Gene annotation
Transcriptome id Sobic.002G289900.2,Sobic.002G289900.1
Synonym Sb02g032145
Functional annotation carbohydrate binding protein, putative, expressed
UniProt A0A1B6QDZ9 , A0A1W0W663
Pfam PF00954 PF08276 PF01453 PF07714 PF08276 PF01453 PF07714
Panther DB PTHR27002 PTHR27002:SF61
NCBI CDD KOG1187; Serine/threonine protein kinase KOG0984Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 KOG2345Serine/threonine protein kinase/TGF-beta stimulated factor
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G61610 : S-locus lectin protein kinase family protein
RAP-DB (Rice) LOC_Os09g37800.1,LOC_Os09g37840.1 : serine/threonine kinase, putative, expressed,carbohydrate binding protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT61172
Barley HORVU5Hr1G087040.3 , HORVU5Hr1G087040.1 , HORVU5Hr1G087040.6 , HORVU5Hr1G087040.7 , HORVU5Hr1G087040.4 , HORVU5Hr1G087040.5 , HORVU5Hr1G087040.8 , HORVU0Hr1G014650.2 , HORVU0Hr1G014650.3 , HORVU3Hr1G038690.1 , HORVU3Hr1G077220.18 , HORVU3Hr1G077220.17 , HORVU3Hr1G077220.16 , HORVU3Hr1G077220.12 , HORVU3Hr1G077220.11 , HORVU3Hr1G077220.10 , HORVU5Hr1G124170.2 , HORVU5Hr1G124170.3 , HORVU5Hr1G124170.1 , HORVU3Hr1G077220.7 , HORVU3Hr1G077220.4 , HORVU6Hr1G090830.4 , HORVU6Hr1G090830.3 , HORVU3Hr1G077220.6 , HORVU3Hr1G077220.5 , HORVU3Hr1G077220.2 , HORVU3Hr1G077220.1 , HORVU3Hr1G077220.9 , HORVU3Hr1G077220.8 , HORVU0Hr1G014650.1
Wheat TraesCS5B02G353400 , TraesCS3A02G323700 , TraesCS3A02G323700 , TraesCS1D02G330300 , TraesCS1B02G341600 , TraesCS1D02G330300 , TraesCS1D02G330300 , TraesCS5D02G357800 , TraesCS3B02G352900 , TraesCS3B02G352900 , TraesCS3B02G352900
Populus PNT39239 , PNT39238 , PNT59509 , PNT59508


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G111500 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
2 Sobic.010G135800 ZOS6-04 - C2H2 zinc finger protein, expressed -
3 Sobic.003G342800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ankyrin homolog precursor, putative, expressed -
4 Sobic.002G267300 expressed protein -
5 Sobic.004G216100 cysteine proteinase inhibitor precursor, putative, expressed -
6 Sobic.002G352900 DEFL49 - Defensin and Defensin-like DEFL family, expressed -
7 Sobic.001G022000 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
8 Sobic.003G187800 desaturase/cytochrome b5 protein, putative, expressed K13076: sphingolipid 8-(E)-desaturase
9 Sobic.003G289300 3-5 exonuclease domain-containing protein, putative, expressed -
10 Sobic.005G040950 - -
11 Sobic.001G241500 MBTB52 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
12 Sobic.007G090418 - -
13 Sobic.002G076200 - -
14 Sobic.001G437600 - -
15 Sobic.003G339400 RING-H2 finger protein ATL5G, putative, expressed -
16 Sobic.005G219800 - -
17 Sobic.008G024000 expressed protein -
18 Sobic.002G237600 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
19 Sobic.007G072200 - -
20 Sobic.005G205000 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20


