Gene annotation
Transcriptome id Sobic.003G064500.1
Synonym Sb03g005510, HERK1
Functional annotation TKL_IRAK_CrRLK1L-1.4 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
UniProt A0A1B6Q1P6
Pfam PF07714 PF12819
Panther DB PTHR27003:SF67 PTHR27003
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0004672; protein kinase activity GO:0006468protein phosphorylation


Orthologs (automatic annotation)
TAIR AT3G46290 : hercules receptor kinase 1
RAP-DB (Rice) LOC_Os01g06280.2 : TKL_IRAK_CrRLK1L-1.4 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed
MaizeGDB (Corn) Zm00025a034564
Brachypodium -
Barley HORVU3Hr1G024950.11 , HORVU3Hr1G024950.10 , HORVU0Hr1G013830.2 , HORVU4Hr1G084510.1 , HORVU4Hr1G084510.2 , HORVU4Hr1G084510.3 , HORVU4Hr1G084510.4 , HORVU3Hr1G086590.1 , HORVU3Hr1G086590.3 , HORVU3Hr1G086590.2 , HORVU3Hr1G024950.5 , HORVU3Hr1G024950.4 , HORVU3Hr1G024950.7 , HORVU3Hr1G024950.6 , HORVU3Hr1G024950.1 , HORVU3Hr1G024950.3 , HORVU3Hr1G024950.2 , HORVU3Hr1G024950.9 , HORVU3Hr1G024950.8
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G064600 - -
2 Sobic.003G310800 expressed protein -
3 Sobic.005G094001 - -
4 Sobic.005G191500 ATBPM2, putative, expressed -
5 Sobic.003G015500 - -
6 Sobic.001G048000 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.002G281000 aquaporin protein, putative, expressed K09872: aquaporin PIP
8 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
9 Sobic.001G044200 uncharacterized 50.6 kDa protein in the 5region of gyrA and gyrB, putative, expressed -
10 Sobic.005G021600 expressed protein -
11 Sobic.008G063100 thioredoxin, putative, expressed K03671: thioredoxin 1
12 Sobic.001G030500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
13 Sobic.005G175600 TKL_IRAK_DUF26-lc.24 - DUF26 kinases have homology to DUF26 containing loci, expressed -
14 Sobic.003G118266 - -
15 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
16 Sobic.002G046900 HNH endonuclease domain-containing protein, putative, expressed -
17 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -
18 Sobic.002G370700 expressed protein -
19 Sobic.002G303300 anthranilate phosphoribosyltransferase, putative, expressed -
20 Sobic.003G413800 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic003G064500 Sobic003G064500 Sobic003G064600 Sobic003G064600 Sobic003G064500--Sobic003G064600 Sobic003G310800 Sobic003G310800 Sobic003G064500--Sobic003G310800 Sobic005G094001 Sobic005G094001 Sobic003G064500--Sobic005G094001 Sobic005G191500 Sobic005G191500 Sobic003G064500--Sobic005G191500 Sobic003G015500 Sobic003G015500 Sobic003G064500--Sobic003G015500 Sobic001G048000 Sobic001G048000 Sobic003G064500--Sobic001G048000 Sobic002G281000 Sobic002G281000 Sobic003G064500--Sobic002G281000 Sobic002G366100 Sobic002G366100 Sobic003G064500--Sobic002G366100 Sobic001G044200 Sobic001G044200 Sobic003G064500--Sobic001G044200 Sobic003G064600--Sobic003G064500 Sobic003G064600--Sobic001G044200 Sobic008G065866 Sobic008G065866 Sobic003G064600--Sobic008G065866 Sobic001G267400 Sobic001G267400 Sobic003G064600--Sobic001G267400 Sobic004G082200 Sobic004G082200 Sobic003G064600--Sobic004G082200 Sobic006G236100 Sobic006G236100 Sobic003G064600--Sobic006G236100 Sobic006G159700 Sobic006G159700 Sobic003G064600--Sobic006G159700 Sobic002G035766 Sobic002G035766 Sobic003G064600--Sobic002G035766 Sobic007G154901 Sobic007G154901 Sobic003G064600--Sobic007G154901 Sobic010G279100 Sobic010G279100 Sobic003G310800--Sobic010G279100 Sobic003G214800 Sobic003G214800 Sobic003G310800--Sobic003G214800 Sobic001G186200 Sobic001G186200 Sobic003G310800--Sobic001G186200 Sobic001G006000 Sobic001G006000 Sobic003G310800--Sobic001G006000 Sobic001G455500 Sobic001G455500 Sobic003G310800--Sobic001G455500 Sobic002G038300 Sobic002G038300 Sobic003G310800--Sobic002G038300 Sobic010G028000 Sobic010G028000 