Gene annotation
Transcriptome id Sobic.003G278900.1,Sobic.003G278900.2
Synonym Sb03g033070
Functional annotation strictosidine synthase, putative, expressed
UniProt A0A1W0VZ88 , C5XIC6
Pfam PF03088
Panther DB PTHR10426 PTHR10426:SF34
NCBI CDD KOG1520; Predicted alkaloid synthase/Surface mucin Hemomucin
KEGG Orthology -
Gene Ontology GO:0016844; strictosidine synthase activity GO:0009058biosynthetic process


Orthologs (automatic annotation)
TAIR AT3G57030 : Calcium-dependent phosphotriesterase superfamily protein
RAP-DB (Rice) LOC_Os08g07810.1 : strictosidine synthase, putative, expressed
MaizeGDB (Corn) Zm00025a039537 , Zm00025a039639 , Zm00025a002405 , Zm00025a002403 , Zm00025a002402 , Zm00025a002400 , Zm00025a039540 , Zm00025a002406 , Zm00025a039641
Brachypodium KQK10870
Barley HORVU2Hr1G013460.2 , HORVU2Hr1G013460.3 , HORVU2Hr1G013460.1 , HORVU5Hr1G093840.3 , HORVU5Hr1G093840.2 , HORVU5Hr1G093840.1 , HORVU2Hr1G012970.4 , HORVU2Hr1G012970.3 , HORVU2Hr1G012970.2 , HORVU2Hr1G012970.1 , HORVU3Hr1G065520.3 , HORVU5Hr1G009400.1 , HORVU5Hr1G009400.2 , HORVU3Hr1G065520.2 , HORVU6Hr1G026020.2 , HORVU6Hr1G026020.3 , HORVU6Hr1G026020.1 , HORVU3Hr1G065520.1 , HORVU6Hr1G026020.4
Wheat TraesCS2D02G076200 , TraesCS2D02G076000 , TraesCS2B02G092900 , TraesCS5B02G383000 , TraesCS5B02G382800 , TraesCS3B02G289800 , TraesCS3D02G256900 , TraesCS5D02G389100 , TraesCS3A02G256600 , TraesCS2A02G078000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G320500 expressed protein -
2 Sobic.002G032100 - -
3 Sobic.002G027300 ZOS1-07 - C2H2 zinc finger protein, expressed -
4 Sobic.006G068200 expressed protein -
5 Sobic.004G215400 SMP-30/Gluconolaconase/LRE-like region containing protein, expressed -
6 Sobic.005G180000 OsMADS87 - MADS-box family gene with M-gamma type-box, expressed -
7 Sobic.001G273200 transferase family protein, putative, expressed -
8 Sobic.005G179800 OsMADS87 - MADS-box family gene with M-gamma type-box, expressed -
9 Sobic.006G140801 - -
10 Sobic.006G185600 HOTHEAD precursor, putative, expressed K00108: betA, choline dehydrogenase
11 Sobic.001G511800 expressed protein -
12 Sobic.003G347100 - -
13 Sobic.004G041700 expressed protein -
14 Sobic.007G188400 expressed protein -
15 Sobic.005G118700 expressed protein -
16 Sobic.008G176200 - -
17 Sobic.001G108100 expressed protein -
18 Sobic.010G087600 heat shock 22 kDa protein, mitochondrial precursor, putative, expressed K13993: HSP20 family protein
19 Sobic.005G055400 amidase family protein, putative, expressed -
20 Sobic.004G215500 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic003G278900 Sobic003G278900 Sobic001G320500 Sobic001G320500 Sobic003G278900--Sobic001G320500 Sobic002G032100 Sobic002G032100 Sobic003G278900--Sobic002G032100 Sobic002G027300 Sobic002G027300 Sobic003G278900--Sobic002G027300 Sobic006G068200 Sobic006G068200 Sobic003G278900--Sobic006G068200 Sobic004G215400 Sobic004G215400 Sobic003G278900--Sobic004G215400 Sobic005G180000 Sobic005G180000 Sobic003G278900--Sobic005G180000 Sobic001G273200 Sobic001G273200 Sobic003G278900--Sobic001G273200 Sobic005G179800 Sobic005G179800 Sobic003G278900--Sobic005G179800 Sobic006G140801 Sobic006G140801 Sobic003G278900--Sobic006G140801 Sobic001G320500--Sobic003G278900 Sobic001G108100 Sobic001G108100 Sobic001G320500--Sobic001G108100 