Gene annotation
Transcriptome id Sobic.003G030700.1
Synonym Sb03g002880
Functional annotation ectonucleotide pyrophosphatase/phosphodiesterase family member 1, putative, expressed
UniProt C5XLV5
Pfam PF01663
Panther DB PTHR10151
NCBI CDD KOG2645; Type I phosphodiesterase/nucleotide pyrophosphatase
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT4G29680 : Alkaline-phosphatase-like family protein
RAP-DB (Rice) LOC_Os01g10020.1 : ectonucleotide pyrophosphatase/phosphodiesterase family member 1, putative, expressed
MaizeGDB (Corn) Zm00025a023004 , Zm00025a028517
Brachypodium KQK03163
Barley HORVU3Hr1G018880.14 , HORVU3Hr1G018880.15 , HORVU3Hr1G018880.12 , HORVU3Hr1G018880.13 , HORVU3Hr1G018880.10 , HORVU3Hr1G018880.11 , HORVU3Hr1G018880.8 , HORVU3Hr1G018880.9 , HORVU3Hr1G018880.4 , HORVU3Hr1G018880.5 , HORVU3Hr1G018880.6 , HORVU3Hr1G018880.7 , HORVU3Hr1G018880.3
Wheat TraesCS3A02G103900
Populus -


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cDNA sequences
Sobic.003G030700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G124800 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.001G074100 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
3 Sobic.009G134000 receptor-like protein kinase precursor, putative, expressed -
4 Sobic.002G142500 expressed protein -
5 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
6 Sobic.003G291000 protein kinase family protein, putative, expressed -
7 Sobic.001G047200 carboxyl-terminal peptidase, putative, expressed -
8 Sobic.009G154100 expressed protein -
9 Sobic.002G001100 legume lectins beta domain containing protein, putative, expressed -
10 Sobic.004G191600 expansin precursor, putative, expressed -
11 Sobic.006G241800 receptor kinase, putative, expressed -
12 Sobic.003G360700 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
13 Sobic.002G293700 ATXR, putative, expressed -
14 Sobic.004G113900 polygalacturonase, putative, expressed -
15 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
16 Sobic.002G370400 expressed protein -
17 Sobic.002G419200 inactive receptor kinase At2g26730 precursor, putative, expressed -
18 Sobic.003G223100 polygalacturonase, putative, expressed -
19 Sobic.002G035500 CIN-like (ClassII) Subclade 13 TCP(PubMedID : 21444336)@basic helix-loop-helix (bHLH) transcription factor(PubMedID : 23915383)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
20 Sobic.003G096300 homeobox and START domains containing protein, putative, expressed K09338: homeobox-leucine zipper protein


