Gene annotation
Transcriptome id Sobic.002G384000.1
Synonym Sb02g040030
Functional annotation expressed protein
UniProt C5X2M0
Pfam -
Panther DB PTHR35296 PTHR35296:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G35290 : -
RAP-DB (Rice) LOC_Os07g43450.1 : expressed protein
MaizeGDB (Corn) Zm00025a048831
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G159100 exostosin family domain containing protein, expressed -
2 Sobic.001G455700 ATMAP70 protein, putative, expressed -
3 Sobic.008G110200 OsWLIM1 - LIM domain protein, putative actin-binding protein and transcription factor, expressed K09377: cysteine and glycine-rich protein
4 Sobic.003G316000 expressed protein -
5 Sobic.010G180100 transferase family protein, putative, expressed -
6 Sobic.001G364400 cytochrome P450, putative, expressed -
7 Sobic.001G256000 expressed protein -
8 Sobic.001G452200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Caleosin-related family protein("PubMedID : 26759170,PubMedID : 24597475")@caleosin related protein, putative, expressed K17991: peroxygenase
9 Sobic.001G409100 glycosyltransferase family 43 protein, putative, expressed -
10 Sobic.003G128900 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
12 Sobic.001G360800 cytochrome P450, putative, expressed K13083: flavonoid 3',5'-hydroxylase
13 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
14 Sobic.006G074200 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@"uncharacterized lipid transporters, up-regulated under drought stress, mapped into a QTL involved in stay green (QSTG18_3)"(PubMedID : 24655390)@LTPL102 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
15 Sobic.002G416500 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.009G220100 exostosin family domain containing protein, expressed -
17 Sobic.004G261400 xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
18 Sobic.002G374650 -(PubMedID : 26976818) K11517: (S)-2-hydroxy-acid oxidase
19 Sobic.002G318100 expressed protein -
20 Sobic.002G365600 igA FC receptor precursor, putative, expressed -


Gene co-expression network
sample Sobic002G384000 Sobic002G384000 Sobic004G159100 Sobic004G159100 Sobic002G384000--Sobic004G159100 Sobic001G455700 Sobic001G455700 Sobic002G384000--Sobic001G455700 Sobic008G110200 Sobic008G110200 Sobic002G384000--Sobic008G110200 Sobic003G316000 Sobic003G316000 Sobic002G384000--Sobic003G316000 Sobic010G180100 Sobic010G180100 Sobic002G384000--Sobic010G180100 Sobic001G364400 Sobic001G364400 Sobic002G384000--Sobic001G364400 Sobic001G256000 Sobic001G256000 Sobic002G384000--Sobic001G256000 Sobic001G452200 Sobic001G452200 Sobic002G384000--Sobic001G452200 Sobic001G409100 Sobic001G409100 Sobic002G384000--Sobic001G409100 Sobic004G159100--Sobic002G384000 Sobic004G159100--Sobic001G452200 Sobic002G107400 Sobic002G107400 Sobic004G159100--Sobic002G107400 Sobic010G170300 Sobic010G170300 Sobic004G159100--Sobic010G170300 Sobic008G043500 Sobic008G043500 Sobic004G159100--Sobic008G043500 Sobic004G159100--Sobic010G180100 Sobic002G374650 Sobic002G374650 Sobic004G159100--Sobic002G374650 Sobic003G015200 Sobic003G015200 Sobic004G159100--Sobic003G015200 Sobic001G026300 Sobic001G026300 Sobic004G159100--Sobic001G026300 Sobic001G455700--Sobic003G316000 Sobic001G434300 Sobic001G434300 Sobic001G455700--Sobic001G434300 Sobic001G082600 Sobic001G082600 Sobic001G455700--Sobic001G082600 Sobic007G176000 Sobic007G176000 Sobic001G455700--Sobic007G176000 Sobic001G494000 Sobic001G494000 Sobic001G455700--Sobic001G494000 Sobic008G106700 Sobic008G106700 Sobic001G455700--Sobic008G106700 Sobic007G176100 Sobic007G176100 Sobic001G455700--Sobic007G176100 Sobic006G044100 Sobic006G044100 