Gene annotation
Transcriptome id Sobic.004G191600.1,Sobic.004G191600.2,Sobic.004G191600.3
Synonym Sb04g023980, EXPB2, ATHEXPBETA1.4, ATEXPB2
Functional annotation expansin precursor, putative, expressed
UniProt A0A1Z5RNR4 , C5XVR2 , A0A1Z5RN75
Pfam PF03330 PF01357
Panther DB PTHR31692 PTHR31692:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65680 : expansin B2
RAP-DB (Rice) LOC_Os10g40720.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a010228 , Zm00025a051985 , Zm00025a051983 , Zm00025a051980 , Zm00025a051978 , Zm00025a012128 , Zm00025a003332 , Zm00025a003330 , Zm00025a003331
Brachypodium KQJ97766 , KQJ97762 , KQK24135
Barley HORVU4Hr1G088080.6 , HORVU4Hr1G088080.5 , HORVU4Hr1G088080.8 , HORVU4Hr1G088080.9 , HORVU4Hr1G088080.2 , HORVU4Hr1G088080.3 , HORVU4Hr1G088080.1 , HORVU4Hr1G088080.7 , HORVU4Hr1G088080.4 , HORVU6Hr1G005760.1 , HORVU6Hr1G055090.1 , HORVU6Hr1G055090.2 , HORVU4Hr1G088140.3 , HORVU4Hr1G088140.2 , HORVU4Hr1G088140.1 , HORVU6Hr1G005810.2 , HORVU6Hr1G005810.3 , HORVU6Hr1G005810.4 , HORVU3Hr1G073140.1 , HORVU3Hr1G105170.1 , HORVU3Hr1G073120.1 , HORVU3Hr1G105180.1 , HORVU3Hr1G076110.1
Wheat TraesCS5D02G086000 , TraesCS5B02G079400 , TraesCS3B02G524500 , TraesCS3D02G474800 , TraesCS6D02G037700 , TraesCS3A02G480000 , TraesCS3D02G000500 , TraesCSU02G085500 , TraesCS4D02G361700 , TraesCS6D02G037500 , TraesCS1B02G225700 , TraesCS1B02G225700 , TraesCS5A02G537300 , TraesCS3D02G476800 , TraesCS1B02G225900 , TraesCS6A02G032700 , TraesCS6B02G046100 , TraesCS6B02G046200 , TraesCS5A02G073100 , TraesCS6A02G217100 , TraesCS6D02G198400 , TraesCS3D02G476700 , TraesCS6B02G245700 , TraesCS3A02G479900 , TraesCS4B02G375200 , TraesCS4B02G375600 , TraesCS6B02G046300 , TraesCS5A02G538000 , TraesCS6B02G046000 , TraesCS4D02G361900
Populus -


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cDNA sequences
Sobic.004G191600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G035500 CIN-like (ClassII) Subclade 13 TCP(PubMedID : 21444336)@basic helix-loop-helix (bHLH) transcription factor(PubMedID : 23915383)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
2 Sobic.006G112800 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
3 Sobic.010G215300 cyclin-dependent kinase B2-1, putative, expressed K07760: cyclin-dependent kinase
4 Sobic.003G414400 expressed protein -
5 Sobic.005G129600 OsSCP63 - Putative Serine Carboxypeptidase homologue, expressed K16297: serine carboxypeptidase-like clade II
6 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
7 Sobic.001G140600 expressed protein -
8 Sobic.008G096200 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
9 Sobic.001G540900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
10 Sobic.010G111200 "GASR7(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659934)@GASR7 - Gibberellin-regulated GASA/GAST/Snakin family protein precursor, expressed -
11 Sobic.009G124800 zinc finger, C3HC4 type domain containing protein, expressed -
12 Sobic.004G357000 inactive receptor kinase At2g26730 precursor, putative, expressed -
13 Sobic.006G241800 receptor kinase, putative, expressed -
14 Sobic.001G074100 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
15 Sobic.002G394500 proline-rich family protein, putative, expressed -
16 Sobic.003G432000 expressed protein -
17 Sobic.008G093600 expressed protein -
18 Sobic.001G231200 expressed protein -
19 Sobic.010G202100 expressed protein -
20 Sobic.002G362700 zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic004G191600 Sobic004G191600 Sobic002G035500 Sobic002G035500 Sobic004G191600--Sobic002G035500 Sobic006G112800 Sobic006G112800 Sobic004G191600--Sobic006G112800 Sobic010G215300 Sobic010G215300 Sobic004G191600--Sobic010G215300 Sobic003G414400 Sobic003G414400 Sobic004G191600--Sobic003G414400 Sobic005G129600 Sobic005G129600 Sobic004G191600--Sobic005G129600 Sobic010G211800 Sobic010G211800 Sobic004G191600--Sobic010G211800 Sobic001G140600 Sobic001G140600 Sobic004G191600--Sobic001G140600 Sobic008G096200 Sobic008G096200 Sobic004G191600--Sobic008G096200 Sobic001G540900 Sobic001G540900 Sobic004G191600--Sobic001G540900 Sobic007G019600 Sobic007G019600 Sobic002G035500--Sobic007G019600 Sobic002G035500--Sobic005G129600 Sobic004G113900 Sobic004G113900 Sobic002G035500--Sobic004G113900 Sobic010G209800 Sobic010G209800 