Gene annotation
Transcriptome id Sobic.002G229400.1
Synonym scpl40, Sb02g026870
Functional annotation OsSCP43 - Putative Serine Carboxypeptidase homologue, expressed
UniProt C5X2X9
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF60
NCBI CDD -
KEGG Orthology K16297; serine carboxypeptidase-like clade II
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT3G63470 : serine carboxypeptidase-like 40
RAP-DB (Rice) LOC_Os09g28840.1 : OsSCP43 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) Zm00025a047302 , Zm00025a047301
Brachypodium KQJ85013 , KQK17647 , KQJ86054 , KQJ90551 , KQJ90550
Barley HORVU3Hr1G033560.2 , HORVU6Hr1G084770.10 , HORVU6Hr1G084770.11 , HORVU6Hr1G084770.12 , HORVU5Hr1G069470.4 , HORVU6Hr1G084770.14 , HORVU6Hr1G084770.15 , HORVU6Hr1G084770.16 , HORVU6Hr1G084770.17 , HORVU6Hr1G084770.13 , HORVU4Hr1G071940.3 , HORVU4Hr1G071940.2 , HORVU4Hr1G071940.1 , HORVU4Hr1G071940.5 , HORVU4Hr1G071940.4 , HORVU7Hr1G094190.1 , HORVU6Hr1G084770.8 , HORVU6Hr1G084770.9 , HORVU6Hr1G084770.6 , HORVU6Hr1G084770.7 , HORVU6Hr1G084770.4 , HORVU6Hr1G084770.5 , HORVU6Hr1G084770.2 , HORVU6Hr1G084770.3 , HORVU6Hr1G084770.1
Wheat TraesCS5A02G244800 , TraesCS3D02G174500 , TraesCS4D02G011600 , TraesCS5A02G244700 , TraesCS7A02G507800 , TraesCS5A02G245000 , TraesCS3B02G155800 , TraesCS7B02G301600 , TraesCS5B02G241700 , TraesCS7D02G395300 , TraesCS3B02G198000 , TraesCS7B02G416000 , TraesCS5D02G251700 , TraesCS3A02G138500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G091700 MLO domain containing protein, putative, expressed K08472: mlo protein
2 Sobic.008G168800 Jacalin-like lectin domain containing protein, putative, expressed -
3 Sobic.005G094400 DUF581 domain containing protein, expressed -
4 Sobic.002G063566 - -
5 Sobic.001G341400 nodulation-signaling pathway 1 protein, putative, expressed -
6 Sobic.004G003100 nodulin, putative, expressed -
7 Sobic.007G186700 resistance protein, putative, expressed -
8 Sobic.002G099100 S-RNase-binding protein, putative, expressed K19042: E3 ubiquitin-protein ligase BOI and related proteins
9 Sobic.009G233100 AP2 domain containing protein, expressed -
10 Sobic.005G162400 GATA transcription factor 25, putative, expressed -
11 Sobic.005G110514 - -
12 Sobic.010G013000 interacting protein of DMI3, putative, expressed -
13 Sobic.007G042600 "domain confirmed by Pfam database, expressed in leaf, flower, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@ABC transporter, ATP-binding protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
14 Sobic.005G220300 OsWAK123 - OsWAK receptor-like protein kinase, expressed -
15 Sobic.007G177400 OsFBX306 - F-box domain containing protein, expressed -
16 Sobic.002G273400 "domain confirmed by Pfam database, expressed in leaf, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA26 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
17 Sobic.004G002901 - K02940: RP-L9e, large subunit ribosomal protein L9e
18 Sobic.005G105700 beta,beta-carotene 9,10-dioxygenase, putative, expressed K17913: carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase
19 Sobic.002G028632 - -
20 Sobic.002G168800 carotenoid cleavage dioxygenase, putative, expressed -


Gene co-expression network
sample Sobic002G229400 Sobic002G229400 Sobic002G091700 Sobic002G091700 Sobic002G229400--Sobic002G091700 Sobic008G168800 Sobic008G168800 Sobic002G229400--Sobic008G168800 Sobic005G094400 Sobic005G094400 Sobic002G229400--Sobic005G094400 Sobic002G063566 Sobic002G063566 Sobic002G229400--Sobic002G063566 Sobic001G341400 Sobic001G341400 Sobic002G229400--Sobic001G341400 Sobic004G003100 Sobic004G003100 Sobic002G229400--Sobic004G003100 Sobic007G186700 Sobic007G186700 Sobic002G229400--Sobic007G186700 Sobic002G099100 Sobic002G099100 Sobic002G229400--Sobic002G099100 Sobic009G233100 Sobic009G233100 Sobic002G229400--Sobic009G233100 Sobic002G091700--Sobic005G094400 Sobic002G091700--Sobic002G063566 Sobic010G253250 Sobic010G253250 Sobic002G091700--Sobic010G253250 Sobic002G091700--Sobic002G229400 Sobic005G062300 