Gene annotation
Transcriptome id Sobic.004G015500.1
Synonym Sb04g001470
Functional annotation receptor kinase, putative, expressed
UniProt C5XSE3
Pfam PF00560 PF08263 PF00069 PF13855
Panther DB PTHR27000 PTHR27000:SF164
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G47570 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os01g05960.1 : receptor kinase, putative, expressed
MaizeGDB (Corn) Zm00025a035041
Brachypodium KQK02274
Barley HORVU3Hr1G011710.18 , HORVU3Hr1G011710.17 , HORVU3Hr1G011710.16 , HORVU3Hr1G011710.15 , HORVU3Hr1G011710.14 , HORVU3Hr1G011710.13 , HORVU3Hr1G011710.12 , HORVU3Hr1G011710.11 , HORVU3Hr1G011710.10 , HORVU3Hr1G011710.22 , HORVU3Hr1G011710.23 , HORVU3Hr1G011710.20 , HORVU3Hr1G011710.21 , HORVU3Hr1G011710.7 , HORVU3Hr1G011710.6 , HORVU3Hr1G011710.5 , HORVU3Hr1G011710.4 , HORVU3Hr1G011710.3 , HORVU3Hr1G011710.2 , HORVU3Hr1G011710.9 , HORVU3Hr1G011710.8 , HORVU3Hr1G011710.1
Wheat TraesCSU02G109100 , TraesCS1B02G004700 , TraesCS7A02G461300 , TraesCS6D02G051900 , TraesCS5D02G263300 , TraesCS4B02G360600 , TraesCS3A02G061400 , TraesCS6A02G018400 , TraesCS6A02G004100 , TraesCS4B02G360600 , TraesCS6B02G025400 , TraesCS7B02G362800 , TraesCS7D02G449500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G060701 - K07964: heparanase
2 Sobic.008G185000 - -
3 Sobic.002G312600 NBS-LRR disease resistance protein, putative, expressed -
4 Sobic.006G093400 potassium channel SKOR, putative, expressed -
5 Sobic.001G191400 zinc finger C3HC4 type family protein, putative, expressed K10695: E3 ubiquitin-protein ligase RNF1/2
6 Sobic.001G490600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed -
7 Sobic.001G312801 - -
8 Sobic.005G155001 - -
9 Sobic.007G213500 expressed protein -
10 Sobic.009G170301 - -
11 Sobic.007G189900 membrane associated DUF588 domain containing protein, putative, expressed -
12 Sobic.010G220100 cell cycle control protein, putative, expressed -
13 Sobic.002G360701 - -
14 Sobic.006G269300 - -
15 Sobic.001G368000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@annexin, putative, expressed -
16 Sobic.001G068901 - -
17 Sobic.003G096400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@protein kinase domain containing protein, expressed -
18 Sobic.001G483200 ataxin-2 C-terminal region family protein, expressed -
19 Sobic.010G257300 serine esterase, putative, expressed K15889: prenylcysteine alpha-carboxyl methylesterase
20 Sobic.003G336300 C2 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic004G015500 Sobic004G015500 Sobic010G060701 Sobic010G060701 Sobic004G015500--Sobic010G060701 Sobic008G185000 Sobic008G185000 Sobic004G015500--Sobic008G185000 Sobic002G312600 Sobic002G312600 Sobic004G015500--Sobic002G312600 Sobic006G093400 Sobic006G093400 Sobic004G015500--Sobic006G093400 Sobic001G191400 Sobic001G191400 Sobic004G015500--Sobic001G191400 Sobic001G490600 Sobic001G490600 Sobic004G015500--Sobic001G490600 Sobic001G312801 Sobic001G312801 Sobic004G015500--Sobic001G312801 Sobic005G155001 Sobic005G155001 Sobic004G015500--Sobic005G155001 Sobic007G213500 Sobic007G213500 Sobic004G015500--Sobic007G213500 Sobic010G060701--Sobic008G185000 Sobic010G060701--Sobic001G490600 Sobic009G170301 Sobic009G170301 Sobic010G060701--Sobic009G170301 Sobic010G060701--Sobic006G093400 Sobic002G252700 Sobic002G252700 Sobic010G060701--Sobic002G252700 Sobic010G257300 Sobic010G257300 Sobic010G060701--Sobic010G257300 Sobic001G400101 Sobic001G400101 Sobic010G060701--Sobic001G400101 Sobic004G205400 Sobic004G205400 Sobic010G060701--Sobic004G205400 Sobic010G060701--Sobic004G015500 Sobic008G185000--Sobic005G155001 