Gene annotation
Transcriptome id Sobic.002G216000.1
Synonym Sb02g025810
Functional annotation Up-reguralion under drought (PubMedID : 24916767)
OsSub57 - Putative Subtilisin homologue, expressed
UniProt C5XDQ1
Pfam PF00082 PF02225 PF05922
Panther DB PTHR10795:SF437 PTHR10795
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0004252; serine-type endopeptidase activity GO:0006508proteolysis


Orthologs (automatic annotation)
TAIR AT2G05920 : Subtilase family protein
RAP-DB (Rice) LOC_Os09g26920.1 : OsSub57 - Putative Subtilisin homologue, expressed
MaizeGDB (Corn) Zm00025a047151
Brachypodium KQK23709 , KQJ90410
Barley HORVU5Hr1G061990.1 , HORVU5Hr1G061990.2
Wheat TraesCS5A02G214200 , TraesCS5B02G209500 , TraesCS5D02G217700
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G125300 phospholipase, putative, expressed -
2 Sobic.004G274800 protein transport protein-related, putative, expressed -
3 Sobic.008G091557 - -
4 Sobic.008G072600 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase
5 Sobic.005G107500 peptide transporter PTR2, putative, expressed -
6 Sobic.007G038600 monodehydroascorbate reductase, putative, expressed K08232: monodehydroascorbate reductase (NADH)
7 Sobic.006G081000 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
8 Sobic.004G034200 STRUBBELIG-RECEPTOR FAMILY 1 precursor, putative, expressed -
9 Sobic.003G161500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
10 Sobic.010G220300 glucan endo-1,3-beta-glucosidase 12 precursor, putative, expressed -
11 Sobic.009G063400 "CESA1-like or CESA10-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@CESA1 - cellulose synthase, expressed K10999: cellulose synthase A
12 Sobic.007G156800 "SGL1(Ortholog in rice:Nakagawa et al., 2012)"(PubMedID : 31659907)@expressed protein -
13 Sobic.002G275500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
15 Sobic.001G131001 - -
16 Sobic.007G038500 aquaporin protein, putative, expressed K09874: aquaporin NIP
17 Sobic.004G108800 cytochrome P450, putative, expressed -
18 Sobic.003G266600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CPuORF25 - conserved peptide uORF-containing transcript, expressed K05929: E2.1.1.103, phosphoethanolamine N-methyltransferase
19 Sobic.001G424000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@fringe-related protein, putative, expressed -
20 Sobic.003G052100 receptor-like protein kinase 2 precursor, putative, expressed -


Gene co-expression network
sample Sobic002G216000 Sobic002G216000 Sobic009G125300 Sobic009G125300 Sobic002G216000--Sobic009G125300 Sobic004G274800 Sobic004G274800 Sobic002G216000--Sobic004G274800 Sobic008G091557 Sobic008G091557 Sobic002G216000--Sobic008G091557 Sobic008G072600 Sobic008G072600 Sobic002G216000--Sobic008G072600 Sobic005G107500 Sobic005G107500 Sobic002G216000--Sobic005G107500 Sobic007G038600 Sobic007G038600 Sobic002G216000--Sobic007G038600 Sobic006G081000 Sobic006G081000 Sobic002G216000--Sobic006G081000 Sobic004G034200 Sobic004G034200 Sobic002G216000--Sobic004G034200 Sobic003G161500 Sobic003G161500 Sobic002G216000--Sobic003G161500 Sobic009G125300--Sobic002G216000 Sobic009G125300--Sobic008G091557 Sobic001G131001 Sobic001G131001 Sobic009G125300--Sobic001G131001 Sobic009G125300--Sobic008G072600 Sobic009G125300--Sobic005G107500 Sobic009G221900 Sobic009G221900 Sobic009G125300--Sobic009G221900 Sobic009G125300--Sobic004G034200 Sobic009G125300--Sobic007G038600 Sobic008G133000 Sobic008G133000 Sobic009G125300--Sobic008G133000 Sobic001G437500 Sobic001G437500 Sobic004G274800--Sobic001G437500 Sobic004G274800--Sobic006G081000 Sobic007G139500 Sobic007G139500 