Sobic002G035500--Sobic010G209800 Sobic002G035500--Sobic004G191600 Sobic003G282600 Sobic003G282600 Sobic002G035500--Sobic003G282600 Sobic009G257900 Sobic009G257900 Sobic002G035500--Sobic009G257900 Sobic004G237300 Sobic004G237300 Sobic002G035500--Sobic004G237300 Sobic007G162000 Sobic007G162000 Sobic002G035500--Sobic007G162000 Sobic004G271300 Sobic004G271300 Sobic006G112800--Sobic004G271300 Sobic003G032200 Sobic003G032200 Sobic006G112800--Sobic003G032200 Sobic004G108400 Sobic004G108400 Sobic006G112800--Sobic004G108400 Sobic002G204400 Sobic002G204400 Sobic006G112800--Sobic002G204400 Sobic002G296000 Sobic002G296000 Sobic006G112800--Sobic002G296000 Sobic007G027900 Sobic007G027900 Sobic006G112800--Sobic007G027900 Sobic006G112800--Sobic001G540900 Sobic007G168900 Sobic007G168900 Sobic006G112800--Sobic007G168900 Sobic007G008300 Sobic007G008300 Sobic006G112800--Sobic007G008300 Sobic001G098900 Sobic001G098900 Sobic010G215300--Sobic001G098900 Sobic010G234800 Sobic010G234800 Sobic010G215300--Sobic010G234800 Sobic010G215300--Sobic003G414400 Sobic010G202100 Sobic010G202100 Sobic010G215300--Sobic010G202100 Sobic010G215300--Sobic001G140600 Sobic003G047200 Sobic003G047200 Sobic010G215300--Sobic003G047200 Sobic008G114500 Sobic008G114500 Sobic010G215300--Sobic008G114500 Sobic010G215300--Sobic001G540900 Sobic001G284900 Sobic001G284900 Sobic010G215300--Sobic001G284900 Sobic003G414400--Sobic001G284900 Sobic003G414400--Sobic010G215300 Sobic003G414400--Sobic001G098900 Sobic003G414400--Sobic010G202100 Sobic003G414400--Sobic003G047200 Sobic003G414400--Sobic010G234800 Sobic006G155900 Sobic006G155900 Sobic003G414400--Sobic006G155900 Sobic001G070200 Sobic001G070200 Sobic003G414400--Sobic001G070200 Sobic003G414400--Sobic004G271300 Sobic004G357000 Sobic004G357000 Sobic005G129600--Sobic004G357000 Sobic005G129600--Sobic004G113900 Sobic003G432000 Sobic003G432000 Sobic005G129600--Sobic003G432000 Sobic007G211200 Sobic007G211200 Sobic005G129600--Sobic007G211200 Sobic001G267800 Sobic001G267800 Sobic005G129600--Sobic001G267800 Sobic005G129600--Sobic002G035500 Sobic003G089300 Sobic003G089300 Sobic005G129600--Sobic003G089300 Sobic005G129600--Sobic009G257900 Sobic004G317200 Sobic004G317200 Sobic005G129600--Sobic004G317200 Sobic010G211700 Sobic010G211700 Sobic010G211800--Sobic010G211700 Sobic002G360500 Sobic002G360500 Sobic010G211800--Sobic002G360500 Sobic002G417000 Sobic002G417000 Sobic010G211800--Sobic002G417000 Sobic003G031700 Sobic003G031700 Sobic010G211800--Sobic003G031700 Sobic002G045200 Sobic002G045200 Sobic010G211800--Sobic002G045200 Sobic001G074100 Sobic001G074100 Sobic010G211800--Sobic001G074100 Sobic002G362700 Sobic002G362700 Sobic010G211800--Sobic002G362700 Sobic006G241800 Sobic006G241800 Sobic010G211800--Sobic006G241800 Sobic010G211800--Sobic008G096200 Sobic002G313000 Sobic002G313000 Sobic001G140600--Sobic002G313000 Sobic008G006800 Sobic008G006800 Sobic001G140600--Sobic008G006800 Sobic001G177900 Sobic001G177900 Sobic001G140600--Sobic001G177900 Sobic001G140600--Sobic001G540900 Sobic003G260700 Sobic003G260700 Sobic001G140600--Sobic003G260700 Sobic001G140600--Sobic004G271300 Sobic001G140600--Sobic010G215300 Sobic003G102000 Sobic003G102000 Sobic001G140600--Sobic003G102000 Sobic004G339500 Sobic004G339500 Sobic001G140600--Sobic004G339500 Sobic001G231200 Sobic001G231200 Sobic008G096200--Sobic001G231200 Sobic010G105400 Sobic010G105400 Sobic008G096200--Sobic010G105400 Sobic008G096200--Sobic010G211800 Sobic002G394500 Sobic002G394500 Sobic008G096200--Sobic002G394500 Sobic001G487200 Sobic001G487200 Sobic008G096200--Sobic001G487200 Sobic005G144600 Sobic005G144600 Sobic008G096200--Sobic005G144600 Sobic003G420300 Sobic003G420300 Sobic008G096200--Sobic003G420300 Sobic002G426800 Sobic002G426800 Sobic008G096200--Sobic002G426800 Sobic001G261549 Sobic001G261549 Sobic008G096200--Sobic001G261549 Sobic004G257600 Sobic004G257600 Sobic001G540900--Sobic004G257600 Sobic007G000500 Sobic007G000500 Sobic001G540900--Sobic007G000500 Sobic001G540900--Sobic001G140600 Sobic001G540900--Sobic003G260700 Sobic001G540900--Sobic004G271300 Sobic001G540900--Sobic001G177900 Sobic001G540900--Sobic002G313000 Sobic003G444100 Sobic003G444100 Sobic001G540900--Sobic003G444100 Sobic001G540900--Sobic007G168900
Octagon: transcription factors


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