Sobic003G310800--Sobic010G028000 Sobic003G245800 Sobic003G245800 Sobic003G310800--Sobic003G245800 Sobic001G388400 Sobic001G388400 Sobic003G310800--Sobic001G388400 Sobic010G204000 Sobic010G204000 Sobic005G094001--Sobic010G204000 Sobic008G178300 Sobic008G178300 Sobic005G094001--Sobic008G178300 Sobic005G094001--Sobic001G044200 Sobic010G094750 Sobic010G094750 Sobic005G094001--Sobic010G094750 Sobic010G123000 Sobic010G123000 Sobic005G094001--Sobic010G123000 Sobic002G313850 Sobic002G313850 Sobic005G094001--Sobic002G313850 Sobic003G318350 Sobic003G318350 Sobic005G094001--Sobic003G318350 Sobic001G205600 Sobic001G205600 Sobic005G094001--Sobic001G205600 Sobic003G125200 Sobic003G125200 Sobic005G094001--Sobic003G125200 Sobic003G106500 Sobic003G106500 Sobic005G191500--Sobic003G106500 Sobic008G073400 Sobic008G073400 Sobic005G191500--Sobic008G073400 Sobic001G520100 Sobic001G520100 Sobic005G191500--Sobic001G520100 Sobic001G019300 Sobic001G019300 Sobic005G191500--Sobic001G019300 Sobic001G161100 Sobic001G161100 Sobic005G191500--Sobic001G161100 Sobic007G178500 Sobic007G178500 Sobic005G191500--Sobic007G178500 Sobic005G191500--Sobic003G015500 Sobic010G179500 Sobic010G179500 Sobic005G191500--Sobic010G179500 Sobic001G260850 Sobic001G260850 Sobic005G191500--Sobic001G260850 Sobic003G015500--Sobic005G191500 Sobic004G352400 Sobic004G352400 Sobic003G015500--Sobic004G352400 Sobic003G015500--Sobic003G064500 Sobic001G299400 Sobic001G299400 Sobic003G015500--Sobic001G299400 Sobic004G289300 Sobic004G289300 Sobic003G015500--Sobic004G289300 Sobic002G391000 Sobic002G391000 Sobic003G015500--Sobic002G391000 Sobic002G048501 Sobic002G048501 Sobic003G015500--Sobic002G048501 Sobic002G395200 Sobic002G395200 Sobic003G015500--Sobic002G395200 Sobic003G279400 Sobic003G279400 Sobic003G015500--Sobic003G279400 Sobic001G525900 Sobic001G525900 Sobic001G048000--Sobic001G525900 Sobic001G048000--Sobic002G281000 Sobic001G404500 Sobic001G404500 Sobic001G048000--Sobic001G404500 Sobic005G175600 Sobic005G175600 Sobic001G048000--Sobic005G175600 Sobic001G048000--Sobic002G366100 Sobic003G292600 Sobic003G292600 Sobic001G048000--Sobic003G292600 Sobic001G005500 Sobic001G005500 Sobic001G048000--Sobic001G005500 Sobic005G127000 Sobic005G127000 Sobic001G048000--Sobic005G127000 Sobic002G195700 Sobic002G195700 Sobic001G048000--Sobic002G195700 Sobic002G281000--Sobic001G525900 Sobic002G281000--Sobic001G019300 Sobic008G063100 Sobic008G063100 Sobic002G281000--Sobic008G063100 Sobic009G202400 Sobic009G202400 Sobic002G281000--Sobic009G202400 Sobic002G281000--Sobic002G195700 Sobic005G097800 Sobic005G097800 Sobic002G281000--Sobic005G097800 Sobic004G063200 Sobic004G063200 Sobic002G281000--Sobic004G063200 Sobic002G281000--Sobic001G404500 Sobic005G021600 Sobic005G021600 Sobic002G281000--Sobic005G021600 Sobic002G366100--Sobic002G195700 Sobic001G145050 Sobic001G145050 Sobic002G366100--Sobic001G145050 Sobic002G366100--Sobic001G005500 Sobic009G255100 Sobic009G255100 Sobic002G366100--Sobic009G255100 Sobic006G060800 Sobic006G060800 Sobic002G366100--Sobic006G060800 Sobic001G321600 Sobic001G321600 Sobic002G366100--Sobic001G321600 Sobic002G366100--Sobic005G021600 Sobic004G068700 Sobic004G068700 Sobic002G366100--Sobic004G068700 Sobic002G366100--Sobic001G404500 Sobic006G125301 Sobic006G125301 Sobic001G044200--Sobic006G125301 Sobic004G201200 Sobic004G201200 Sobic001G044200--Sobic004G201200 Sobic001G044200--Sobic010G094750 Sobic007G059800 Sobic007G059800 Sobic001G044200--Sobic007G059800 Sobic001G071900 Sobic001G071900 Sobic001G044200--Sobic001G071900 Sobic002G069601 Sobic002G069601 Sobic001G044200--Sobic002G069601 Sobic001G044200--Sobic002G391000 Sobic001G044200--Sobic003G125200 Sobic003G318400 Sobic003G318400 Sobic001G044200--Sobic003G318400
Octagon: transcription factors


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