Gene annotation
Transcriptome id Sobic.002G227000.3,Sobic.002G227000.1,Sobic.002G227000.2
Synonym NQR, Sb02g026730
Functional annotation zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed
UniProt A0A1W0W5D6 , A0A1W0W5E4 , A0A1B6QCZ1
Pfam PF08240 PF13561 PF00107 PF08240 PF13561 PF13602 PF00107
Panther DB PTHR11695 PTHR11695:SF264
NCBI CDD KOG4169; 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases
KEGG Orthology K07119; PTGR3, prostaglandin reductase 3
Gene Ontology GO:0016491; oxidoreductase activity GO:0008270zinc ion binding


Orthologs (automatic annotation)
TAIR AT1G49670 : ARP protein (REF)
RAP-DB (Rice) LOC_Os09g28570.1 : zinc-binding alcohol dehydrogenase domain-containing protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a047268 , Zm00025a047267 , Zm00025a047280
Brachypodium PNT64730 , PNT64729 , PNT64728 , PNT64727 , KQJ90526
Barley HORVU5Hr1G068630.18 , HORVU5Hr1G068630.19 , HORVU5Hr1G068630.10 , HORVU5Hr1G068630.11 , HORVU5Hr1G068630.12 , HORVU5Hr1G068630.13 , HORVU5Hr1G068630.14 , HORVU5Hr1G068630.15 , HORVU5Hr1G068630.16 , HORVU5Hr1G068630.17 , HORVU5Hr1G068630.25 , HORVU5Hr1G068630.29 , HORVU5Hr1G068630.28 , HORVU5Hr1G068630.24 , HORVU5Hr1G068630.27 , HORVU5Hr1G068630.26 , HORVU5Hr1G068630.20 , HORVU5Hr1G068630.23 , HORVU5Hr1G068630.22 , HORVU5Hr1G068630.32 , HORVU5Hr1G068630.33 , HORVU5Hr1G068630.30 , HORVU5Hr1G068630.31 , HORVU5Hr1G068630.36 , HORVU5Hr1G068630.37 , HORVU5Hr1G068630.34 , HORVU5Hr1G068630.35 , HORVU5Hr1G068630.8 , HORVU5Hr1G068630.9 , HORVU5Hr1G068630.2 , HORVU5Hr1G068630.1 , HORVU5Hr1G068630.6 , HORVU5Hr1G068630.7 , HORVU5Hr1G068630.4 , HORVU5Hr1G068630.5
Wheat TraesCS5A02G240300 , TraesCS5D02G246800 , TraesCS5A02G240400 , TraesCS5B02G238500 , TraesCS5D02G246800 , TraesCS5B02G238400 , TraesCS5B02G238400 , TraesCS5D02G247000 , TraesCS5D02G247000
Populus -


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cDNA sequences
Sobic.002G227000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G274700 glycosyl transferase family 8, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
2 Sobic.001G075201 - -
3 Sobic.008G154600 pectinesterase inhibitor domain containing protein, putative, expressed -
4 Sobic.001G075200 - -
5 Sobic.002G060400 OsFBX237 - F-box domain containing protein, expressed -
6 Sobic.009G119100 hexokinase, putative, expressed K00844: hexokinase
7 Sobic.001G392700 AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
8 Sobic.001G050500 galactosyltransferase family protein, putative, expressed -
9 Sobic.005G067966 - -
10 Sobic.004G041300 OsFBX248 - F-box domain containing protein, expressed -
11 Sobic.002G147400 homeodomain-related, putative, expressed -
12 Sobic.001G305200 expressed protein -
13 Sobic.009G056900 acetyltransferase, GNAT family protein, expressed -
14 Sobic.001G305900 GTP binding protein, putative, expressed -
15 Sobic.006G062600 TUDOR protein with multiple SNc domains, putative, expressed K15979: staphylococcal nuclease domain-containing protein 1
16 Sobic.008G041300 - K14777: DDX47, ATP-dependent RNA helicase DDX47/RRP3
17 Sobic.004G045632 - -
18 Sobic.002G060200 OsFBX238 - F-box domain containing protein, expressed -
19 Sobic.004G186400 - -
20 Sobic.003G293400 oligosaccharyl transferase, putative, expressed K07151: dolichyl-diphosphooligosaccharide---protein glycosyltransferase


