Gene annotation
Transcriptome id Sobic.002G255901.1
Synonym -
Functional annotation -
UniProt A0A1W0W5R1
Pfam PF07893
Panther DB PTHR33170 PTHR33170:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g05560.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G217700 carboxyl-terminal peptidase, putative, expressed -
2 Sobic.002G169200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsWAK51 - OsWAK receptor-like protein kinase, expressed -
3 Sobic.007G037800 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
4 Sobic.009G037200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
5 Sobic.001G315800 shikimate/quinate 5-dehydrogenase, putative, expressed -
6 Sobic.006G003700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.010G115900 ureide permease, putative, expressed -
8 Sobic.009G255100 hypersensitive-induced response protein, putative, expressed -
9 Sobic.001G145050 - -
10 Sobic.004G158050 - -
11 Sobic.004G210601 - -
12 Sobic.005G193600 3 Ketoacyl CoA synthetase 2 KCS2 (fatty acid elongase) (At)(PubMedID : 27208977)@3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
13 Sobic.009G252100 expressed protein -
14 Sobic.005G085500 - -
15 Sobic.002G174300 senescence-related tran- scription factor gene(PubMedID : 26317421)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WRKY74, expressed -
16 Sobic.009G202400 expressed protein -
17 Sobic.009G085700 - -
18 Sobic.004G019400 Protein terpene synthase 14 (At)(PubMedID : 27208977)@"Protein terpene synthase 14, S-linalool synthase (Os)"(PubMedID : 27208977)@terpene synthase, putative, expressed -
19 Sobic.002G265400 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed K13691: pathogen-inducible salicylic acid glucosyltransferase
20 Sobic.005G203300 tropinone reductase 2, putative, expressed K08081: tropinone reductase I


Gene co-expression network
sample Sobic002G255901 Sobic002G255901 Sobic005G217700 Sobic005G217700 Sobic002G255901--Sobic005G217700 Sobic002G169200 Sobic002G169200 Sobic002G255901--Sobic002G169200 Sobic007G037800 Sobic007G037800 Sobic002G255901--Sobic007G037800 Sobic009G037200 Sobic009G037200 Sobic002G255901--Sobic009G037200 Sobic001G315800 Sobic001G315800 Sobic002G255901--Sobic001G315800 Sobic006G003700 Sobic006G003700 Sobic002G255901--Sobic006G003700 Sobic010G115900 Sobic010G115900 Sobic002G255901--Sobic010G115900 Sobic009G255100 Sobic009G255100 Sobic002G255901--Sobic009G255100 Sobic001G145050 Sobic001G145050 Sobic002G255901--Sobic001G145050 Sobic002G337001 Sobic002G337001 Sobic005G217700--Sobic002G337001 Sobic001G450500 Sobic001G450500 Sobic005G217700--Sobic001G450500 Sobic005G217700--Sobic009G037200 Sobic002G257100 Sobic002G257100 Sobic005G217700--Sobic002G257100 Sobic003G421700 Sobic003G421700 Sobic005G217700--Sobic003G421700 Sobic003G088800 Sobic003G088800 Sobic005G217700--Sobic003G088800 Sobic005G063900 Sobic005G063900 Sobic005G217700--Sobic005G063900 Sobic005G055900 Sobic005G055900 Sobic005G217700--Sobic005G055900 Sobic006G113400 Sobic006G113400 Sobic005G217700--Sobic006G113400 Sobic002G169200--Sobic006G003700 Sobic002G169200--Sobic006G113400 Sobic001G136300 Sobic001G136300 Sobic002G169200--Sobic001G136300 Sobic004G181200 Sobic004G181200 Sobic002G169200--Sobic004G181200 Sobic004G160300 Sobic004G160300 Sobic002G169200--Sobic004G160300 Sobic004G158050 Sobic004G158050 Sobic002G169200--Sobic004G158050 Sobic005G193600 Sobic005G193600 Sobic002G169200--Sobic005G193600 Sobic006G246200 Sobic006G246200 Sobic002G169200--Sobic006G246200 Sobic001G146500 Sobic001G146500 