Gene annotation
Transcriptome id Sobic.003G342800.1
Synonym Sb03g038690
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
ankyrin homolog precursor, putative, expressed
UniProt C5XNY4
Pfam PF00635 PF12796 PF13857
Panther DB PTHR24198
NCBI CDD KOG4412; 26S proteasome regulatory complex, subunit PSMD10 KOG0502Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate)
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G02620 : ankyrin-like1
RAP-DB (Rice) LOC_Os01g61330.1 : ankyrin homolog precursor, putative, expressed
MaizeGDB (Corn) Zm00025a039738
Brachypodium KQK10402
Barley HORVU3Hr1G087970.4 , HORVU3Hr1G087970.1 , HORVU3Hr1G087970.2 , HORVU3Hr1G087970.3
Wheat TraesCS3B02G381300 , TraesCS3A02G349100 , TraesCS3A02G349100 , TraesCS3D02G343000
Populus -


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cDNA sequences
Sobic.003G342800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G135800 ZOS6-04 - C2H2 zinc finger protein, expressed -
2 Sobic.001G509800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cysteine-rich repeat secretory protein precursor, putative, expressed -
3 Sobic.001G022000 hydrolase, putative, expressed K14664: IAA-amino acid hydrolase
4 Sobic.002G289900 carbohydrate binding protein, putative, expressed -
5 Sobic.007G193500 Highest expression level in primordial inflorescence(PubMedID : 27501690)@"GW8/OsPL16(Ortholog in rice:Wang et al., 2012)"(PubMedID : 31659910)@OsSPL16 - SBP-box gene family member, expressed -
6 Sobic.004G130001 - K08775: BRCA2, breast cancer 2 susceptibility protein
7 Sobic.002G267300 expressed protein -
8 Sobic.004G216100 cysteine proteinase inhibitor precursor, putative, expressed -
9 Sobic.006G069400 expressed protein -
10 Sobic.003G212800 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
11 Sobic.002G237600 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
12 Sobic.001G482500 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
13 Sobic.002G352900 DEFL49 - Defensin and Defensin-like DEFL family, expressed -
14 Sobic.010G111500 myb-like DNA-binding domain, SHAQKYF class family protein, expressed -
15 Sobic.009G224900 ribosomal protein L7/L12 C-terminal domain containing protein, expressed K02935: RP-L7, MRPL12, large subunit ribosomal protein L7/L12
16 Sobic.002G384800 pentatricopeptide, putative, expressed -
17 Sobic.005G085800 expressed protein -
18 Sobic.002G085700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
19 Sobic.008G045232 - -
20 Sobic.005G205000 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20


