Gene annotation
Transcriptome id Sobic.003G271300.1
Synonym Sb03g032350
Functional annotation ABC-2 type transporter domain containing protein, expressed
UniProt C5XHL7
Pfam PF00005 PF01061
Panther DB PTHR19241 PTHR19241:SF296
NCBI CDD KOG0061; Transporter, ABC superfamily (Breast cancer resistance protein)
KEGG Orthology -
Gene Ontology GO:0016887; ATPase activity GO:0005524ATP binding GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT2G37360 : ABC-2 type transporter family protein
RAP-DB (Rice) LOC_Os09g23640.1 : ABC-2 type transporter domain containing protein, expressed
MaizeGDB (Corn) Zm00025a049532 , Zm00025a027866
Brachypodium KQK06480
Barley HORVU5Hr1G070400.5 , HORVU5Hr1G070400.6 , HORVU5Hr1G070400.7 , HORVU5Hr1G070400.2 , HORVU5Hr1G070400.3 , HORVU3Hr1G066220.1 , HORVU3Hr1G066220.3 , HORVU3Hr1G066220.2 , HORVU3Hr1G066220.5 , HORVU3Hr1G066220.4 , HORVU5Hr1G070400.22 , HORVU5Hr1G070400.21 , HORVU5Hr1G070400.20 , HORVU5Hr1G070400.14 , HORVU5Hr1G070400.12 , HORVU5Hr1G070400.13 , HORVU5Hr1G070400.18 , HORVU5Hr1G070400.10
Wheat TraesCS3D02G254600 , TraesCS3A02G253700 , TraesCS3A02G253700 , TraesCS5A02G249900 , TraesCS5B02G248000 , TraesCS3B02G285600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G189300 cytochrome P450, putative, expressed -
2 Sobic.001G004901 - -
3 Sobic.001G403800 expressed protein -
4 Sobic.010G083200 gibberellin receptor GID1L2, putative, expressed -
5 Sobic.002G189350 - -
6 Sobic.002G231100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@ZF-HD protein dimerisation region containing protein, expressed -
7 Sobic.001G380100 DUF623 domain containing protein, expressed -
8 Sobic.010G110050 - -
9 Sobic.002G375600 expressed protein -
10 Sobic.002G429200 expressed protein -
11 Sobic.006G098400 alpha/beta hydrolase fold, putative, expressed -
12 Sobic.002G427201 - -
13 Sobic.004G341500 O-methyltransferase, putative, expressed -
14 Sobic.003G292800 expressed protein -
15 Sobic.010G074960 - -
16 Sobic.003G396400 harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.006G208050 - -
18 Sobic.001G065400 - -
19 Sobic.004G269900 "GS2/GL2(Ortholog in rice:Che et al., 2015(PubMedID : 31659888)@growth-regulating factor, putative, expressed -
20 Sobic.007G031000 X8 domain containing protein, expressed -


Gene co-expression network
sample Sobic003G271300 Sobic003G271300 Sobic002G189300 Sobic002G189300 Sobic003G271300--Sobic002G189300 Sobic001G004901 Sobic001G004901 Sobic003G271300--Sobic001G004901 Sobic001G403800 Sobic001G403800 Sobic003G271300--Sobic001G403800 Sobic010G083200 Sobic010G083200 Sobic003G271300--Sobic010G083200 Sobic002G189350 Sobic002G189350 Sobic003G271300--Sobic002G189350 Sobic002G231100 Sobic002G231100 Sobic003G271300--Sobic002G231100 Sobic001G380100 Sobic001G380100 Sobic003G271300--Sobic001G380100 Sobic010G110050 Sobic010G110050 Sobic003G271300--Sobic010G110050 Sobic002G375600 Sobic002G375600 Sobic003G271300--Sobic002G375600 Sobic002G189300--Sobic001G403800 Sobic004G269900 Sobic004G269900 Sobic002G189300--Sobic004G269900 Sobic002G022600 Sobic002G022600 Sobic002G189300--Sobic002G022600 Sobic006G098400 Sobic006G098400 Sobic002G189300--Sobic006G098400 Sobic002G189300--Sobic003G271300 Sobic010G074960 Sobic010G074960 Sobic002G189300--Sobic010G074960 Sobic008G042100 Sobic008G042100 Sobic002G189300--Sobic008G042100 Sobic008G127200 Sobic008G127200 Sobic002G189300--Sobic008G127200 Sobic009G194600 Sobic009G194600 Sobic002G189300--Sobic009G194600 Sobic002G427201 Sobic002G427201 Sobic001G004901--Sobic002G427201 Sobic002G262500 Sobic002G262500 Sobic001G004901--Sobic002G262500 Sobic003G396400 Sobic003G396400 Sobic001G004901--Sobic003G396400 Sobic003G292800 