Gene annotation
Transcriptome id Sobic.006G098400.1
Synonym CXE13, ATCXE13
Functional annotation alpha/beta hydrolase fold, putative, expressed
UniProt A0A1Z5RD24
Pfam PF00135
Panther DB PTHR23024 PTHR23024:SF220
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G48700 : carboxyesterase 13
RAP-DB (Rice) LOC_Os04g37680.1 : alpha/beta hydrolase fold, putative, expressed
MaizeGDB (Corn) Zm00025a042521 , Zm00025a005705 , Zm00025a056167 , Zm00025a047292
Brachypodium KQK14956 , KQK14954 , KQK14950 , KQK15317 , KQK19009 , PNT61194
Barley HORVU2Hr1G025230.4 , HORVU2Hr1G025230.2 , HORVU2Hr1G025230.3 , HORVU2Hr1G025230.1 , HORVU1Hr1G037610.1
Wheat TraesCS7A02G172700 , TraesCS7B02G077600
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G022600 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
2 Sobic.004G269900 "GS2/GL2(Ortholog in rice:Che et al., 2015(PubMedID : 31659888)@growth-regulating factor, putative, expressed -
3 Sobic.002G189300 cytochrome P450, putative, expressed -
4 Sobic.001G403800 expressed protein -
5 Sobic.003G037200 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.006G208050 - -
7 Sobic.001G404000 glucan endo-1,3-beta-glucosidase 9 precursor, putative, expressed -
8 Sobic.001G079600 HLS, putative, expressed -
9 Sobic.003G047300 phototropic-responsive NPH3 family protein, putative, expressed -
10 Sobic.004G158000 major ampullate spidroin 2-2, putative, expressed -
11 Sobic.001G049000 OsFBD9 - F-box and FBD domain containing protein, expressed -
12 Sobic.001G193900 - -
13 Sobic.009G233600 OsFBLD9 - F-box, LRR and FBD domain containing protein, expressed -
14 Sobic.008G127200 expressed protein -
15 Sobic.003G271300 ABC-2 type transporter domain containing protein, expressed -
16 Sobic.005G188400 remorin C-terminal domain containing protein, putative, expressed -
17 Sobic.002G356700 OsFBD6 - F-box and FBD domain containing protein, expressed -
18 Sobic.004G222300 DEF7 - Defensin and Defensin-like DEFL family, expressed -
19 Sobic.010G145200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@CPuORF31 - conserved peptide uORF-containing transcript, expressed -
20 Sobic.002G052500 - -


Gene co-expression network
sample Sobic006G098400 Sobic006G098400 Sobic002G022600 Sobic002G022600 Sobic006G098400--Sobic002G022600 Sobic004G269900 Sobic004G269900 Sobic006G098400--Sobic004G269900 Sobic002G189300 Sobic002G189300 Sobic006G098400--Sobic002G189300 Sobic001G403800 Sobic001G403800 Sobic006G098400--Sobic001G403800 Sobic003G037200 Sobic003G037200 Sobic006G098400--Sobic003G037200 Sobic006G208050 Sobic006G208050 Sobic006G098400--Sobic006G208050 Sobic001G404000 Sobic001G404000 Sobic006G098400--Sobic001G404000 Sobic001G079600 Sobic001G079600 Sobic006G098400--Sobic001G079600 Sobic003G047300 Sobic003G047300 Sobic006G098400--Sobic003G047300 Sobic002G022600--Sobic004G269900 Sobic002G022600--Sobic006G098400 Sobic002G022600--Sobic002G189300 Sobic002G022600--Sobic003G047300 Sobic002G022600--Sobic001G079600 Sobic009G233600 Sobic009G233600 Sobic002G022600--Sobic009G233600 Sobic010G145200 Sobic010G145200 Sobic002G022600--Sobic010G145200 Sobic008G127200 Sobic008G127200 Sobic002G022600--Sobic008G127200 Sobic005G188400 Sobic005G188400 Sobic002G022600--Sobic005G188400 Sobic004G269900--Sobic002G022600 Sobic004G269900--Sobic006G098400 Sobic004G269900--Sobic002G189300 Sobic004G269900--Sobic003G037200 Sobic004G269900--Sobic009G233600 