Sobic005G062300 Sobic002G091700--Sobic005G062300 Sobic002G417101 Sobic002G417101 Sobic002G091700--Sobic002G417101 Sobic004G121500 Sobic004G121500 Sobic002G091700--Sobic004G121500 Sobic005G014100 Sobic005G014100 Sobic002G091700--Sobic005G014100 Sobic002G273400 Sobic002G273400 Sobic002G091700--Sobic002G273400 Sobic007G042600 Sobic007G042600 Sobic008G168800--Sobic007G042600 Sobic003G419200 Sobic003G419200 Sobic008G168800--Sobic003G419200 Sobic008G168800--Sobic007G186700 Sobic005G162400 Sobic005G162400 Sobic008G168800--Sobic005G162400 Sobic004G002901 Sobic004G002901 Sobic008G168800--Sobic004G002901 Sobic003G443700 Sobic003G443700 Sobic008G168800--Sobic003G443700 Sobic002G028632 Sobic002G028632 Sobic008G168800--Sobic002G028632 Sobic005G220300 Sobic005G220300 Sobic008G168800--Sobic005G220300 Sobic007G177400 Sobic007G177400 Sobic008G168800--Sobic007G177400 Sobic005G094400--Sobic002G063566 Sobic005G094400--Sobic002G091700 Sobic005G094400--Sobic010G253250 Sobic005G094400--Sobic002G417101 Sobic005G094400--Sobic005G062300 Sobic005G094400--Sobic004G121500 Sobic007G034650 Sobic007G034650 Sobic005G094400--Sobic007G034650 Sobic003G318500 Sobic003G318500 Sobic005G094400--Sobic003G318500 Sobic006G075650 Sobic006G075650 Sobic005G094400--Sobic006G075650 Sobic002G063566--Sobic005G094400 Sobic002G063566--Sobic002G091700 Sobic002G063566--Sobic010G253250 Sobic002G063566--Sobic005G062300 Sobic002G063566--Sobic006G075650 Sobic002G063566--Sobic002G417101 Sobic002G063566--Sobic005G014100 Sobic002G063566--Sobic004G121500 Sobic008G159200 Sobic008G159200 Sobic002G063566--Sobic008G159200 Sobic005G110514 Sobic005G110514 Sobic001G341400--Sobic005G110514 Sobic009G106100 Sobic009G106100 Sobic001G341400--Sobic009G106100 Sobic001G341400--Sobic004G003100 Sobic001G341400--Sobic004G002901 Sobic001G341400--Sobic007G186700 Sobic003G083800 Sobic003G083800 Sobic001G341400--Sobic003G083800 Sobic007G111800 Sobic007G111800 Sobic001G341400--Sobic007G111800 Sobic005G197400 Sobic005G197400 Sobic001G341400--Sobic005G197400 Sobic004G308500 Sobic004G308500 Sobic001G341400--Sobic004G308500 Sobic004G003100--Sobic005G110514 Sobic004G003100--Sobic009G233100 Sobic003G007400 Sobic003G007400 Sobic004G003100--Sobic003G007400 Sobic010G013000 Sobic010G013000 Sobic004G003100--Sobic010G013000 Sobic005G206000 Sobic005G206000 Sobic004G003100--Sobic005G206000 Sobic004G003100--Sobic004G308500 Sobic009G095800 Sobic009G095800 Sobic004G003100--Sobic009G095800 Sobic001G301000 Sobic001G301000 Sobic004G003100--Sobic001G301000 Sobic007G186500 Sobic007G186500 Sobic004G003100--Sobic007G186500 Sobic006G121000 Sobic006G121000 Sobic007G186700--Sobic006G121000 Sobic002G178200 Sobic002G178200 Sobic007G186700--Sobic002G178200 Sobic007G186700--Sobic004G002901 Sobic005G216400 Sobic005G216400 Sobic007G186700--Sobic005G216400 Sobic005G060200 Sobic005G060200 Sobic007G186700--Sobic005G060200 Sobic007G186700--Sobic007G111800 Sobic006G229901 Sobic006G229901 Sobic007G186700--Sobic006G229901 Sobic007G015000 Sobic007G015000 Sobic007G186700--Sobic007G015000 Sobic007G212000 Sobic007G212000 Sobic007G186700--Sobic007G212000 Sobic002G099100--Sobic002G229400 Sobic004G133100 Sobic004G133100 Sobic002G099100--Sobic004G133100 Sobic002G381200 Sobic002G381200 Sobic002G099100--Sobic002G381200 Sobic002G099100--Sobic008G168800 Sobic002G099100--Sobic007G186700 Sobic002G099100--Sobic001G341400 Sobic009G174300 Sobic009G174300 Sobic002G099100--Sobic009G174300 Sobic004G346300 Sobic004G346300 Sobic002G099100--Sobic004G346300 Sobic002G099100--Sobic004G002901 Sobic009G233100--Sobic004G003100 Sobic009G233100--Sobic005G110514 Sobic009G233100--Sobic004G308500 Sobic009G233100--Sobic005G206000 Sobic009G233100--Sobic001G301000 Sobic003G053200 Sobic003G053200 Sobic009G233100--Sobic003G053200 Sobic010G031700 Sobic010G031700 Sobic009G233100--Sobic010G031700 Sobic007G037600 Sobic007G037600 Sobic009G233100--Sobic007G037600 Sobic006G277700 Sobic006G277700 Sobic009G233100--Sobic006G277700
Octagon: transcription factors


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