Gene annotation
Transcriptome id Sobic.004G158000.1
Synonym Sb04g021070
Functional annotation major ampullate spidroin 2-2, putative, expressed
UniProt C5XT79
Pfam -
Panther DB PTHR14791 PTHR14791:SF27
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G33510 : -
RAP-DB (Rice) LOC_Os02g31140.1 : major ampullate spidroin 2-2, putative, expressed
MaizeGDB (Corn) Zm00025a020445
Brachypodium KQJ99623
Barley -
Wheat TraesCS6D02G181600 , TraesCSU02G080500 , TraesCSU02G087700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G005000 expressed protein -
2 Sobic.001G295900 AGC_PVPK_like_kin82y.17 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
3 Sobic.002G022600 AP2-like ethylene-responsive transcription factor AINTEGUMENTA, putative, expressed K09285: OVM, AP2-like factor, ANT lineage
4 Sobic.001G051500 - K13179: DDX18, ATP-dependent RNA helicase DDX18/HAS1
5 Sobic.010G189800 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
6 Sobic.010G073300 expressed protein -
7 Sobic.004G192700 dynein light chain type 1 family protein, putative, expressed K10418: dynein light chain LC8-type
8 Sobic.002G276700 protein of unknown function containing protein, expressed -
9 Sobic.004G055800 splicing factor, arginine/serine-rich 12, putative, expressed -
10 Sobic.007G224600 - -
11 Sobic.004G275500 helix-loop-helix DNA-binding protein, putative, expressed -
12 Sobic.007G081300 peptide transporter PTR2, putative, expressed -
13 Sobic.006G227800 leucoanthocyanidin reductase, putative, expressed K08695: anthocyanidin reductase
14 Sobic.002G263900 expressed protein -
15 Sobic.010G081200 expressed protein K09142: methyltransferase
16 Sobic.008G127200 expressed protein -
17 Sobic.001G158000 selT/selW/selH selenoprotein domain containing protein, expressed -
18 Sobic.009G191800 single-stranded DNA-binding protein, putative, expressed -
19 Sobic.003G301200 expressed protein -
20 Sobic.006G259201 - -


Gene co-expression network
sample Sobic004G158000 Sobic004G158000 Sobic006G005000 Sobic006G005000 Sobic004G158000--Sobic006G005000 Sobic001G295900 Sobic001G295900 Sobic004G158000--Sobic001G295900 Sobic002G022600 Sobic002G022600 Sobic004G158000--Sobic002G022600 Sobic001G051500 Sobic001G051500 Sobic004G158000--Sobic001G051500 Sobic010G189800 Sobic010G189800 Sobic004G158000--Sobic010G189800 Sobic010G073300 Sobic010G073300 Sobic004G158000--Sobic010G073300 Sobic004G192700 Sobic004G192700 Sobic004G158000--Sobic004G192700 Sobic002G276700 Sobic002G276700 Sobic004G158000--Sobic002G276700 Sobic004G055800 Sobic004G055800 Sobic004G158000--Sobic004G055800 Sobic007G224600 Sobic007G224600 Sobic006G005000--Sobic007G224600 Sobic001G220200 Sobic001G220200 Sobic006G005000--Sobic001G220200 Sobic007G221800 Sobic007G221800 Sobic006G005000--Sobic007G221800 Sobic004G357033 Sobic004G357033 Sobic006G005000--Sobic004G357033 Sobic001G130900 Sobic001G130900 Sobic006G005000--Sobic001G130900 Sobic006G259201 Sobic006G259201 Sobic006G005000--Sobic006G259201 Sobic010G074980 Sobic010G074980 Sobic006G005000--Sobic010G074980 Sobic009G225300 Sobic009G225300 Sobic006G005000--Sobic009G225300 Sobic006G005000--Sobic004G192700 Sobic001G295900--Sobic006G005000 Sobic007G081300 Sobic007G081300 Sobic001G295900--Sobic007G081300 Sobic004G300500 Sobic004G300500 Sobic001G295900--Sobic004G300500 Sobic001G180300 Sobic001G180300 Sobic001G295900--Sobic001G180300 Sobic003G230300 Sobic003G230300 Sobic001G295900--Sobic003G230300 Sobic001G295900--Sobic004G192700 Sobic004G344301 Sobic004G344301 Sobic001G295900--Sobic004G344301 