Gene annotation
Transcriptome id Sobic.003G336700.1
Synonym Sb03g038090
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XN88
Pfam PF08263 PF13855 PF07714
Panther DB PTHR27003 PTHR27003:SF96
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G06840 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os05g40270.5 : expressed protein
MaizeGDB (Corn) Zm00025a027074
Brachypodium PNT71048 , PNT71046 , PNT71047 , PNT71044 , PNT71045 , PNT71042 , PNT71043 , KQK10332 , KQK10330 , KQK10331
Barley HORVU3Hr1G080650.4 , HORVU3Hr1G080650.5 , HORVU3Hr1G080650.6 , HORVU3Hr1G080650.7 , HORVU3Hr1G080650.1 , HORVU3Hr1G080650.2 , HORVU3Hr1G080650.3 , HORVU3Hr1G080650.8 , HORVU3Hr1G080650.9 , HORVU3Hr1G080650.12 , HORVU3Hr1G080650.11
Wheat TraesCS1D02G302000 , TraesCS3A02G342000 , TraesCS3A02G342000 , TraesCS3D02G335700 , TraesCS3D02G335700 , TraesCS3D02G335600 , TraesCS1B02G312800 , TraesCS1A02G302600 , TraesCS1A02G302600 , TraesCS3B02G374100 , TraesCS3B02G374100 , TraesCS3B02G373900 , TraesCS3D02G335700 , TraesCS3A02G341900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G263900 reticulon domain containing protein, putative, expressed -
2 Sobic.001G383200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@bromodomain domain containing protein, expressed -
3 Sobic.006G255200 - -
4 Sobic.009G088300 SHR5-receptor-like kinase, putative, expressed -
5 Sobic.002G398600 cytochrome P450 72A1, putative, expressed K15639: CYP734A1, PHYB activation tagged suppressor 1
6 Sobic.004G072201 - -
7 Sobic.001G109400 glycosyl hydrolases family 17, putative, expressed -
8 Sobic.002G187900 expressed protein -
9 Sobic.002G309300 beta-expansin precursor, putative, expressed -
10 Sobic.006G268100 UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
11 Sobic.003G312600 expressed protein -
12 Sobic.010G133450 - -
13 Sobic.001G370800 - -
14 Sobic.008G037300 RCN1 Centroradialis-like1 homogous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed -
15 Sobic.006G249600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@MBTB14 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed -
16 Sobic.004G218400 - -
17 Sobic.001G424650 - -
18 Sobic.001G038700 membrane associated DUF588 domain containing protein, putative, expressed -
19 Sobic.008G142200 serine/threonine-protein kinase BRI1-like 2 precursor, putative, expressed -
20 Sobic.009G094200 - -


Gene co-expression network
sample Sobic003G336700 Sobic003G336700 Sobic003G263900 Sobic003G263900 Sobic003G336700--Sobic003G263900 Sobic001G383200 Sobic001G383200 Sobic003G336700--Sobic001G383200 Sobic006G255200 Sobic006G255200 Sobic003G336700--Sobic006G255200 Sobic009G088300 Sobic009G088300 Sobic003G336700--Sobic009G088300 Sobic002G398600 Sobic002G398600 Sobic003G336700--Sobic002G398600 Sobic004G072201 Sobic004G072201 Sobic003G336700--Sobic004G072201 Sobic001G109400 Sobic001G109400 Sobic003G336700--Sobic001G109400 Sobic002G187900 Sobic002G187900 Sobic003G336700--Sobic002G187900 Sobic002G309300 Sobic002G309300 Sobic003G336700--Sobic002G309300 Sobic003G263900--Sobic002G187900 Sobic001G038700 Sobic001G038700 Sobic003G263900--Sobic001G038700 Sobic003G263900--Sobic006G255200 Sobic008G142200 Sobic008G142200 Sobic003G263900--Sobic008G142200 Sobic004G127600 Sobic004G127600 Sobic003G263900--Sobic004G127600 Sobic003G263900--Sobic002G398600 