Sobic004G269900--Sobic001G079600 Sobic006G260600 Sobic006G260600 Sobic004G269900--Sobic006G260600 Sobic002G356700 Sobic002G356700 Sobic004G269900--Sobic002G356700 Sobic004G269900--Sobic010G145200 Sobic002G189300--Sobic001G403800 Sobic002G189300--Sobic004G269900 Sobic002G189300--Sobic002G022600 Sobic002G189300--Sobic006G098400 Sobic003G271300 Sobic003G271300 Sobic002G189300--Sobic003G271300 Sobic010G074960 Sobic010G074960 Sobic002G189300--Sobic010G074960 Sobic008G042100 Sobic008G042100 Sobic002G189300--Sobic008G042100 Sobic002G189300--Sobic008G127200 Sobic009G194600 Sobic009G194600 Sobic002G189300--Sobic009G194600 Sobic001G403800--Sobic002G189300 Sobic001G403800--Sobic006G098400 Sobic001G527200 Sobic001G527200 Sobic001G403800--Sobic001G527200 Sobic001G403800--Sobic004G269900 Sobic010G110050 Sobic010G110050 Sobic001G403800--Sobic010G110050 Sobic001G403800--Sobic003G271300 Sobic001G403800--Sobic002G022600 Sobic005G073500 Sobic005G073500 Sobic001G403800--Sobic005G073500 Sobic004G158000 Sobic004G158000 Sobic001G403800--Sobic004G158000 Sobic003G037200--Sobic004G269900 Sobic003G037200--Sobic006G098400 Sobic003G037200--Sobic002G022600 Sobic001G023900 Sobic001G023900 Sobic003G037200--Sobic001G023900 Sobic003G037200--Sobic001G404000 Sobic003G037200--Sobic001G079600 Sobic006G135800 Sobic006G135800 Sobic003G037200--Sobic006G135800 Sobic002G375900 Sobic002G375900 Sobic003G037200--Sobic002G375900 Sobic001G193900 Sobic001G193900 Sobic003G037200--Sobic001G193900 Sobic002G052500 Sobic002G052500 Sobic006G208050--Sobic002G052500 Sobic003G026100 Sobic003G026100 Sobic006G208050--Sobic003G026100 Sobic010G058650 Sobic010G058650 Sobic006G208050--Sobic010G058650 Sobic001G378550 Sobic001G378550 Sobic006G208050--Sobic001G378550 Sobic006G201200 Sobic006G201200 Sobic006G208050--Sobic006G201200 Sobic006G208050--Sobic006G098400 Sobic009G249301 Sobic009G249301 Sobic006G208050--Sobic009G249301 Sobic006G272450 Sobic006G272450 Sobic006G208050--Sobic006G272450 Sobic001G361500 Sobic001G361500 Sobic006G208050--Sobic001G361500 Sobic001G404000--Sobic002G022600 Sobic001G059900 Sobic001G059900 Sobic001G404000--Sobic001G059900 Sobic001G404000--Sobic004G269900 Sobic001G404000--Sobic006G098400 Sobic002G237700 Sobic002G237700 Sobic001G404000--Sobic002G237700 Sobic003G231900 Sobic003G231900 Sobic001G404000--Sobic003G231900 Sobic001G404000--Sobic009G233600 Sobic005G111600 Sobic005G111600 Sobic001G404000--Sobic005G111600 Sobic006G146900 Sobic006G146900 Sobic001G404000--Sobic006G146900 Sobic001G079600--Sobic004G269900 Sobic001G079600--Sobic002G022600 Sobic001G079600--Sobic009G233600 Sobic001G079600--Sobic005G188400 Sobic003G336400 Sobic003G336400 Sobic001G079600--Sobic003G336400 Sobic001G177200 Sobic001G177200 Sobic001G079600--Sobic001G177200 Sobic001G079600--Sobic002G189300 Sobic001G079600--Sobic006G098400 Sobic009G229100 Sobic009G229100 Sobic001G079600--Sobic009G229100 Sobic009G070000 Sobic009G070000 Sobic003G047300--Sobic009G070000 Sobic006G271100 Sobic006G271100 Sobic003G047300--Sobic006G271100 Sobic001G049000 Sobic001G049000 Sobic003G047300--Sobic001G049000 Sobic004G296100 Sobic004G296100 Sobic003G047300--Sobic004G296100 Sobic003G047300--Sobic005G111600 Sobic003G364700 Sobic003G364700 Sobic003G047300--Sobic003G364700 Sobic003G047300--Sobic010G145200 Sobic003G047300--Sobic009G229100 Sobic004G049800 Sobic004G049800 Sobic003G047300--Sobic004G049800
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.