Sobic001G320500--Sobic004G215400 Sobic001G320500--Sobic006G068200 Sobic001G320500--Sobic006G140801 Sobic010G014700 Sobic010G014700 Sobic001G320500--Sobic010G014700 Sobic009G146700 Sobic009G146700 Sobic001G320500--Sobic009G146700 Sobic010G087600 Sobic010G087600 Sobic001G320500--Sobic010G087600 Sobic004G313200 Sobic004G313200 Sobic001G320500--Sobic004G313200 Sobic002G032100--Sobic002G027300 Sobic002G032100--Sobic006G068200 Sobic002G032100--Sobic004G215400 Sobic004G215500 Sobic004G215500 Sobic002G032100--Sobic004G215500 Sobic002G032100--Sobic005G180000 Sobic002G032100--Sobic001G273200 Sobic002G032100--Sobic005G179800 Sobic003G347100 Sobic003G347100 Sobic002G032100--Sobic003G347100 Sobic006G185600 Sobic006G185600 Sobic002G032100--Sobic006G185600 Sobic002G027300--Sobic002G027300 Sobic002G027300--Sobic006G068200 Sobic002G027300--Sobic004G215400 Sobic002G027300--Sobic004G215500 Sobic002G027300--Sobic005G180000 Sobic002G027300--Sobic001G273200 Sobic002G027300--Sobic005G179800 Sobic002G027300--Sobic003G347100 Sobic002G027300--Sobic006G185600 Sobic006G068200--Sobic004G215400 Sobic006G068200--Sobic001G273200 Sobic006G068200--Sobic005G180000 Sobic006G068200--Sobic002G032100 Sobic006G068200--Sobic002G027300 Sobic006G068200--Sobic006G185600 Sobic006G068200--Sobic005G179800 Sobic006G068200--Sobic001G108100 Sobic006G068200--Sobic010G087600 Sobic004G215400--Sobic006G068200 Sobic004G215400--Sobic010G087600 Sobic004G215400--Sobic005G180000 Sobic004G215400--Sobic006G185600 Sobic004G215400--Sobic001G273200 Sobic004G215400--Sobic005G179800 Sobic004G215400--Sobic010G014700 Sobic004G215400--Sobic001G108100 Sobic004G215400--Sobic002G032100 Sobic005G180000--Sobic005G179800 Sobic005G180000--Sobic006G185600 Sobic005G180000--Sobic001G273200 Sobic005G118700 Sobic005G118700 Sobic005G180000--Sobic005G118700 Sobic005G180000--Sobic004G215400 Sobic005G180000--Sobic006G068200 Sobic008G013400 Sobic008G013400 Sobic005G180000--Sobic008G013400 Sobic006G089700 Sobic006G089700 Sobic005G180000--Sobic006G089700 Sobic005G180000--Sobic003G347100 Sobic001G273200--Sobic005G180000 Sobic001G273200--Sobic005G179800 Sobic001G273200--Sobic006G185600 Sobic001G273200--Sobic006G068200 Sobic001G273200--Sobic005G118700 Sobic001G273200--Sobic004G215400 Sobic001G273200--Sobic008G013400 Sobic001G273200--Sobic002G032100 Sobic001G273200--Sobic002G027300 Sobic005G179800--Sobic005G180000 Sobic005G179800--Sobic006G185600 Sobic005G179800--Sobic001G273200 Sobic005G179800--Sobic005G118700 Sobic005G179800--Sobic008G013400 Sobic005G179800--Sobic006G089700 Sobic005G179800--Sobic004G215400 Sobic005G179800--Sobic006G068200 Sobic004G202800 Sobic004G202800 Sobic005G179800--Sobic004G202800 Sobic006G140801--Sobic010G014700 Sobic007G160300 Sobic007G160300 Sobic006G140801--Sobic007G160300 Sobic006G140801--Sobic009G146700 Sobic001G074000 Sobic001G074000 Sobic006G140801--Sobic001G074000 Sobic003G070600 Sobic003G070600 Sobic006G140801--Sobic003G070600 Sobic004G317200 Sobic004G317200 Sobic006G140801--Sobic004G317200 Sobic003G338700 Sobic003G338700 Sobic006G140801--Sobic003G338700 Sobic006G274200 Sobic006G274200 Sobic006G140801--Sobic006G274200 Sobic004G211700 Sobic004G211700 Sobic006G140801--Sobic004G211700
Octagon: transcription factors


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