Sobic001G455700--Sobic006G044100 Sobic002G318100 Sobic002G318100 Sobic001G455700--Sobic002G318100 Sobic004G221300 Sobic004G221300 Sobic008G110200--Sobic004G221300 Sobic008G110200--Sobic001G409100 Sobic001G038300 Sobic001G038300 Sobic008G110200--Sobic001G038300 Sobic008G110200--Sobic010G180100 Sobic009G048000 Sobic009G048000 Sobic008G110200--Sobic009G048000 Sobic006G148800 Sobic006G148800 Sobic008G110200--Sobic006G148800 Sobic001G418100 Sobic001G418100 Sobic008G110200--Sobic001G418100 Sobic008G141200 Sobic008G141200 Sobic008G110200--Sobic008G141200 Sobic009G016100 Sobic009G016100 Sobic008G110200--Sobic009G016100 Sobic003G016100 Sobic003G016100 Sobic003G316000--Sobic003G016100 Sobic003G079400 Sobic003G079400 Sobic003G316000--Sobic003G079400 Sobic006G150700 Sobic006G150700 Sobic003G316000--Sobic006G150700 Sobic004G046200 Sobic004G046200 Sobic003G316000--Sobic004G046200 Sobic007G178900 Sobic007G178900 Sobic003G316000--Sobic007G178900 Sobic003G316000--Sobic002G318100 Sobic003G316000--Sobic007G176000 Sobic009G035300 Sobic009G035300 Sobic003G316000--Sobic009G035300 Sobic004G042000 Sobic004G042000 Sobic003G316000--Sobic004G042000 Sobic010G131400 Sobic010G131400 Sobic010G180100--Sobic010G131400 Sobic002G254900 Sobic002G254900 Sobic010G180100--Sobic002G254900 Sobic002G167600 Sobic002G167600 Sobic010G180100--Sobic002G167600 Sobic001G360700 Sobic001G360700 Sobic010G180100--Sobic001G360700 Sobic001G002800 Sobic001G002800 Sobic010G180100--Sobic001G002800 Sobic001G224300 Sobic001G224300 Sobic010G180100--Sobic001G224300 Sobic010G180100--Sobic001G409100 Sobic004G047600 Sobic004G047600 Sobic010G180100--Sobic004G047600 Sobic003G387500 Sobic003G387500 Sobic010G180100--Sobic003G387500 Sobic002G365600 Sobic002G365600 Sobic001G364400--Sobic002G365600 Sobic006G074200 Sobic006G074200 Sobic001G364400--Sobic006G074200 Sobic002G365500 Sobic002G365500 Sobic001G364400--Sobic002G365500 Sobic003G269500 Sobic003G269500 Sobic001G364400--Sobic003G269500 Sobic006G183900 Sobic006G183900 Sobic001G364400--Sobic006G183900 Sobic008G172500 Sobic008G172500 Sobic001G364400--Sobic008G172500 Sobic010G271200 Sobic010G271200 Sobic001G364400--Sobic010G271200 Sobic001G364400--Sobic006G150700 Sobic001G364400--Sobic002G318100 Sobic001G256000--Sobic006G150700 Sobic001G256000--Sobic002G318100 Sobic001G256000--Sobic001G364400 Sobic001G256000--Sobic003G316000 Sobic005G063300 Sobic005G063300 Sobic001G256000--Sobic005G063300 Sobic001G256000--Sobic002G365500 Sobic002G368300 Sobic002G368300 Sobic001G256000--Sobic002G368300 Sobic003G053500 Sobic003G053500 Sobic001G256000--Sobic003G053500 Sobic006G046900 Sobic006G046900 Sobic001G256000--Sobic006G046900 Sobic009G006500 Sobic009G006500 Sobic001G452200--Sobic009G006500 Sobic001G452200--Sobic003G015200 Sobic007G058600 Sobic007G058600 Sobic001G452200--Sobic007G058600 Sobic009G015500 Sobic009G015500 Sobic001G452200--Sobic009G015500 Sobic001G452200--Sobic002G107400 Sobic006G181900 Sobic006G181900 Sobic001G452200--Sobic006G181900 Sobic002G416500 Sobic002G416500 Sobic001G452200--Sobic002G416500 Sobic010G070750 Sobic010G070750 Sobic001G452200--Sobic010G070750 Sobic004G308300 Sobic004G308300 Sobic001G452200--Sobic004G308300 Sobic002G396400 Sobic002G396400 Sobic001G409100--Sobic002G396400 Sobic003G410800 Sobic003G410800 Sobic001G409100--Sobic003G410800 Sobic001G409100--Sobic004G221300 Sobic006G036400 Sobic006G036400 Sobic001G409100--Sobic006G036400 Sobic001G409100--Sobic001G418100 Sobic001G409100--Sobic001G224300 Sobic001G409100--Sobic001G038300 Sobic001G409100--Sobic010G180100 Sobic009G220100 Sobic009G220100 Sobic001G409100--Sobic009G220100
Octagon: transcription factors


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