Gene annotation
Transcriptome id Sobic.002G429000.2
Synonym Sb02g043900
Functional annotation pyruvate decarboxylase isozyme 2, putative, expressed
UniProt A0A1W0W881
Pfam PF02775 PF02776
Panther DB PTHR18968 PTHR18968:SF139
NCBI CDD -
KEGG Orthology K01568; PDC, pyruvate decarboxylase
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT5G01320 : Thiamine pyrophosphate dependent pyruvate decarboxylase family protein
RAP-DB (Rice) LOC_Os07g49250.1 : thiamine pyrophosphate enzyme, C-terminal TPP binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049263 , Zm00025a037766 , Zm00025a002003
Brachypodium PNT77590 , KQK14495
Barley HORVU2Hr1G012650.2 , HORVU2Hr1G014360.1 , HORVU2Hr1G012650.1 , HORVU4Hr1G056050.8 , HORVU4Hr1G056050.9 , HORVU2Hr1G012660.3 , HORVU2Hr1G012660.2 , HORVU2Hr1G012660.1 , HORVU4Hr1G056050.2 , HORVU4Hr1G056050.3 , HORVU4Hr1G056050.1 , HORVU4Hr1G056050.6 , HORVU4Hr1G056050.7 , HORVU4Hr1G056050.4 , HORVU4Hr1G056050.5 , HORVU2Hr1G014390.4 , HORVU2Hr1G014390.1 , HORVU2Hr1G014390.3 , HORVU2Hr1G014390.2
Wheat TraesCS2A02G088400 , TraesCS2A02G088600 , TraesCS4B02G193200 , TraesCSU02G014800 , TraesCS2B02G103900 , TraesCS4B02G193200 , TraesCS4D02G194200 , TraesCS4D02G194200 , TraesCS4A02G110900 , TraesCS4A02G110900 , TraesCS2D02G086100 , TraesCS2D02G086300 , TraesCS2D02G086000 , TraesCS2B02G583600 , TraesCS2B02G583600 , TraesCS2B02G104000 , TraesCS2A02G552200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G210150 - -
2 Sobic.005G192000 receptor kinase, putative, expressed -
3 Sobic.010G034200 pectate lyase precursor, putative, expressed K01728: pectate lyase
4 Sobic.009G227500 aspartyl protease family protein, putative, expressed -
5 Sobic.006G219700 nitrate-induced NOI protein, expressed -
6 Sobic.009G259600 aspartyl protease family protein, putative, expressed -
7 Sobic.001G400400 pectinesterase, putative, expressed K01051: pectinesterase
8 Sobic.006G176200 OsSub43 - Putative Subtilisin homologue, expressed -
9 Sobic.002G395100 DEF8 - Defensin and Defensin-like DEFL family, expressed -
10 Sobic.001G473700 OsSCP11 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
11 Sobic.004G318300 endoglucanase, putative, expressed K01179: endoglucanase
12 Sobic.009G087200 AGC_PVPK_like_kin82y.12 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
13 Sobic.003G027300 RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
14 Sobic.003G274100 THION44 - Plant thionin family protein precursor, putative, expressed -
15 Sobic.009G253700 phosphatidylinositol 3- and 4-kinase family protein, putative, expressed -
16 Sobic.006G071096 - -
17 Sobic.006G234400 DUF617 domain containing protein, expressed -
18 Sobic.009G166000 IQ calmodulin-binding motif domain containing protein, expressed -
19 Sobic.007G185801 - -
20 Sobic.008G043400 - -


Gene co-expression network
sample Sobic002G429000 Sobic002G429000 Sobic002G210150 Sobic002G210150 Sobic002G429000--Sobic002G210150 Sobic005G192000 Sobic005G192000 Sobic002G429000--Sobic005G192000 Sobic010G034200 Sobic010G034200 Sobic002G429000--Sobic010G034200 Sobic009G227500 Sobic009G227500 Sobic002G429000--Sobic009G227500 Sobic006G219700 Sobic006G219700 Sobic002G429000--Sobic006G219700 Sobic009G259600 Sobic009G259600 Sobic002G429000--Sobic009G259600 Sobic001G400400 Sobic001G400400 Sobic002G429000--Sobic001G400400 Sobic006G176200 Sobic006G176200 Sobic002G429000--Sobic006G176200 Sobic002G395100 Sobic002G395100 