Sobic004G274800--Sobic007G139500 Sobic001G196000 Sobic001G196000 Sobic004G274800--Sobic001G196000 Sobic009G206500 Sobic009G206500 Sobic004G274800--Sobic009G206500 Sobic004G274800--Sobic003G161500 Sobic009G026101 Sobic009G026101 Sobic004G274800--Sobic009G026101 Sobic007G040301 Sobic007G040301 Sobic004G274800--Sobic007G040301 Sobic003G135400 Sobic003G135400 Sobic004G274800--Sobic003G135400 Sobic008G091557--Sobic004G034200 Sobic008G091557--Sobic007G038600 Sobic008G091557--Sobic008G133000 Sobic008G091557--Sobic009G221900 Sobic008G091557--Sobic001G131001 Sobic008G091557--Sobic005G107500 Sobic008G091557--Sobic008G072600 Sobic008G091557--Sobic009G125300 Sobic001G263900 Sobic001G263900 Sobic008G091557--Sobic001G263900 Sobic006G256200 Sobic006G256200 Sobic008G072600--Sobic006G256200 Sobic009G017500 Sobic009G017500 Sobic008G072600--Sobic009G017500 Sobic008G072600--Sobic008G091557 Sobic008G072600--Sobic009G221900 Sobic009G063400 Sobic009G063400 Sobic008G072600--Sobic009G063400 Sobic008G072600--Sobic005G107500 Sobic008G072600--Sobic007G038600 Sobic008G072600--Sobic001G263900 Sobic010G096100 Sobic010G096100 Sobic008G072600--Sobic010G096100 Sobic001G002800 Sobic001G002800 Sobic005G107500--Sobic001G002800 Sobic006G117500 Sobic006G117500 Sobic005G107500--Sobic006G117500 Sobic002G254900 Sobic002G254900 Sobic005G107500--Sobic002G254900 Sobic005G107500--Sobic008G133000 Sobic003G287200 Sobic003G287200 Sobic005G107500--Sobic003G287200 Sobic005G089200 Sobic005G089200 Sobic005G107500--Sobic005G089200 Sobic005G104200 Sobic005G104200 Sobic005G107500--Sobic005G104200 Sobic001G503000 Sobic001G503000 Sobic005G107500--Sobic001G503000 Sobic010G096700 Sobic010G096700 Sobic005G107500--Sobic010G096700 Sobic007G038600--Sobic004G034200 Sobic007G038600--Sobic008G091557 Sobic007G038600--Sobic001G131001 Sobic007G106500 Sobic007G106500 Sobic007G038600--Sobic007G106500 Sobic004G108800 Sobic004G108800 Sobic007G038600--Sobic004G108800 Sobic004G156250 Sobic004G156250 Sobic007G038600--Sobic004G156250 Sobic007G038500 Sobic007G038500 Sobic007G038600--Sobic007G038500 Sobic007G038600--Sobic006G117500 Sobic009G015166 Sobic009G015166 Sobic007G038600--Sobic009G015166 Sobic006G081000--Sobic004G274800 Sobic006G081000--Sobic001G437500 Sobic006G081000--Sobic001G196000 Sobic007G000700 Sobic007G000700 Sobic006G081000--Sobic007G000700 Sobic004G243800 Sobic004G243800 Sobic006G081000--Sobic004G243800 Sobic002G347900 Sobic002G347900 Sobic006G081000--Sobic002G347900 Sobic006G081000--Sobic007G139500 Sobic003G401800 Sobic003G401800 Sobic006G081000--Sobic003G401800 Sobic002G276600 Sobic002G276600 Sobic006G081000--Sobic002G276600 Sobic004G034200--Sobic005G089200 Sobic005G149600 Sobic005G149600 Sobic004G034200--Sobic005G149600 Sobic001G026300 Sobic001G026300 Sobic004G034200--Sobic001G026300 Sobic004G034200--Sobic004G108800 Sobic007G156800 Sobic007G156800 Sobic004G034200--Sobic007G156800 Sobic003G015200 Sobic003G015200 Sobic004G034200--Sobic003G015200 Sobic004G034200--Sobic008G091557 Sobic004G034200--Sobic001G131001 Sobic004G034200--Sobic007G038600 Sobic003G161500--Sobic004G274800 Sobic003G161500--Sobic009G206500 Sobic006G281400 Sobic006G281400 Sobic003G161500--Sobic006G281400 Sobic002G318300 Sobic002G318300 Sobic003G161500--Sobic002G318300 Sobic003G052100 Sobic003G052100 Sobic003G161500--Sobic003G052100 Sobic008G032800 Sobic008G032800 Sobic003G161500--Sobic008G032800 Sobic003G161500--Sobic007G139500 Sobic006G109500 Sobic006G109500 Sobic003G161500--Sobic006G109500 Sobic003G369200 Sobic003G369200 Sobic003G161500--Sobic003G369200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.