Gene co-expression network
sample Sobic002G289900 Sobic002G289900 Sobic010G111500 Sobic010G111500 Sobic002G289900--Sobic010G111500 Sobic010G135800 Sobic010G135800 Sobic002G289900--Sobic010G135800 Sobic003G342800 Sobic003G342800 Sobic002G289900--Sobic003G342800 Sobic002G267300 Sobic002G267300 Sobic002G289900--Sobic002G267300 Sobic004G216100 Sobic004G216100 Sobic002G289900--Sobic004G216100 Sobic002G352900 Sobic002G352900 Sobic002G289900--Sobic002G352900 Sobic001G022000 Sobic001G022000 Sobic002G289900--Sobic001G022000 Sobic003G187800 Sobic003G187800 Sobic002G289900--Sobic003G187800 Sobic003G289300 Sobic003G289300 Sobic002G289900--Sobic003G289300 Sobic007G090418 Sobic007G090418 Sobic010G111500--Sobic007G090418 Sobic010G111500--Sobic001G022000 Sobic002G078600 Sobic002G078600 Sobic010G111500--Sobic002G078600 Sobic003G391700 Sobic003G391700 Sobic010G111500--Sobic003G391700 Sobic010G111500--Sobic002G352900 Sobic002G303950 Sobic002G303950 Sobic010G111500--Sobic002G303950 Sobic004G139400 Sobic004G139400 Sobic010G111500--Sobic004G139400 Sobic008G024000 Sobic008G024000 Sobic010G111500--Sobic008G024000 Sobic002G018166 Sobic002G018166 Sobic010G111500--Sobic002G018166 Sobic010G135800--Sobic002G352900 Sobic002G237600 Sobic002G237600 Sobic010G135800--Sobic002G237600 Sobic003G407400 Sobic003G407400 Sobic010G135800--Sobic003G407400 Sobic009G174833 Sobic009G174833 Sobic010G135800--Sobic009G174833 Sobic004G173900 Sobic004G173900 Sobic010G135800--Sobic004G173900 Sobic004G200501 Sobic004G200501 Sobic010G135800--Sobic004G200501 Sobic007G201300 Sobic007G201300 Sobic010G135800--Sobic007G201300 Sobic010G135800--Sobic008G024000 Sobic009G224900 Sobic009G224900 Sobic010G135800--Sobic009G224900 Sobic003G342800--Sobic010G135800 Sobic001G509800 Sobic001G509800 Sobic003G342800--Sobic001G509800 Sobic003G342800--Sobic001G022000 Sobic003G342800--Sobic002G289900 Sobic007G193500 Sobic007G193500 Sobic003G342800--Sobic007G193500 Sobic004G130001 Sobic004G130001 Sobic003G342800--Sobic004G130001 Sobic003G342800--Sobic002G267300 Sobic003G342800--Sobic004G216100 Sobic006G069400 Sobic006G069400 Sobic003G342800--Sobic006G069400 Sobic002G267300--Sobic001G022000 Sobic002G267300--Sobic008G024000 Sobic005G205000 Sobic005G205000 Sobic002G267300--Sobic005G205000 Sobic001G482500 Sobic001G482500 Sobic002G267300--Sobic001G482500 Sobic002G267300--Sobic007G090418 Sobic002G384800 Sobic002G384800 Sobic002G267300--Sobic002G384800 Sobic007G193900 Sobic007G193900 Sobic002G267300--Sobic007G193900 Sobic002G267300--Sobic007G193500 Sobic002G067050 Sobic002G067050 Sobic002G267300--Sobic002G067050 Sobic003G009650 Sobic003G009650 Sobic004G216100--Sobic003G009650 Sobic004G216100--Sobic002G267300 Sobic001G163732 Sobic001G163732 Sobic004G216100--Sobic001G163732 Sobic006G006200 Sobic006G006200 Sobic004G216100--Sobic006G006200 Sobic004G216100--Sobic002G067050 Sobic004G216100--Sobic002G237600 Sobic002G312100 Sobic002G312100 Sobic004G216100--Sobic002G312100 Sobic004G216100--Sobic007G193500 Sobic002G085700 Sobic002G085700 Sobic004G216100--Sobic002G085700 Sobic002G352900--Sobic003G407400 Sobic001G060001 Sobic001G060001 Sobic002G352900--Sobic001G060001 Sobic010G146350 Sobic010G146350 Sobic002G352900--Sobic010G146350 Sobic003G120050 Sobic003G120050 Sobic002G352900--Sobic003G120050 Sobic007G120600 Sobic007G120600 Sobic002G352900--Sobic007G120600 Sobic005G207600 Sobic005G207600 Sobic002G352900--Sobic005G207600 Sobic002G352900--Sobic008G024000 Sobic004G052700 Sobic004G052700 Sobic002G352900--Sobic004G052700 Sobic008G096401 Sobic008G096401 Sobic002G352900--Sobic008G096401 Sobic001G022000--Sobic003G391700 Sobic001G022000--Sobic008G024000 Sobic001G022000--Sobic007G090418 Sobic001G022000--Sobic002G237600 Sobic006G163066 Sobic006G163066 Sobic001G022000--Sobic006G163066 Sobic003G326100 Sobic003G326100 Sobic001G022000--Sobic003G326100 Sobic008G078966 Sobic008G078966 Sobic001G022000--Sobic008G078966 Sobic001G022000--Sobic002G067050 Sobic001G022000--Sobic002G078600 Sobic002G249400 Sobic002G249400 Sobic003G187800--Sobic002G249400 Sobic004G342700 Sobic004G342700 Sobic003G187800--Sobic004G342700 Sobic006G246800 Sobic006G246800 Sobic003G187800--Sobic006G246800 Sobic003G014832 Sobic003G014832 Sobic003G187800--Sobic003G014832 Sobic001G121000 Sobic001G121000 Sobic003G187800--Sobic001G121000 Sobic004G355101 Sobic004G355101 Sobic003G187800--Sobic004G355101 Sobic008G176401 Sobic008G176401 Sobic003G187800--Sobic008G176401 Sobic006G035950 Sobic006G035950 Sobic003G187800--Sobic006G035950 Sobic009G142700 Sobic009G142700 Sobic003G187800--Sobic009G142700 Sobic005G040950 Sobic005G040950 Sobic003G289300--Sobic005G040950 Sobic003G339400 Sobic003G339400 Sobic003G289300--Sobic003G339400 Sobic007G119400 Sobic007G119400 Sobic003G289300--Sobic007G119400 Sobic001G437600 Sobic001G437600 Sobic003G289300--Sobic001G437600 Sobic005G219800 Sobic005G219800 Sobic003G289300--Sobic005G219800 Sobic001G241500 Sobic001G241500 Sobic003G289300--Sobic001G241500 Sobic002G076200 Sobic002G076200 Sobic003G289300--Sobic002G076200 Sobic009G258200 Sobic009G258200 Sobic003G289300--Sobic009G258200 Sobic010G051900 Sobic010G051900 Sobic003G289300--Sobic010G051900
Octagon: transcription factors


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