Sobic002G169200--Sobic001G146500 Sobic009G252100 Sobic009G252100 Sobic007G037800--Sobic009G252100 Sobic009G202400 Sobic009G202400 Sobic007G037800--Sobic009G202400 Sobic004G019400 Sobic004G019400 Sobic007G037800--Sobic004G019400 Sobic004G210601 Sobic004G210601 Sobic007G037800--Sobic004G210601 Sobic008G060200 Sobic008G060200 Sobic007G037800--Sobic008G060200 Sobic008G060300 Sobic008G060300 Sobic007G037800--Sobic008G060300 Sobic005G093300 Sobic005G093300 Sobic007G037800--Sobic005G093300 Sobic007G129201 Sobic007G129201 Sobic007G037800--Sobic007G129201 Sobic005G193500 Sobic005G193500 Sobic007G037800--Sobic005G193500 Sobic010G193000 Sobic010G193000 Sobic009G037200--Sobic010G193000 Sobic009G037200--Sobic006G246200 Sobic009G037200--Sobic002G257100 Sobic005G203300 Sobic005G203300 Sobic009G037200--Sobic005G203300 Sobic009G037200--Sobic005G217700 Sobic007G157100 Sobic007G157100 Sobic009G037200--Sobic007G157100 Sobic009G037200--Sobic001G136300 Sobic005G085500 Sobic005G085500 Sobic009G037200--Sobic005G085500 Sobic007G089300 Sobic007G089300 Sobic009G037200--Sobic007G089300 Sobic001G201800 Sobic001G201800 Sobic001G315800--Sobic001G201800 Sobic004G078600 Sobic004G078600 Sobic001G315800--Sobic004G078600 Sobic004G209500 Sobic004G209500 Sobic001G315800--Sobic004G209500 Sobic006G045000 Sobic006G045000 Sobic001G315800--Sobic006G045000 Sobic001G315800--Sobic005G085500 Sobic002G209100 Sobic002G209100 Sobic001G315800--Sobic002G209100 Sobic002G349400 Sobic002G349400 Sobic001G315800--Sobic002G349400 Sobic002G423600 Sobic002G423600 Sobic001G315800--Sobic002G423600 Sobic004G195800 Sobic004G195800 Sobic001G315800--Sobic004G195800 Sobic006G003700--Sobic004G158050 Sobic006G229500 Sobic006G229500 Sobic006G003700--Sobic006G229500 Sobic002G195300 Sobic002G195300 Sobic006G003700--Sobic002G195300 Sobic006G003700--Sobic005G193600 Sobic006G003700--Sobic002G169200 Sobic006G003700--Sobic007G037800 Sobic001G381300 Sobic001G381300 Sobic006G003700--Sobic001G381300 Sobic006G003700--Sobic005G193500 Sobic006G003700--Sobic001G146500 Sobic005G115400 Sobic005G115400 Sobic010G115900--Sobic005G115400 Sobic009G214800 Sobic009G214800 Sobic010G115900--Sobic009G214800 Sobic005G128800 Sobic005G128800 Sobic010G115900--Sobic005G128800 Sobic010G143000 Sobic010G143000 Sobic010G115900--Sobic010G143000 Sobic009G070300 Sobic009G070300 Sobic010G115900--Sobic009G070300 Sobic008G120132 Sobic008G120132 Sobic010G115900--Sobic008G120132 Sobic009G107020 Sobic009G107020 Sobic010G115900--Sobic009G107020 Sobic010G115900--Sobic002G337001 Sobic001G467700 Sobic001G467700 Sobic010G115900--Sobic001G467700 Sobic009G255100--Sobic001G145050 Sobic002G366100 Sobic002G366100 Sobic009G255100--Sobic002G366100 Sobic002G041800 Sobic002G041800 Sobic009G255100--Sobic002G041800 Sobic006G060800 Sobic006G060800 Sobic009G255100--Sobic006G060800 Sobic001G340700 Sobic001G340700 Sobic009G255100--Sobic001G340700 Sobic001G005500 Sobic001G005500 Sobic009G255100--Sobic001G005500 Sobic002G271600 Sobic002G271600 Sobic009G255100--Sobic002G271600 Sobic002G195700 Sobic002G195700 Sobic009G255100--Sobic002G195700 Sobic002G265400 Sobic002G265400 Sobic009G255100--Sobic002G265400 Sobic001G145050--Sobic009G255100 Sobic001G145050--Sobic002G041800 Sobic001G145050--Sobic002G366100 Sobic001G145050--Sobic006G060800 Sobic003G402200 Sobic003G402200 Sobic001G145050--Sobic003G402200 Sobic001G145050--Sobic004G078600 Sobic001G145050--Sobic005G085500 Sobic001G145050--Sobic002G271600 Sobic001G145050--Sobic002G209100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.