Gene annotation
Transcriptome id Sobic.002G273400.1
Synonym Sb02g030700, IAA4, SbIAA6, auxin/indole-3-acetic acid (Aux/IAA), ATAUX2-11
Functional annotation "domain confirmed by Pfam database, expressed in leaf, expression induced by IAA treatment" (PubMedID : 20499123)
OsIAA26 - Auxin-responsive Aux/IAA gene family member, expressed
UniProt C5X661
Pfam PF02309
Panther DB PTHR31734 PTHR31734:SF36
NCBI CDD -
KEGG Orthology K14484; auxin-responsive protein IAA
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0005634nucleus


Orthologs (automatic annotation)
TAIR AT5G43700 : AUX/IAA transcriptional regulator family protein
RAP-DB (Rice) LOC_Os09g35870.1 : OsIAA26 - Auxin-responsive Aux/IAA gene family member, expressed
MaizeGDB (Corn) Zm00025a047770 , Zm00025a030301
Brachypodium KQK02999 , KQJ91157 , KQK14081 , KQK14082 , KQK14083 , KQJ85960 , KQJ85961
Barley HORVU5Hr1G081180.1 , HORVU5Hr1G093580.6 , HORVU5Hr1G093580.7 , HORVU5Hr1G093580.4 , HORVU5Hr1G093580.2 , HORVU5Hr1G093580.3 , HORVU5Hr1G093580.8
Wheat TraesCS3D02G123400 , TraesCS5D02G323500 , TraesCS5A02G317200 , TraesCS5B02G058500 , TraesCS3A02G121300 , TraesCS3A02G121300 , TraesCS5D02G069300 , TraesCS5D02G388300 , TraesCS5D02G388300 , TraesCS5B02G381900 , TraesCS5B02G317800 , TraesCS5A02G378300 , TraesCS5A02G378300 , TraesCS3B02G140700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G206250 - -
2 Sobic.010G253250 - -
3 Sobic.005G014100 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.002G091700 MLO domain containing protein, putative, expressed K08472: mlo protein
5 Sobic.002G063566 - -
6 Sobic.001G277600 TKL_IRAK_DUF26-la.5 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.005G094400 DUF581 domain containing protein, expressed -
8 Sobic.005G062300 anthranilate phosphoribosyltransferase, putative, expressed -
9 Sobic.002G199200 No apical meristem protein, putative, expressed -
10 Sobic.001G218300 MATH domain containing protein, expressed -
11 Sobic.010G130400 SAM dependent carboxyl methyltransferase, putative, expressed K08241: jasmonate O-methyltransferase
12 Sobic.001G160500 phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
13 Sobic.004G121500 expansin precursor, putative, expressed -
14 Sobic.002G281100 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.002G417101 - -
16 Sobic.002G229400 OsSCP43 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
17 Sobic.004G264450 - -
18 Sobic.008G159200 - -
19 Sobic.005G048400 NBS-LRR disease resistance protein, putative, expressed K13457: RPM1, disease resistance protein RPM1
20 Sobic.006G004900 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase


Gene co-expression network
sample Sobic002G273400 Sobic002G273400 Sobic007G206250 Sobic007G206250 Sobic002G273400--Sobic007G206250 Sobic010G253250 Sobic010G253250 Sobic002G273400--Sobic010G253250 Sobic005G014100 Sobic005G014100 Sobic002G273400--Sobic005G014100 Sobic002G091700 Sobic002G091700 Sobic002G273400--Sobic002G091700 Sobic002G063566 Sobic002G063566 Sobic002G273400--Sobic002G063566 Sobic001G277600 Sobic001G277600 Sobic002G273400--Sobic001G277600 Sobic005G094400 Sobic005G094400 Sobic002G273400--Sobic005G094400 Sobic005G062300 Sobic005G062300 Sobic002G273400--Sobic005G062300 Sobic002G199200 Sobic002G199200 Sobic002G273400--Sobic002G199200 Sobic007G206250--Sobic002G273400 Sobic009G187150 Sobic009G187150 Sobic007G206250--Sobic009G187150 Sobic007G206250--Sobic010G253250 Sobic007G206250--Sobic002G091700 Sobic009G018200 Sobic009G018200 Sobic007G206250--Sobic009G018200 Sobic001G405450 Sobic001G405450 Sobic007G206250--Sobic001G405450 Sobic003G407950 Sobic003G407950 Sobic007G206250--Sobic003G407950 Sobic006G029250 Sobic006G029250 Sobic007G206250--Sobic006G029250 Sobic007G206250--Sobic002G063566 Sobic010G253250--Sobic005G062300 Sobic001G218300 Sobic001G218300 Sobic010G253250--Sobic001G218300 Sobic006G075650 Sobic006G075650 Sobic010G253250--Sobic006G075650 Sobic007G086400 Sobic007G086400 Sobic010G253250--Sobic007G086400 Sobic005G120466 Sobic005G120466 Sobic010G253250--Sobic005G120466 Sobic002G099500 Sobic002G099500 Sobic010G253250--Sobic002G099500 Sobic003G095301 Sobic003G095301 Sobic010G253250--Sobic003G095301 Sobic002G417101 Sobic002G417101 Sobic010G253250--Sobic002G417101 Sobic005G144900 Sobic005G144900 Sobic010G253250--Sobic005G144900 Sobic005G014100--Sobic001G218300 Sobic005G014100--Sobic005G062300 Sobic005G014100--Sobic006G075650 Sobic005G014100--Sobic010G253250 Sobic001G211101 Sobic001G211101 Sobic005G014100--Sobic001G211101 Sobic009G110300 Sobic009G110300 Sobic005G014100--Sobic009G110300 Sobic002G069700 Sobic002G069700 Sobic005G014100--Sobic002G069700 Sobic004G264450 Sobic004G264450 Sobic005G014100--Sobic004G264450 Sobic001G352100 Sobic001G352100 Sobic005G014100--Sobic001G352100 Sobic002G091700--Sobic005G094400 Sobic002G091700--Sobic002G063566 Sobic002G091700--Sobic010G253250 Sobic002G229400 Sobic002G229400 Sobic002G091700--Sobic002G229400 Sobic002G091700--Sobic005G062300 Sobic002G091700--Sobic002G417101 Sobic004G121500 Sobic004G121500 Sobic002G091700--Sobic004G121500 Sobic002G091700--Sobic005G014100 Sobic002G091700--Sobic002G273400 Sobic002G063566--Sobic005G094400 Sobic002G063566--Sobic002G091700 Sobic002G063566--Sobic010G253250 Sobic002G063566--Sobic005G062300 Sobic002G063566--Sobic006G075650 Sobic002G063566--Sobic002G417101 Sobic002G063566--Sobic005G014100 Sobic002G063566--Sobic004G121500 Sobic008G159200 Sobic008G159200 Sobic002G063566--Sobic008G159200 Sobic005G110514 Sobic005G110514 Sobic001G277600--Sobic005G110514 Sobic005G048400 Sobic005G048400 Sobic001G277600--Sobic005G048400 Sobic003G240500 Sobic003G240500 Sobic001G277600--Sobic003G240500 Sobic010G241700 Sobic010G241700 Sobic001G277600--Sobic010G241700 Sobic001G326400 Sobic001G326400 Sobic001G277600--Sobic001G326400 Sobic004G308500 Sobic004G308500 Sobic001G277600--Sobic004G308500 Sobic006G133200 Sobic006G133200 Sobic001G277600--Sobic006G133200 Sobic004G003100 Sobic004G003100 Sobic001G277600--Sobic004G003100 Sobic001G506500 Sobic001G506500 Sobic001G277600--Sobic001G506500 Sobic005G094400--Sobic002G063566 Sobic005G094400--Sobic002G091700 Sobic005G094400--Sobic010G253250 Sobic005G094400--Sobic002G417101 Sobic005G094400--Sobic005G062300 Sobic005G094400--Sobic004G121500 Sobic007G034650 Sobic007G034650 Sobic005G094400--Sobic007G034650 Sobic003G318500 Sobic003G318500 Sobic005G094400--Sobic003G318500 Sobic005G094400--Sobic006G075650 Sobic005G062300--Sobic006G075650 Sobic005G062300--Sobic001G211101 Sobic005G062300--Sobic001G218300 Sobic003G178101 Sobic003G178101 Sobic005G062300--Sobic003G178101 Sobic005G062300--Sobic005G120466 Sobic005G062300--Sobic002G099500 Sobic003G384650 Sobic003G384650 Sobic005G062300--Sobic003G384650 Sobic006G218050 Sobic006G218050 Sobic005G062300--Sobic006G218050 Sobic005G077666 Sobic005G077666 Sobic005G062300--Sobic005G077666 Sobic003G094700 Sobic003G094700 Sobic002G199200--Sobic003G094700 Sobic010G129000 Sobic010G129000 Sobic002G199200--Sobic010G129000 Sobic001G102000 Sobic001G102000 Sobic002G199200--Sobic001G102000 Sobic009G081700 Sobic009G081700 Sobic002G199200--Sobic009G081700 Sobic002G199200--Sobic002G273400 Sobic001G348200 Sobic001G348200 Sobic002G199200--Sobic001G348200 Sobic002G199200--Sobic003G240500 Sobic005G057100 Sobic005G057100 Sobic002G199200--Sobic005G057100 Sobic005G079400 Sobic005G079400 Sobic002G199200--Sobic005G079400
Octagon: transcription factors


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