Sobic002G429000--Sobic002G395100 Sobic002G210150--Sobic005G192000 Sobic002G210150--Sobic010G034200 Sobic002G210150--Sobic006G219700 Sobic002G210150--Sobic001G400400 Sobic002G210150--Sobic009G227500 Sobic002G210150--Sobic002G395100 Sobic002G210150--Sobic009G259600 Sobic002G210150--Sobic002G429000 Sobic009G166000 Sobic009G166000 Sobic002G210150--Sobic009G166000 Sobic005G192000--Sobic002G210150 Sobic002G323200 Sobic002G323200 Sobic005G192000--Sobic002G323200 Sobic005G192000--Sobic010G034200 Sobic005G192000--Sobic002G429000 Sobic005G192000--Sobic009G166000 Sobic005G192000--Sobic009G227500 Sobic004G331500 Sobic004G331500 Sobic005G192000--Sobic004G331500 Sobic005G192000--Sobic001G400400 Sobic005G209300 Sobic005G209300 Sobic005G192000--Sobic005G209300 Sobic010G034200--Sobic001G400400 Sobic010G034200--Sobic009G227500 Sobic010G034200--Sobic002G395100 Sobic010G034200--Sobic006G219700 Sobic007G061800 Sobic007G061800 Sobic010G034200--Sobic007G061800 Sobic008G075800 Sobic008G075800 Sobic010G034200--Sobic008G075800 Sobic006G234400 Sobic006G234400 Sobic010G034200--Sobic006G234400 Sobic010G034200--Sobic009G259600 Sobic001G222800 Sobic001G222800 Sobic010G034200--Sobic001G222800 Sobic009G227500--Sobic001G400400 Sobic009G227500--Sobic010G034200 Sobic009G227500--Sobic007G061800 Sobic009G227500--Sobic002G395100 Sobic009G227500--Sobic008G075800 Sobic009G227500--Sobic001G222800 Sobic009G227500--Sobic006G234400 Sobic010G177600 Sobic010G177600 Sobic009G227500--Sobic010G177600 Sobic009G227500--Sobic006G219700 Sobic006G219700--Sobic009G259600 Sobic006G219700--Sobic002G395100 Sobic004G318300 Sobic004G318300 Sobic006G219700--Sobic004G318300 Sobic008G043400 Sobic008G043400 Sobic006G219700--Sobic008G043400 Sobic003G027300 Sobic003G027300 Sobic006G219700--Sobic003G027300 Sobic006G219700--Sobic001G400400 Sobic003G197500 Sobic003G197500 Sobic006G219700--Sobic003G197500 Sobic010G230200 Sobic010G230200 Sobic006G219700--Sobic010G230200 Sobic009G087200 Sobic009G087200 Sobic006G219700--Sobic009G087200 Sobic009G259600--Sobic006G219700 Sobic009G259600--Sobic004G318300 Sobic009G259600--Sobic008G043400 Sobic009G259600--Sobic003G027300 Sobic009G259600--Sobic002G395100 Sobic009G259600--Sobic003G197500 Sobic009G259600--Sobic001G400400 Sobic009G259600--Sobic010G230200 Sobic009G259600--Sobic009G087200 Sobic001G400400--Sobic010G034200 Sobic001G400400--Sobic009G227500 Sobic001G400400--Sobic002G395100 Sobic001G400400--Sobic006G219700 Sobic001G400400--Sobic003G197500 Sobic001G400400--Sobic009G259600 Sobic001G400400--Sobic008G043400 Sobic001G400400--Sobic006G234400 Sobic001G400400--Sobic007G061800 Sobic003G405800 Sobic003G405800 Sobic006G176200--Sobic003G405800 Sobic006G176200--Sobic009G087200 Sobic001G511100 Sobic001G511100 Sobic006G176200--Sobic001G511100 Sobic006G176200--Sobic004G318300 Sobic006G176200--Sobic003G027300 Sobic006G176200--Sobic010G230200 Sobic006G176200--Sobic008G043400 Sobic005G031700 Sobic005G031700 Sobic006G176200--Sobic005G031700 Sobic001G473700 Sobic001G473700 Sobic006G176200--Sobic001G473700 Sobic002G395100--Sobic006G219700 Sobic002G395100--Sobic001G400400 Sobic002G395100--Sobic003G197500 Sobic002G395100--Sobic008G043400 Sobic002G395100--Sobic009G259600 Sobic002G395100--Sobic010G034200 Sobic002G395100--Sobic004G318300 Sobic002G395100--Sobic003G027300 Sobic002G395100--Sobic010G230200
Octagon: transcription factors


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