02G217700 , TraesCS5B02G257800 , TraesCS5D02G226600 , TraesCS5A02G042800 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.005G171001 | - | - |
| 2 | Sobic.005G178400 | helix-loop-helix DNA-binding domain containing protein, expressed | - |
| 3 | Sobic.002G388800 | cytochrome P450 72A1, putative, expressed | - |
| 4 | Sobic.002G090100 | - | - |
| 5 | Sobic.002G090100 | - | - |
| 6 | Sobic.002G090100 | - | - |
| 7 | Sobic.002G090100 | - | - |
| 8 | Sobic.002G090100 | - | - |
| 9 | Sobic.002G090100 | - | - |
| 10 | Sobic.007G067616 | - | - |
| 11 | Sobic.003G247800 | cold acclimation protein WCOR413, putative, expressed | - |
| 12 | Sobic.004G273300 | ubiquitin family protein, putative, expressed | K08770: ubiquitin C |
| 13 | Sobic.003G112400 | expressed protein | - |
| 14 | Sobic.001G232500 | glycine-rich cell wall structural protein 2 precursor, putative, expressed | - |
| 15 | Sobic.001G381400 | expressed protein | - |
| 16 | Sobic.004G263100 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed | K13993: HSP20 family protein |
| 17 | Sobic.001G425600 | "similar to 17.4 kDa class I heat shock protein 3, maped into a unique stay green QTL (QSTG11_1) involved in drought tolerance."(PubMedID : 24655390)@"SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@similar to 17.4 kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@similar to 17.4kDa class I heat shock protein 3(PubMedID : 24655390)@hsp20/alpha crystallin family protein, putative, expressed | K13993: HSP20 family protein |
| 18 | Sobic.002G238600 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@- | - |
| 19 | Sobic.004G094900 | expressed protein | - |
| 20 | Sobic.004G092800 | Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@hsp20/alpha crystallin family protein, putative, expressed | K13993: HSP20 family protein |
Gene co-expression network
Octagon: transcription factors
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