Gene annotation
Transcriptome id Sobic.003G348600.1
Synonym
Functional annotation hydrolase, alpha/beta fold family domain containing protein, expressed
UniProt C5XP27
Pfam PF12695
Panther DB PTHR11614 PTHR11614:SF109
NCBI CDD KOG1455; Lysophospholipase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G39420 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g62010.1 : hydrolase, alpha/beta fold family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026948
Brachypodium -
Barley HORVU3Hr1G087040.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G161800 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.001G039200 expressed protein -
3 Sobic.006G011900 dirigent, putative -
4 Sobic.005G072900 stress responsive protein, putative, expressed -
5 Sobic.010G003600 LTPL127 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.001G176400 cytochrome P450, putative, expressed -
7 Sobic.001G348300 expressed protein -
8 Sobic.005G014000 WRKY64, expressed -
9 Sobic.005G063400 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
10 Sobic.001G301300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expansin precursor, putative, expressed -
11 Sobic.008G128066 - -
12 Sobic.007G015200 cytochrome P450, putative, expressed -
13 Sobic.009G230900 expressed protein -
14 Sobic.005G065900 glycine-rich cell wall structural protein 2 precursor, putative, expressed -
15 Sobic.010G272300 cysteine-rich receptor-like protein kinase 28 precursor, putative, expressed -
16 Sobic.002G377700 caltractin, putative, expressed -
17 Sobic.009G199001 - -
18 Sobic.006G256900 dirigent-like protein pDIR17, putative, expressed -
19 Sobic.003G152200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.010G160900 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic003G348600 Sobic003G348600 Sobic010G161800 Sobic010G161800 Sobic003G348600--Sobic010G161800 Sobic001G039200 Sobic001G039200 Sobic003G348600--Sobic001G039200 Sobic006G011900 Sobic006G011900 Sobic003G348600--Sobic006G011900 Sobic005G072900 Sobic005G072900 Sobic003G348600--Sobic005G072900 Sobic010G003600 Sobic010G003600 Sobic003G348600--Sobic010G003600 Sobic001G176400 Sobic001G176400 Sobic003G348600--Sobic001G176400 Sobic001G348300 Sobic001G348300 Sobic003G348600--Sobic001G348300 Sobic005G014000 Sobic005G014000 Sobic003G348600--Sobic005G014000 Sobic005G063400 Sobic005G063400 Sobic003G348600--Sobic005G063400 Sobic006G122800 Sobic006G122800 Sobic010G161800--Sobic006G122800 Sobic002G425000 Sobic002G425000 Sobic010G161800--Sobic002G425000 Sobic010G161800--Sobic005G063400 Sobic006G260200 Sobic006G260200 Sobic010G161800--Sobic006G260200 Sobic002G053700 Sobic002G053700 Sobic010G161800--Sobic002G053700 Sobic003G384700 Sobic003G384700 Sobic010G161800--Sobic003G384700 Sobic010G161800--Sobic005G072900 Sobic006G174300 Sobic006G174300 Sobic010G161800--Sobic006G174300 Sobic007G050200 Sobic007G050200 Sobic010G161800--Sobic007G050200 Sobic001G340400 Sobic001G340400 Sobic001G039200--Sobic001G340400 Sobic006G150700 Sobic006G150700 Sobic001G039200--Sobic006G150700 Sobic008G144600 Sobic008G144600 Sobic001G039200--Sobic008G144600 Sobic001G176300 Sobic001G176300 Sobic001G039200--Sobic001G176300 Sobic001G039200--Sobic005G014000 Sobic003G053300 Sobic003G053300 Sobic001G039200--Sobic003G053300 Sobic001G039200--Sobic001G348300 Sobic005G063300 Sobic005G063300 Sobic001G039200--Sobic005G063300 Sobic009G035300 Sobic009G035300 