Gene annotation
Transcriptome id Sobic.003G266600.1
Synonym Sb03g031950, PMEAMT, AtPMEAMT
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
CPuORF25 - conserved peptide uORF-containing transcript, expressed
UniProt C5XHH3
Pfam PF13489 PF08241
Panther DB PTHR10108 PTHR10108:SF793
NCBI CDD KOG1269; SAM-dependent methyltransferases
KEGG Orthology K05929; E2.1.1.103, phosphoethanolamine N-methyltransferase
Gene Ontology GO:0008168; methyltransferase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT3G18000 : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
RAP-DB (Rice) LOC_Os01g50030.1 : CPuORF25 - conserved peptide uORF-containing transcript, expressed
MaizeGDB (Corn) Zm00025a027918 , Zm00025a038880
Brachypodium KQK09313 , KQK09314
Barley HORVU3Hr1G064990.11 , HORVU3Hr1G064990.10 , HORVU3Hr1G064990.9 , HORVU3Hr1G064990.8 , HORVU3Hr1G064990.5 , HORVU3Hr1G064990.4 , HORVU3Hr1G064990.7 , HORVU3Hr1G064990.6 , HORVU3Hr1G064990.1 , HORVU3Hr1G064990.3 , HORVU3Hr1G064990.2
Wheat TraesCS3A02G258800 , TraesCS3A02G258800 , TraesCS3D02G258900 , TraesCS3B02G291700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G423700 - -
2 Sobic.004G185200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@homeobox associated leucine zipper, putative, expressed -
3 Sobic.005G183200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@14-3-3 protein, putative, expressed K06630: 14-3-3 protein epsilon
4 Sobic.003G244100 "ABA-Responsive Element (ABRE) -binding factor BZ-1 basic-leucine zipper, maped into a stay green QTL (QSTG12_3"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under drought(PubMedID : 24916767)@transcription factor, putative, expressed K09060: plant G-box-binding factor
5 Sobic.009G116700 "dehydrin SbDHN1, maps into mapped into a stay green mQTL (QSTG meta1.9)"(PubMedID : 24655390)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@rab16/17 homolog(PubMedID : 15579713)@dehydrin, putative, expressed -
6 Sobic.002G141800 expressed protein -
7 Sobic.003G011400 similar to Os01g0225600 protein(PubMedID : 29862293)@late embryogenesis abundant protein, putative, expressed -
8 Sobic.002G097000 expressed protein -
9 Sobic.009G046200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@peripheral-type benzodiazepine receptor, putative, expressed -
10 Sobic.002G216000 Up-reguralion under drought(PubMedID : 24916767)@OsSub57 - Putative Subtilisin homologue, expressed -
11 Sobic.005G082860 - K09338: homeobox-leucine zipper protein
12 Sobic.003G055900 phosphatidylinositolglycan-related, putative, expressed K03858: PIGH, phosphatidylinositol N-acetylglucosaminyltransferase subunit H
13 Sobic.001G200700 expressed protein -
14 Sobic.005G088700 expressed protein -
15 Sobic.006G114700 Up-reguralion under drought(PubMedID : 24916767)@phosphofructokinase 2("PubMedID : 26759170,PubMedID : 24597475")@phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
16 Sobic.006G116801 - -
17 Sobic.001G373600 Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
18 Sobic.003G194400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
19 Sobic.003G161500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
20 Sobic.001G466450 - -


Gene co-expression network