Sobic001G295900--Sobic010G074980 Sobic002G263900 Sobic002G263900 Sobic001G295900--Sobic002G263900 Sobic004G269900 Sobic004G269900 Sobic002G022600--Sobic004G269900 Sobic006G098400 Sobic006G098400 Sobic002G022600--Sobic006G098400 Sobic002G189300 Sobic002G189300 Sobic002G022600--Sobic002G189300 Sobic003G047300 Sobic003G047300 Sobic002G022600--Sobic003G047300 Sobic001G079600 Sobic001G079600 Sobic002G022600--Sobic001G079600 Sobic009G233600 Sobic009G233600 Sobic002G022600--Sobic009G233600 Sobic010G145200 Sobic010G145200 Sobic002G022600--Sobic010G145200 Sobic008G127200 Sobic008G127200 Sobic002G022600--Sobic008G127200 Sobic005G188400 Sobic005G188400 Sobic002G022600--Sobic005G188400 Sobic002G140100 Sobic002G140100 Sobic001G051500--Sobic002G140100 Sobic001G051500--Sobic004G055800 Sobic001G519300 Sobic001G519300 Sobic001G051500--Sobic001G519300 Sobic006G227800 Sobic006G227800 Sobic001G051500--Sobic006G227800 Sobic001G051500--Sobic007G224600 Sobic001G139600 Sobic001G139600 Sobic001G051500--Sobic001G139600 Sobic001G051500--Sobic002G263900 Sobic002G326050 Sobic002G326050 Sobic001G051500--Sobic002G326050 Sobic001G158000 Sobic001G158000 Sobic001G051500--Sobic001G158000 Sobic010G189800--Sobic007G081300 Sobic010G189800--Sobic004G192700 Sobic003G092200 Sobic003G092200 Sobic010G189800--Sobic003G092200 Sobic006G187600 Sobic006G187600 Sobic010G189800--Sobic006G187600 Sobic010G189800--Sobic010G073300 Sobic007G149600 Sobic007G149600 Sobic010G189800--Sobic007G149600 Sobic004G227000 Sobic004G227000 Sobic010G189800--Sobic004G227000 Sobic003G301200 Sobic003G301200 Sobic010G189800--Sobic003G301200 Sobic001G441800 Sobic001G441800 Sobic010G189800--Sobic001G441800 Sobic002G284901 Sobic002G284901 Sobic010G073300--Sobic002G284901 Sobic003G120400 Sobic003G120400 Sobic010G073300--Sobic003G120400 Sobic001G525000 Sobic001G525000 Sobic010G073300--Sobic001G525000 Sobic002G320900 Sobic002G320900 Sobic010G073300--Sobic002G320900 Sobic002G430200 Sobic002G430200 Sobic010G073300--Sobic002G430200 Sobic010G073300--Sobic001G130900 Sobic003G200501 Sobic003G200501 Sobic010G073300--Sobic003G200501 Sobic002G387100 Sobic002G387100 Sobic010G073300--Sobic002G387100 Sobic002G210200 Sobic002G210200 Sobic010G073300--Sobic002G210200 Sobic004G265400 Sobic004G265400 Sobic004G192700--Sobic004G265400 Sobic003G067500 Sobic003G067500 Sobic004G192700--Sobic003G067500 Sobic004G192700--Sobic007G149600 Sobic004G192700--Sobic003G200501 Sobic004G192700--Sobic002G210200 Sobic004G192700--Sobic007G221800 Sobic004G192700--Sobic010G073300 Sobic003G067300 Sobic003G067300 Sobic004G192700--Sobic003G067300 Sobic004G192700--Sobic002G284901 Sobic002G276700--Sobic001G441800 Sobic003G350100 Sobic003G350100 Sobic002G276700--Sobic003G350100 Sobic008G133100 Sobic008G133100 Sobic002G276700--Sobic008G133100 Sobic002G276700--Sobic003G067300 Sobic002G276700--Sobic002G387100 Sobic002G284800 Sobic002G284800 Sobic002G276700--Sobic002G284800 Sobic002G276700--Sobic002G430200 Sobic001G193400 Sobic001G193400 Sobic002G276700--Sobic001G193400 Sobic007G122300 Sobic007G122300 Sobic002G276700--Sobic007G122300 Sobic004G055800--Sobic002G140100 Sobic004G055800--Sobic001G220200 Sobic001G197500 Sobic001G197500 Sobic004G055800--Sobic001G197500 Sobic004G055800--Sobic006G005000 Sobic004G055800--Sobic006G227800 Sobic004G055800--Sobic006G259201 Sobic004G055800--Sobic007G224600 Sobic004G055800--Sobic001G519300 Sobic010G096801 Sobic010G096801 Sobic004G055800--Sobic010G096801
Octagon: transcription factors


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