Sobic009G004500 Sobic009G004500 Sobic008G185000--Sobic009G004500 Sobic001G483200 Sobic001G483200 Sobic008G185000--Sobic001G483200 Sobic008G185000--Sobic001G490600 Sobic010G021401 Sobic010G021401 Sobic008G185000--Sobic010G021401 Sobic001G368000 Sobic001G368000 Sobic008G185000--Sobic001G368000 Sobic007G017300 Sobic007G017300 Sobic008G185000--Sobic007G017300 Sobic009G114900 Sobic009G114900 Sobic008G185000--Sobic009G114900 Sobic008G185000--Sobic002G252700 Sobic004G102301 Sobic004G102301 Sobic002G312600--Sobic004G102301 Sobic002G312600--Sobic009G170301 Sobic001G204200 Sobic001G204200 Sobic002G312600--Sobic001G204200 Sobic005G094500 Sobic005G094500 Sobic002G312600--Sobic005G094500 Sobic002G076932 Sobic002G076932 Sobic002G312600--Sobic002G076932 Sobic009G235100 Sobic009G235100 Sobic002G312600--Sobic009G235100 Sobic001G206800 Sobic001G206800 Sobic002G312600--Sobic001G206800 Sobic002G312600--Sobic006G093400 Sobic003G155350 Sobic003G155350 Sobic002G312600--Sobic003G155350 Sobic006G093400--Sobic010G257300 Sobic001G068901 Sobic001G068901 Sobic006G093400--Sobic001G068901 Sobic006G232300 Sobic006G232300 Sobic006G093400--Sobic006G232300 Sobic006G093400--Sobic009G114900 Sobic010G253700 Sobic010G253700 Sobic006G093400--Sobic010G253700 Sobic004G012100 Sobic004G012100 Sobic006G093400--Sobic004G012100 Sobic006G093400--Sobic005G155001 Sobic006G093400--Sobic001G483200 Sobic001G537600 Sobic001G537600 Sobic006G093400--Sobic001G537600 Sobic004G337700 Sobic004G337700 Sobic001G191400--Sobic004G337700 Sobic007G090406 Sobic007G090406 Sobic001G191400--Sobic007G090406 Sobic001G191400--Sobic005G155001 Sobic001G191400--Sobic009G114900 Sobic001G191400--Sobic010G021401 Sobic003G030200 Sobic003G030200 Sobic001G191400--Sobic003G030200 Sobic005G204900 Sobic005G204900 Sobic001G191400--Sobic005G204900 Sobic001G341900 Sobic001G341900 Sobic001G191400--Sobic001G341900 Sobic001G191400--Sobic001G490600 Sobic009G184500 Sobic009G184500 Sobic001G490600--Sobic009G184500 Sobic001G490600--Sobic001G368000 Sobic001G490600--Sobic007G017300 Sobic001G490600--Sobic009G004500 Sobic001G490600--Sobic001G312801 Sobic001G490600--Sobic008G185000 Sobic001G490600--Sobic009G170301 Sobic001G490600--Sobic001G483200 Sobic001G490600--Sobic005G155001 Sobic004G288900 Sobic004G288900 Sobic001G312801--Sobic004G288900 Sobic001G312801--Sobic001G490600 Sobic001G312801--Sobic001G368000 Sobic001G312801--Sobic009G184500 Sobic004G190800 Sobic004G190800 Sobic001G312801--Sobic004G190800 Sobic001G312801--Sobic007G017300 Sobic001G312801--Sobic009G170301 Sobic008G096300 Sobic008G096300 Sobic001G312801--Sobic008G096300 Sobic002G138200 Sobic002G138200 Sobic001G312801--Sobic002G138200 Sobic005G155001--Sobic001G483200 Sobic005G155001--Sobic009G114900 Sobic005G155001--Sobic009G004500 Sobic005G155001--Sobic007G017300 Sobic005G155001--Sobic010G021401 Sobic001G527900 Sobic001G527900 Sobic005G155001--Sobic001G527900 Sobic005G155001--Sobic001G368000 Sobic005G155001--Sobic008G185000 Sobic005G155001--Sobic007G090406 Sobic004G026000 Sobic004G026000 Sobic007G213500--Sobic004G026000 Sobic006G121200 Sobic006G121200 Sobic007G213500--Sobic006G121200 Sobic004G314100 Sobic004G314100 Sobic007G213500--Sobic004G314100 Sobic007G213500--Sobic007G017300 Sobic007G213500--Sobic001G483200 Sobic007G213500--Sobic001G368000 Sobic003G106100 Sobic003G106100 Sobic007G213500--Sobic003G106100 Sobic007G061500 Sobic007G061500 Sobic007G213500--Sobic007G061500 Sobic001G104100 Sobic001G104100 Sobic007G213500--Sobic001G104100
Octagon: transcription factors


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