Gene co-expression network
sample Sobic003G342800 Sobic003G342800 Sobic010G135800 Sobic010G135800 Sobic003G342800--Sobic010G135800 Sobic001G509800 Sobic001G509800 Sobic003G342800--Sobic001G509800 Sobic001G022000 Sobic001G022000 Sobic003G342800--Sobic001G022000 Sobic002G289900 Sobic002G289900 Sobic003G342800--Sobic002G289900 Sobic007G193500 Sobic007G193500 Sobic003G342800--Sobic007G193500 Sobic004G130001 Sobic004G130001 Sobic003G342800--Sobic004G130001 Sobic002G267300 Sobic002G267300 Sobic003G342800--Sobic002G267300 Sobic004G216100 Sobic004G216100 Sobic003G342800--Sobic004G216100 Sobic006G069400 Sobic006G069400 Sobic003G342800--Sobic006G069400 Sobic002G352900 Sobic002G352900 Sobic010G135800--Sobic002G352900 Sobic002G237600 Sobic002G237600 Sobic010G135800--Sobic002G237600 Sobic003G407400 Sobic003G407400 Sobic010G135800--Sobic003G407400 Sobic009G174833 Sobic009G174833 Sobic010G135800--Sobic009G174833 Sobic004G173900 Sobic004G173900 Sobic010G135800--Sobic004G173900 Sobic004G200501 Sobic004G200501 Sobic010G135800--Sobic004G200501 Sobic007G201300 Sobic007G201300 Sobic010G135800--Sobic007G201300 Sobic008G024000 Sobic008G024000 Sobic010G135800--Sobic008G024000 Sobic009G224900 Sobic009G224900 Sobic010G135800--Sobic009G224900 Sobic001G509800--Sobic004G130001 Sobic001G509800--Sobic003G342800 Sobic004G162600 Sobic004G162600 Sobic001G509800--Sobic004G162600 Sobic004G244500 Sobic004G244500 Sobic001G509800--Sobic004G244500 Sobic001G509800--Sobic007G193500 Sobic010G196200 Sobic010G196200 Sobic001G509800--Sobic010G196200 Sobic001G509800--Sobic006G069400 Sobic001G086100 Sobic001G086100 Sobic001G509800--Sobic001G086100 Sobic001G003300 Sobic001G003300 Sobic001G509800--Sobic001G003300 Sobic003G391700 Sobic003G391700 Sobic001G022000--Sobic003G391700 Sobic001G022000--Sobic008G024000 Sobic007G090418 Sobic007G090418 Sobic001G022000--Sobic007G090418 Sobic001G022000--Sobic002G237600 Sobic006G163066 Sobic006G163066 Sobic001G022000--Sobic006G163066 Sobic003G326100 Sobic003G326100 Sobic001G022000--Sobic003G326100 Sobic008G078966 Sobic008G078966 Sobic001G022000--Sobic008G078966 Sobic002G067050 Sobic002G067050 Sobic001G022000--Sobic002G067050 Sobic002G078600 Sobic002G078600 Sobic001G022000--Sobic002G078600 Sobic010G111500 Sobic010G111500 Sobic002G289900--Sobic010G111500 Sobic002G289900--Sobic010G135800 Sobic002G289900--Sobic003G342800 Sobic002G289900--Sobic002G267300 Sobic002G289900--Sobic004G216100 Sobic002G289900--Sobic002G352900 Sobic002G289900--Sobic001G022000 Sobic003G187800 Sobic003G187800 Sobic002G289900--Sobic003G187800 Sobic003G289300 Sobic003G289300 Sobic002G289900--Sobic003G289300 Sobic008G045232 Sobic008G045232 Sobic007G193500--Sobic008G045232 Sobic005G085800 Sobic005G085800 Sobic007G193500--Sobic005G085800 Sobic002G289701 Sobic002G289701 Sobic007G193500--Sobic002G289701 Sobic008G053000 Sobic008G053000 Sobic007G193500--Sobic008G053000 Sobic005G030200 Sobic005G030200 Sobic007G193500--Sobic005G030200 Sobic001G152500 Sobic001G152500 Sobic007G193500--Sobic001G152500 Sobic001G189800 Sobic001G189800 Sobic007G193500--Sobic001G189800 Sobic007G007650 Sobic007G007650 Sobic007G193500--Sobic007G007650 Sobic001G482500 Sobic001G482500 Sobic007G193500--Sobic001G482500 Sobic002G188200 Sobic002G188200 Sobic004G130001--Sobic002G188200 Sobic004G130001--Sobic001G003300 Sobic004G130001--Sobic010G196200 Sobic008G045300 Sobic008G045300 Sobic004G130001--Sobic008G045300 Sobic004G328800 Sobic004G328800 Sobic004G130001--Sobic004G328800 Sobic004G130001--Sobic002G237600 Sobic008G175933 Sobic008G175933 Sobic004G130001--Sobic008G175933 Sobic004G130001--Sobic002G289701 Sobic004G130001--Sobic007G193500 Sobic002G267300--Sobic001G022000 Sobic002G267300--Sobic008G024000 Sobic005G205000 Sobic005G205000 Sobic002G267300--Sobic005G205000 Sobic002G267300--Sobic001G482500 Sobic002G267300--Sobic007G090418 Sobic002G384800 Sobic002G384800 Sobic002G267300--Sobic002G384800 Sobic007G193900 Sobic007G193900 Sobic002G267300--Sobic007G193900 Sobic002G267300--Sobic007G193500 Sobic002G267300--Sobic002G067050 Sobic003G009650 Sobic003G009650 Sobic004G216100--Sobic003G009650 Sobic004G216100--Sobic002G267300 Sobic001G163732 Sobic001G163732 Sobic004G216100--Sobic001G163732 Sobic006G006200 Sobic006G006200 Sobic004G216100--Sobic006G006200 Sobic004G216100--Sobic002G067050 Sobic004G216100--Sobic002G237600 Sobic002G312100 Sobic002G312100 Sobic004G216100--Sobic002G312100 Sobic004G216100--Sobic007G193500 Sobic002G085700 Sobic002G085700 Sobic004G216100--Sobic002G085700 Sobic003G212800 Sobic003G212800 Sobic006G069400--Sobic003G212800 Sobic006G069400--Sobic007G193500 Sobic009G133100 Sobic009G133100 Sobic006G069400--Sobic009G133100 Sobic006G069400--Sobic001G022000 Sobic006G069400--Sobic005G030200 Sobic006G069400--Sobic008G045232 Sobic006G069400--Sobic005G085800 Sobic006G069400--Sobic002G289701 Sobic009G196100 Sobic009G196100 Sobic006G069400--Sobic009G196100
Octagon: transcription factors


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