sample Sobic003G266600 Sobic003G266600 Sobic002G423700 Sobic002G423700 Sobic003G266600--Sobic002G423700 Sobic004G185200 Sobic004G185200 Sobic003G266600--Sobic004G185200 Sobic005G183200 Sobic005G183200 Sobic003G266600--Sobic005G183200 Sobic003G244100 Sobic003G244100 Sobic003G266600--Sobic003G244100 Sobic009G116700 Sobic009G116700 Sobic003G266600--Sobic009G116700 Sobic002G141800 Sobic002G141800 Sobic003G266600--Sobic002G141800 Sobic003G011400 Sobic003G011400 Sobic003G266600--Sobic003G011400 Sobic002G097000 Sobic002G097000 Sobic003G266600--Sobic002G097000 Sobic009G046200 Sobic009G046200 Sobic003G266600--Sobic009G046200 Sobic002G423700--Sobic004G185200 Sobic002G423700--Sobic002G097000 Sobic002G423700--Sobic003G266600 Sobic002G423700--Sobic005G183200 Sobic002G423700--Sobic003G011400 Sobic005G082860 Sobic005G082860 Sobic002G423700--Sobic005G082860 Sobic003G194400 Sobic003G194400 Sobic002G423700--Sobic003G194400 Sobic001G200700 Sobic001G200700 Sobic002G423700--Sobic001G200700 Sobic002G423700--Sobic009G046200 Sobic004G185200--Sobic002G423700 Sobic004G185200--Sobic005G183200 Sobic004G185200--Sobic002G097000 Sobic007G156800 Sobic007G156800 Sobic004G185200--Sobic007G156800 Sobic004G185200--Sobic003G011400 Sobic005G088700 Sobic005G088700 Sobic004G185200--Sobic005G088700 Sobic004G185200--Sobic003G194400 Sobic004G185200--Sobic001G200700 Sobic001G323600 Sobic001G323600 Sobic004G185200--Sobic001G323600 Sobic005G183200--Sobic003G194400 Sobic005G183200--Sobic003G011400 Sobic006G114700 Sobic006G114700 Sobic005G183200--Sobic006G114700 Sobic010G101300 Sobic010G101300 Sobic005G183200--Sobic010G101300 Sobic005G183200--Sobic001G200700 Sobic003G292400 Sobic003G292400 Sobic005G183200--Sobic003G292400 Sobic005G183200--Sobic009G116700 Sobic005G183200--Sobic005G088700 Sobic005G183200--Sobic001G323600 Sobic003G244100--Sobic002G141800 Sobic003G244100--Sobic009G116700 Sobic003G244100--Sobic009G046200 Sobic001G409400 Sobic001G409400 Sobic003G244100--Sobic001G409400 Sobic006G104000 Sobic006G104000 Sobic003G244100--Sobic006G104000 Sobic003G244100--Sobic003G011400 Sobic003G244100--Sobic002G097000 Sobic001G373600 Sobic001G373600 Sobic003G244100--Sobic001G373600 Sobic001G466450 Sobic001G466450 Sobic003G244100--Sobic001G466450 Sobic009G116700--Sobic002G141800 Sobic009G116700--Sobic003G011400 Sobic009G116700--Sobic009G046200 Sobic007G164500 Sobic007G164500 Sobic009G116700--Sobic007G164500 Sobic009G116700--Sobic001G373600 Sobic009G116700--Sobic001G466450 Sobic002G141800--Sobic009G116700 Sobic002G141800--Sobic003G244100 Sobic002G141800--Sobic003G011400 Sobic002G141800--Sobic009G046200 Sobic002G141800--Sobic007G164500 Sobic002G141800--Sobic001G373600 Sobic003G024600 Sobic003G024600 Sobic002G141800--Sobic003G024600 Sobic002G141800--Sobic001G323600 Sobic002G141800--Sobic001G466450 Sobic003G011400--Sobic001G200700 Sobic003G011400--Sobic009G116700 Sobic003G011400--Sobic009G046200 Sobic003G011400--Sobic007G164500 Sobic003G011400--Sobic001G323600 Sobic003G011400--Sobic001G373600 Sobic003G011400--Sobic003G024600 Sobic003G011400--Sobic001G466450 Sobic002G097000--Sobic001G373600 Sobic002G097000--Sobic001G466450 Sobic002G097000--Sobic007G164500 Sobic009G046200--Sobic001G373600 Sobic009G046200--Sobic001G466450 Sobic009G046200--Sobic007G164500
Octagon: transcription factors


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