Sobic003G292800 Sobic001G004901--Sobic003G292800 Sobic001G004901--Sobic002G375600 Sobic010G183900 Sobic010G183900 Sobic001G004901--Sobic010G183900 Sobic001G004901--Sobic002G189350 Sobic001G065400 Sobic001G065400 Sobic001G004901--Sobic001G065400 Sobic004G341500 Sobic004G341500 Sobic001G004901--Sobic004G341500 Sobic001G403800--Sobic002G189300 Sobic001G403800--Sobic006G098400 Sobic001G527200 Sobic001G527200 Sobic001G403800--Sobic001G527200 Sobic001G403800--Sobic004G269900 Sobic001G403800--Sobic010G110050 Sobic001G403800--Sobic003G271300 Sobic001G403800--Sobic002G022600 Sobic005G073500 Sobic005G073500 Sobic001G403800--Sobic005G073500 Sobic004G158000 Sobic004G158000 Sobic001G403800--Sobic004G158000 Sobic004G084800 Sobic004G084800 Sobic010G083200--Sobic004G084800 Sobic010G083200--Sobic001G380100 Sobic004G190300 Sobic004G190300 Sobic010G083200--Sobic004G190300 Sobic007G218550 Sobic007G218550 Sobic010G083200--Sobic007G218550 Sobic001G221750 Sobic001G221750 Sobic010G083200--Sobic001G221750 Sobic010G200300 Sobic010G200300 Sobic010G083200--Sobic010G200300 Sobic004G089801 Sobic004G089801 Sobic010G083200--Sobic004G089801 Sobic003G048900 Sobic003G048900 Sobic010G083200--Sobic003G048900 Sobic002G269700 Sobic002G269700 Sobic010G083200--Sobic002G269700 Sobic005G230600 Sobic005G230600 Sobic002G189350--Sobic005G230600 Sobic002G429200 Sobic002G429200 Sobic002G189350--Sobic002G429200 Sobic002G189350--Sobic002G375600 Sobic002G189350--Sobic003G292800 Sobic004G071401 Sobic004G071401 Sobic002G189350--Sobic004G071401 Sobic005G106800 Sobic005G106800 Sobic002G189350--Sobic005G106800 Sobic009G221701 Sobic009G221701 Sobic002G189350--Sobic009G221701 Sobic003G299400 Sobic003G299400 Sobic002G189350--Sobic003G299400 Sobic006G242600 Sobic006G242600 Sobic002G189350--Sobic006G242600 Sobic008G102050 Sobic008G102050 Sobic002G231100--Sobic008G102050 Sobic002G138000 Sobic002G138000 Sobic002G231100--Sobic002G138000 Sobic001G144900 Sobic001G144900 Sobic002G231100--Sobic001G144900 Sobic006G084100 Sobic006G084100 Sobic002G231100--Sobic006G084100 Sobic002G383500 Sobic002G383500 Sobic002G231100--Sobic002G383500 Sobic007G004900 Sobic007G004900 Sobic002G231100--Sobic007G004900 Sobic001G311200 Sobic001G311200 Sobic002G231100--Sobic001G311200 Sobic001G091000 Sobic001G091000 Sobic002G231100--Sobic001G091000 Sobic001G388100 Sobic001G388100 Sobic002G231100--Sobic001G388100 Sobic001G380100--Sobic010G083200 Sobic001G380100--Sobic004G190300 Sobic001G204400 Sobic001G204400 Sobic001G380100--Sobic001G204400 Sobic001G380100--Sobic010G110050 Sobic001G380100--Sobic004G084800 Sobic002G280001 Sobic002G280001 Sobic001G380100--Sobic002G280001 Sobic002G266250 Sobic002G266250 Sobic001G380100--Sobic002G266250 Sobic001G380100--Sobic001G004901 Sobic007G031000 Sobic007G031000 Sobic001G380100--Sobic007G031000 Sobic010G110050--Sobic002G266250 Sobic010G110050--Sobic001G380100 Sobic010G110050--Sobic001G204400 Sobic003G235601 Sobic003G235601 Sobic010G110050--Sobic003G235601 Sobic004G203600 Sobic004G203600 Sobic010G110050--Sobic004G203600 Sobic003G337900 Sobic003G337900 Sobic010G110050--Sobic003G337900 Sobic010G110050--Sobic001G403800 Sobic010G110050--Sobic002G280001 Sobic010G110050--Sobic007G031000 Sobic002G375600--Sobic002G429200 Sobic002G375600--Sobic007G031000 Sobic002G375600--Sobic005G230600 Sobic002G375600--Sobic003G292800 Sobic009G005750 Sobic009G005750 Sobic002G375600--Sobic009G005750 Sobic002G375600--Sobic002G189350 Sobic002G295550 Sobic002G295550 Sobic002G375600--Sobic002G295550 Sobic002G375600--Sobic004G071401 Sobic002G003900 Sobic002G003900 Sobic002G375600--Sobic002G003900
Octagon: transcription factors


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