Gene co-expression network
sample Sobic002G227000 Sobic002G227000 Sobic002G274700 Sobic002G274700 Sobic002G227000--Sobic002G274700 Sobic001G075201 Sobic001G075201 Sobic002G227000--Sobic001G075201 Sobic008G154600 Sobic008G154600 Sobic002G227000--Sobic008G154600 Sobic001G075200 Sobic001G075200 Sobic002G227000--Sobic001G075200 Sobic002G060400 Sobic002G060400 Sobic002G227000--Sobic002G060400 Sobic009G119100 Sobic009G119100 Sobic002G227000--Sobic009G119100 Sobic001G392700 Sobic001G392700 Sobic002G227000--Sobic001G392700 Sobic001G050500 Sobic001G050500 Sobic002G227000--Sobic001G050500 Sobic005G067966 Sobic005G067966 Sobic002G227000--Sobic005G067966 Sobic010G051800 Sobic010G051800 Sobic002G274700--Sobic010G051800 Sobic002G322400 Sobic002G322400 Sobic002G274700--Sobic002G322400 Sobic002G304500 Sobic002G304500 Sobic002G274700--Sobic002G304500 Sobic008G087200 Sobic008G087200 Sobic002G274700--Sobic008G087200 Sobic003G255700 Sobic003G255700 Sobic002G274700--Sobic003G255700 Sobic001G131900 Sobic001G131900 Sobic002G274700--Sobic001G131900 Sobic010G009600 Sobic010G009600 Sobic002G274700--Sobic010G009600 Sobic003G293400 Sobic003G293400 Sobic002G274700--Sobic003G293400 Sobic006G100266 Sobic006G100266 Sobic002G274700--Sobic006G100266 Sobic001G075201--Sobic009G119100 Sobic001G075201--Sobic001G392700 Sobic009G056900 Sobic009G056900 Sobic001G075201--Sobic009G056900 Sobic002G147400 Sobic002G147400 Sobic001G075201--Sobic002G147400 Sobic001G075201--Sobic001G075200 Sobic005G201200 Sobic005G201200 Sobic001G075201--Sobic005G201200 Sobic001G075201--Sobic008G154600 Sobic002G014032 Sobic002G014032 Sobic001G075201--Sobic002G014032 Sobic006G038700 Sobic006G038700 Sobic001G075201--Sobic006G038700 Sobic008G154600--Sobic009G119100 Sobic008G154600--Sobic001G075201 Sobic008G154600--Sobic001G392700 Sobic001G305200 Sobic001G305200 Sobic008G154600--Sobic001G305200 Sobic008G154600--Sobic002G147400 Sobic008G154600--Sobic009G056900 Sobic008G154600--Sobic001G075200 Sobic004G186400 Sobic004G186400 Sobic008G154600--Sobic004G186400 Sobic001G313150 Sobic001G313150 Sobic008G154600--Sobic001G313150 Sobic001G075200--Sobic001G392700 Sobic001G075200--Sobic002G147400 Sobic001G075200--Sobic001G075201 Sobic006G062600 Sobic006G062600 Sobic001G075200--Sobic006G062600 Sobic001G075200--Sobic009G056900 Sobic001G075200--Sobic009G119100 Sobic001G075200--Sobic008G154600 Sobic001G075200--Sobic005G201200 Sobic007G068200 Sobic007G068200 Sobic001G075200--Sobic007G068200 Sobic002G060400--Sobic002G304500 Sobic004G064800 Sobic004G064800 Sobic002G060400--Sobic004G064800 Sobic002G060400--Sobic005G201200 Sobic010G255400 Sobic010G255400 Sobic002G060400--Sobic010G255400 Sobic008G041300 Sobic008G041300 Sobic002G060400--Sobic008G041300 Sobic001G076600 Sobic001G076600 Sobic002G060400--Sobic001G076600 Sobic007G060100 Sobic007G060100 Sobic002G060400--Sobic007G060100 Sobic002G015700 Sobic002G015700 Sobic002G060400--Sobic002G015700 Sobic002G158300 Sobic002G158300 Sobic002G060400--Sobic002G158300 Sobic009G119100--Sobic001G075201 Sobic009G119100--Sobic008G154600 Sobic009G119100--Sobic002G014032 Sobic009G119100--Sobic009G056900 Sobic009G119100--Sobic001G392700 Sobic009G119100--Sobic001G075200 Sobic009G119100--Sobic002G147400 Sobic004G041300 Sobic004G041300 Sobic009G119100--Sobic004G041300 Sobic009G119100--Sobic004G186400 Sobic001G392700--Sobic009G056900 Sobic001G392700--Sobic002G147400 Sobic001G392700--Sobic001G075201 Sobic002G066700 Sobic002G066700 Sobic001G392700--Sobic002G066700 Sobic001G392700--Sobic001G075200 Sobic001G392700--Sobic005G201200 Sobic001G392700--Sobic008G154600 Sobic001G392700--Sobic006G062600 Sobic002G266600 Sobic002G266600 Sobic001G392700--Sobic002G266600 Sobic001G305900 Sobic001G305900 Sobic001G050500--Sobic001G305900 Sobic001G050500--Sobic003G255700 Sobic009G186700 Sobic009G186700 Sobic001G050500--Sobic009G186700 Sobic007G218600 Sobic007G218600 Sobic001G050500--Sobic007G218600 Sobic003G270100 Sobic003G270100 Sobic001G050500--Sobic003G270100 Sobic007G148400 Sobic007G148400 Sobic001G050500--Sobic007G148400 Sobic003G308300 Sobic003G308300 Sobic001G050500--Sobic003G308300 Sobic010G160300 Sobic010G160300 Sobic001G050500--Sobic010G160300 Sobic001G050500--Sobic006G100266 Sobic004G198300 Sobic004G198300 Sobic005G067966--Sobic004G198300 Sobic005G067966--Sobic003G293400 Sobic004G353300 Sobic004G353300 Sobic005G067966--Sobic004G353300 Sobic001G433600 Sobic001G433600 Sobic005G067966--Sobic001G433600 Sobic002G392400 Sobic002G392400 Sobic005G067966--Sobic002G392400 Sobic005G067966--Sobic001G305900 Sobic002G313100 Sobic002G313100 Sobic005G067966--Sobic002G313100 Sobic007G189100 Sobic007G189100 Sobic005G067966--Sobic007G189100 Sobic007G105700 Sobic007G105700 Sobic005G067966--Sobic007G105700
Octagon: transcription factors


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