Sobic001G039200--Sobic009G035300 Sobic006G011900--Sobic003G348600 Sobic006G011900--Sobic010G161800 Sobic009G079925 Sobic009G079925 Sobic006G011900--Sobic009G079925 Sobic007G215900 Sobic007G215900 Sobic006G011900--Sobic007G215900 Sobic008G076300 Sobic008G076300 Sobic006G011900--Sobic008G076300 Sobic006G011900--Sobic010G003600 Sobic008G128066 Sobic008G128066 Sobic006G011900--Sobic008G128066 Sobic006G011900--Sobic001G039200 Sobic003G011600 Sobic003G011600 Sobic006G011900--Sobic003G011600 Sobic005G202300 Sobic005G202300 Sobic005G072900--Sobic005G202300 Sobic006G277700 Sobic006G277700 Sobic005G072900--Sobic006G277700 Sobic003G020200 Sobic003G020200 Sobic005G072900--Sobic003G020200 Sobic005G072900--Sobic005G063400 Sobic003G319400 Sobic003G319400 Sobic005G072900--Sobic003G319400 Sobic005G072900--Sobic006G174300 Sobic004G029400 Sobic004G029400 Sobic005G072900--Sobic004G029400 Sobic001G506800 Sobic001G506800 Sobic005G072900--Sobic001G506800 Sobic006G106900 Sobic006G106900 Sobic005G072900--Sobic006G106900 Sobic005G066100 Sobic005G066100 Sobic010G003600--Sobic005G066100 Sobic010G003600--Sobic010G161800 Sobic001G237900 Sobic001G237900 Sobic010G003600--Sobic001G237900 Sobic005G066432 Sobic005G066432 Sobic010G003600--Sobic005G066432 Sobic001G238300 Sobic001G238300 Sobic010G003600--Sobic001G238300 Sobic001G301300 Sobic001G301300 Sobic010G003600--Sobic001G301300 Sobic010G234400 Sobic010G234400 Sobic010G003600--Sobic010G234400 Sobic010G003600--Sobic008G128066 Sobic010G003600--Sobic002G425000 Sobic001G147900 Sobic001G147900 Sobic001G176400--Sobic001G147900 Sobic006G256900 Sobic006G256900 Sobic001G176400--Sobic006G256900 Sobic004G227800 Sobic004G227800 Sobic001G176400--Sobic004G227800 Sobic010G272300 Sobic010G272300 Sobic001G176400--Sobic010G272300 Sobic004G024100 Sobic004G024100 Sobic001G176400--Sobic004G024100 Sobic005G203200 Sobic005G203200 Sobic001G176400--Sobic005G203200 Sobic003G152200 Sobic003G152200 Sobic001G176400--Sobic003G152200 Sobic010G194100 Sobic010G194100 Sobic001G176400--Sobic010G194100 Sobic006G197100 Sobic006G197100 Sobic001G176400--Sobic006G197100 Sobic001G348300--Sobic002G053700 Sobic001G348300--Sobic001G176300 Sobic001G348500 Sobic001G348500 Sobic001G348300--Sobic001G348500 Sobic001G348300--Sobic001G039200 Sobic001G348300--Sobic005G063400 Sobic001G348300--Sobic002G425000 Sobic001G348300--Sobic010G161800 Sobic001G348300--Sobic001G340400 Sobic001G348300--Sobic006G122800 Sobic006G019200 Sobic006G019200 Sobic005G014000--Sobic006G019200 Sobic005G014000--Sobic001G039200 Sobic005G014000--Sobic008G144600 Sobic005G014000--Sobic001G237900 Sobic010G226400 Sobic010G226400 Sobic005G014000--Sobic010G226400 Sobic002G093700 Sobic002G093700 Sobic005G014000--Sobic002G093700 Sobic001G487400 Sobic001G487400 Sobic005G014000--Sobic001G487400 Sobic005G014000--Sobic001G340400 Sobic005G014000--Sobic010G003600 Sobic003G053600 Sobic003G053600 Sobic005G063400--Sobic003G053600 Sobic005G063400--Sobic002G053700 Sobic004G009400 Sobic004G009400 Sobic005G063400--Sobic004G009400 Sobic007G057400 Sobic007G057400 Sobic005G063400--Sobic007G057400 Sobic005G063400--Sobic006G122800 Sobic002G101400 Sobic002G101400 Sobic005G063400--Sobic002G101400 Sobic005G063400--Sobic006G277700 Sobic009G088500 Sobic009G088500 Sobic005G063400--Sobic009G088500 Sobic005G063400--Sobic006G174300
Octagon: transcription factors


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