Gene co-expression network
sample Sobic003G030700 Sobic003G030700 Sobic009G124800 Sobic009G124800 Sobic003G030700--Sobic009G124800 Sobic001G074100 Sobic001G074100 Sobic003G030700--Sobic001G074100 Sobic009G134000 Sobic009G134000 Sobic003G030700--Sobic009G134000 Sobic002G142500 Sobic002G142500 Sobic003G030700--Sobic002G142500 Sobic001G113800 Sobic001G113800 Sobic003G030700--Sobic001G113800 Sobic003G291000 Sobic003G291000 Sobic003G030700--Sobic003G291000 Sobic001G047200 Sobic001G047200 Sobic003G030700--Sobic001G047200 Sobic009G154100 Sobic009G154100 Sobic003G030700--Sobic009G154100 Sobic002G001100 Sobic002G001100 Sobic003G030700--Sobic002G001100 Sobic006G272500 Sobic006G272500 Sobic009G124800--Sobic006G272500 Sobic002G293700 Sobic002G293700 Sobic009G124800--Sobic002G293700 Sobic009G124800--Sobic001G074100 Sobic001G296100 Sobic001G296100 Sobic009G124800--Sobic001G296100 Sobic001G381100 Sobic001G381100 Sobic009G124800--Sobic001G381100 Sobic006G241800 Sobic006G241800 Sobic009G124800--Sobic006G241800 Sobic010G211800 Sobic010G211800 Sobic009G124800--Sobic010G211800 Sobic002G370400 Sobic002G370400 Sobic009G124800--Sobic002G370400 Sobic004G115700 Sobic004G115700 Sobic009G124800--Sobic004G115700 Sobic001G074100--Sobic001G381100 Sobic003G031700 Sobic003G031700 Sobic001G074100--Sobic003G031700 Sobic002G362700 Sobic002G362700 Sobic001G074100--Sobic002G362700 Sobic001G074100--Sobic006G241800 Sobic001G074100--Sobic010G211800 Sobic002G045200 Sobic002G045200 Sobic001G074100--Sobic002G045200 Sobic001G074100--Sobic003G291000 Sobic001G074100--Sobic009G124800 Sobic010G211700 Sobic010G211700 Sobic001G074100--Sobic010G211700 Sobic007G012800 Sobic007G012800 Sobic009G134000--Sobic007G012800 Sobic010G143300 Sobic010G143300 Sobic009G134000--Sobic010G143300 Sobic009G134000--Sobic009G154100 Sobic003G277200 Sobic003G277200 Sobic009G134000--Sobic003G277200 Sobic006G178800 Sobic006G178800 Sobic009G134000--Sobic006G178800 Sobic010G107200 Sobic010G107200 Sobic009G134000--Sobic010G107200 Sobic001G389600 Sobic001G389600 Sobic009G134000--Sobic001G389600 Sobic001G478100 Sobic001G478100 Sobic009G134000--Sobic001G478100 Sobic005G130700 Sobic005G130700 Sobic009G134000--Sobic005G130700 Sobic006G274866 Sobic006G274866 Sobic002G142500--Sobic006G274866 Sobic006G257200 Sobic006G257200 Sobic002G142500--Sobic006G257200 Sobic002G142500--Sobic001G389600 Sobic010G165100 Sobic010G165100 Sobic002G142500--Sobic010G165100 Sobic002G311000 Sobic002G311000 Sobic002G142500--Sobic002G311000 Sobic009G235700 Sobic009G235700 Sobic002G142500--Sobic009G235700 Sobic002G142500--Sobic002G045200 Sobic002G246000 Sobic002G246000 Sobic002G142500--Sobic002G246000 Sobic002G142500--Sobic006G241800 Sobic001G487200 Sobic001G487200 Sobic001G113800--Sobic001G487200 Sobic003G360700 Sobic003G360700 Sobic001G113800--Sobic003G360700 Sobic001G231200 Sobic001G231200 Sobic001G113800--Sobic001G231200 Sobic003G230000 Sobic003G230000 Sobic001G113800--Sobic003G230000 Sobic010G135300 Sobic010G135300 Sobic001G113800--Sobic010G135300 Sobic001G113800--Sobic002G370400 Sobic002G002100 Sobic002G002100 Sobic001G113800--Sobic002G002100 Sobic001G074000 Sobic001G074000 Sobic001G113800--Sobic001G074000 Sobic001G113800--Sobic006G272500 Sobic003G291000--Sobic006G241800 Sobic003G291000--Sobic002G311000 Sobic001G461800 Sobic001G461800 Sobic003G291000--Sobic001G461800 Sobic003G291000--Sobic001G074100 Sobic003G291000--Sobic002G045200 Sobic003G078300 Sobic003G078300 Sobic003G291000--Sobic003G078300 Sobic003G291000--Sobic010G211800 Sobic002G164700 Sobic002G164700 Sobic003G291000--Sobic002G164700 Sobic003G250000 Sobic003G250000 Sobic003G291000--Sobic003G250000 Sobic001G047200--Sobic002G311000 Sobic001G047200--Sobic002G142500 Sobic001G047200--Sobic010G135300 Sobic002G377300 Sobic002G377300 Sobic001G047200--Sobic002G377300 Sobic003G096300 Sobic003G096300 Sobic001G047200--Sobic003G096300 Sobic001G482300 Sobic001G482300 Sobic001G047200--Sobic001G482300 Sobic003G420800 Sobic003G420800 Sobic001G047200--Sobic003G420800 Sobic001G157100 Sobic001G157100 Sobic001G047200--Sobic001G157100 Sobic009G148200 Sobic009G148200 Sobic001G047200--Sobic009G148200 Sobic009G154100--Sobic010G107200 Sobic005G209900 Sobic005G209900 Sobic009G154100--Sobic005G209900 Sobic002G315000 Sobic002G315000 Sobic009G154100--Sobic002G315000 Sobic009G154100--Sobic007G012800 Sobic002G179700 Sobic002G179700 Sobic009G154100--Sobic002G179700 Sobic007G189400 Sobic007G189400 Sobic009G154100--Sobic007G189400 Sobic005G227050 Sobic005G227050 Sobic009G154100--Sobic005G227050 Sobic001G221900 Sobic001G221900 Sobic009G154100--Sobic001G221900 Sobic006G032800 Sobic006G032800 Sobic009G154100--Sobic006G032800 Sobic005G015300 Sobic005G015300 Sobic002G001100--Sobic005G015300 Sobic002G001100--Sobic006G257200 Sobic002G001100--Sobic006G241800 Sobic002G001100--Sobic001G074100 Sobic002G001100--Sobic002G370400 Sobic002G001100--Sobic002G311000 Sobic002G001100--Sobic003G031700 Sobic010G024500 Sobic010G024500 Sobic002G001100--Sobic010G024500 Sobic002G001100--Sobic010G211800
Octagon: transcription factors


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