Sobic006G249600 Sobic006G249600 Sobic003G263900--Sobic006G249600 Sobic004G227700 Sobic004G227700 Sobic003G263900--Sobic004G227700 Sobic003G263900--Sobic004G072201 Sobic001G383200--Sobic004G072201 Sobic001G383200--Sobic001G109400 Sobic002G374000 Sobic002G374000 Sobic001G383200--Sobic002G374000 Sobic001G383200--Sobic002G309300 Sobic001G383200--Sobic003G263900 Sobic006G157450 Sobic006G157450 Sobic001G383200--Sobic006G157450 Sobic001G383200--Sobic001G038700 Sobic008G103400 Sobic008G103400 Sobic001G383200--Sobic008G103400 Sobic001G383200--Sobic006G255200 Sobic006G255200--Sobic002G187900 Sobic006G255200--Sobic003G263900 Sobic006G255200--Sobic002G309300 Sobic001G442000 Sobic001G442000 Sobic006G255200--Sobic001G442000 Sobic006G255200--Sobic004G127600 Sobic006G255200--Sobic004G072201 Sobic006G255200--Sobic001G109400 Sobic004G218400 Sobic004G218400 Sobic006G255200--Sobic004G218400 Sobic001G370800 Sobic001G370800 Sobic006G255200--Sobic001G370800 Sobic001G424650 Sobic001G424650 Sobic009G088300--Sobic001G424650 Sobic010G129100 Sobic010G129100 Sobic009G088300--Sobic010G129100 Sobic009G088300--Sobic001G370800 Sobic009G088300--Sobic001G442000 Sobic009G088300--Sobic006G255200 Sobic001G492400 Sobic001G492400 Sobic009G088300--Sobic001G492400 Sobic001G334400 Sobic001G334400 Sobic009G088300--Sobic001G334400 Sobic009G088300--Sobic003G263900 Sobic002G262850 Sobic002G262850 Sobic009G088300--Sobic002G262850 Sobic002G398600--Sobic006G249600 Sobic004G173200 Sobic004G173200 Sobic002G398600--Sobic004G173200 Sobic002G398600--Sobic003G263900 Sobic002G398600--Sobic002G187900 Sobic009G223900 Sobic009G223900 Sobic002G398600--Sobic009G223900 Sobic008G192900 Sobic008G192900 Sobic002G398600--Sobic008G192900 Sobic001G212900 Sobic001G212900 Sobic002G398600--Sobic001G212900 Sobic002G398600--Sobic008G103400 Sobic008G016800 Sobic008G016800 Sobic002G398600--Sobic008G016800 Sobic004G072201--Sobic001G383200 Sobic004G072201--Sobic002G374000 Sobic004G072201--Sobic001G109400 Sobic004G072201--Sobic002G309300 Sobic004G072201--Sobic001G038700 Sobic004G072201--Sobic001G442000 Sobic004G072201--Sobic006G255200 Sobic004G072201--Sobic003G263900 Sobic007G183600 Sobic007G183600 Sobic004G072201--Sobic007G183600 Sobic001G109400--Sobic001G212900 Sobic001G109400--Sobic004G072201 Sobic001G109400--Sobic002G374000 Sobic001G109400--Sobic002G187900 Sobic001G109400--Sobic001G383200 Sobic001G109400--Sobic006G249600 Sobic001G109400--Sobic006G255200 Sobic004G315400 Sobic004G315400 Sobic001G109400--Sobic004G315400 Sobic001G109400--Sobic008G016800 Sobic002G187900--Sobic003G263900 Sobic002G187900--Sobic006G255200 Sobic002G187900--Sobic004G127600 Sobic002G187900--Sobic006G249600 Sobic002G187900--Sobic001G109400 Sobic002G187900--Sobic001G212900 Sobic002G187900--Sobic004G227700 Sobic002G187900--Sobic004G173200 Sobic002G187900--Sobic002G398600 Sobic002G309300--Sobic004G218400 Sobic002G309300--Sobic001G038700 Sobic002G309300--Sobic004G072201 Sobic002G309300--Sobic006G255200 Sobic006G268100 Sobic006G268100 Sobic002G309300--Sobic006G268100 Sobic002G309300--Sobic001G370800 Sobic009G026600 Sobic009G026600 Sobic002G309300--Sobic009G026600 Sobic002G309300--Sobic001G442000 Sobic008G037300 Sobic008G037300 Sobic002G309300--Sobic008G037300
Octagon: transcription factors


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