Gene annotation
Transcriptome id Sobic.004G019700.1
Synonym Sb04g001830
Functional annotation expressed protein
UniProt A0A1Z5RKJ6
Pfam PF01909 PF03828
Panther DB PTHR12271 PTHR12271:SF53
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016779; nucleotidyltransferase activity


Orthologs (automatic annotation)
TAIR AT2G45620 : Nucleotidyltransferase family protein
RAP-DB (Rice) LOC_Os02g02970.1 : expressed protein
MaizeGDB (Corn) Zm00025a018772
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G124500 elongation of fatty acids protein 2, putative, expressed -
2 Sobic.004G192001 - -
3 Sobic.008G013700 - -
4 Sobic.003G378500 expressed protein -
5 Sobic.007G099300 - -
6 Sobic.010G178700 transferase family protein, putative, expressed -
7 Sobic.001G302100 holliday junction resolvase, putative, expressed K07447: putative holliday junction resolvase
8 Sobic.004G125600 - -
9 Sobic.006G142700 expressed protein -
10 Sobic.010G111900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
11 Sobic.003G249300 expressed protein -
12 Sobic.009G038800 SLD5 - Putative GINS complex subunit, expressed K10735: GINS4, GINS complex subunit 4
13 Sobic.004G125701 - -
14 Sobic.009G250000 helix-loop-helix DNA-binding protein, putative, expressed -
15 Sobic.007G047450 - -
16 Sobic.008G064900 growth regulator related protein, putative, expressed -
17 Sobic.004G260700 - -
18 Sobic.008G173700 cyclic nucleotide-gated ion channel, putative, expressed K05391: cyclic nucleotide gated channel, plant
19 Sobic.001G520200 glycosylphosphatidylinositol anchor biosynthesis protein 11, putative, expressed K05287: GPI ethanolamine phosphate transferase 2/3 subunit F
20 Sobic.001G345366 - -


Gene co-expression network
sample Sobic004G019700 Sobic004G019700 Sobic001G124500 Sobic001G124500 Sobic004G019700--Sobic001G124500 Sobic004G192001 Sobic004G192001 Sobic004G019700--Sobic004G192001 Sobic008G013700 Sobic008G013700 Sobic004G019700--Sobic008G013700 Sobic003G378500 Sobic003G378500 Sobic004G019700--Sobic003G378500 Sobic007G099300 Sobic007G099300 Sobic004G019700--Sobic007G099300 Sobic010G178700 Sobic010G178700 Sobic004G019700--Sobic010G178700 Sobic001G302100 Sobic001G302100 Sobic004G019700--Sobic001G302100 Sobic004G125600 Sobic004G125600 Sobic004G019700--Sobic004G125600 Sobic006G142700 Sobic006G142700 Sobic004G019700--Sobic006G142700 Sobic001G124500--Sobic007G099300 Sobic001G124500--Sobic008G013700 Sobic001G124500--Sobic004G019700 Sobic001G124500--Sobic006G142700 Sobic001G124500--Sobic004G192001 Sobic001G124500--Sobic004G125600 Sobic004G125701 Sobic004G125701 Sobic001G124500--Sobic004G125701 Sobic001G124500--Sobic010G178700 Sobic004G342600 Sobic004G342600 Sobic001G124500--Sobic004G342600 Sobic004G192001--Sobic007G099300 Sobic004G260700 Sobic004G260700 Sobic004G192001--Sobic004G260700 Sobic004G192001--Sobic001G124500 Sobic004G192001--Sobic004G019700 Sobic004G192001--Sobic008G013700 Sobic004G192001--Sobic010G178700 Sobic010G111900 Sobic010G111900 Sobic004G192001--Sobic010G111900 Sobic004G192001--Sobic004G125600 Sobic003G439200 Sobic003G439200 Sobic004G192001--Sobic003G439200 Sobic008G013700--Sobic001G124500 Sobic008G013700--Sobic004G019700 Sobic008G013700--Sobic004G192001 Sobic008G013700--Sobic004G125701 Sobic008G013700--Sobic007G099300 Sobic008G013700--Sobic004G125600 Sobic008G013700--Sobic010G178700 Sobic004G224400 Sobic004G224400 Sobic008G013700--Sobic004G224400 Sobic009G038800 Sobic009G038800 Sobic008G013700--Sobic009G038800 Sobic003G378500--Sobic004G019700 Sobic008G064900 Sobic008G064900 Sobic003G378500--Sobic008G064900 Sobic008G173700 Sobic008G173700 Sobic003G378500--Sobic008G173700 Sobic008G019466 Sobic008G019466 Sobic003G378500--Sobic008G019466 Sobic003G378500--Sobic001G124500 Sobic004G177400 Sobic004G177400 Sobic003G378500--Sobic004G177400 Sobic003G378500--Sobic008G013700 Sobic003G378500--Sobic004G192001 Sobic002G188000 Sobic002G188000 Sobic003G378500--Sobic002G188000 Sobic007G099300--Sobic001G124500 Sobic007G099300--Sobic004G192001 Sobic007G099300--Sobic006G142700 Sobic007G099300--Sobic004G125701 Sobic007G099300--Sobic004G260700 Sobic007G099300--Sobic008G013700 Sobic007G099300--Sobic004G125600 Sobic007G099300--Sobic004G019700 Sobic010G150000 Sobic010G150000 Sobic007G099300--Sobic010G150000 Sobic010G178700--Sobic001G124500 Sobic010G178700--Sobic008G013700 Sobic010G178700--Sobic004G019700 Sobic010G178700--Sobic004G125600 Sobic010G178700--Sobic004G192001 Sobic010G178700--Sobic007G099300 Sobic001G520200 Sobic001G520200 Sobic010G178700--Sobic001G520200 Sobic010G178700--Sobic009G038800 Sobic010G178700--Sobic004G125701 Sobic003G249300 Sobic003G249300 Sobic001G302100--Sobic003G249300 Sobic002G341600 Sobic002G341600 Sobic001G302100--Sobic002G341600 Sobic001G302100--Sobic004G125701 Sobic001G540250 Sobic001G540250 Sobic001G302100--Sobic001G540250 Sobic001G302100--Sobic004G125600 Sobic001G217800 Sobic001G217800 Sobic001G302100--Sobic001G217800 Sobic001G302100--Sobic004G019700 Sobic001G302100--Sobic007G099300 Sobic001G302100--Sobic001G124500 Sobic004G125600--Sobic004G125701 Sobic002G275400 Sobic002G275400 Sobic004G125600--Sobic002G275400 Sobic004G125600--Sobic001G124500 Sobic004G125600--Sobic007G099300 Sobic004G125600--Sobic008G013700 Sobic004G125600--Sobic001G302100 Sobic004G125600--Sobic010G178700 Sobic004G125600--Sobic004G019700 Sobic004G125600--Sobic003G249300 Sobic006G142700--Sobic001G124500 Sobic006G142700--Sobic007G099300 Sobic006G152900 Sobic006G152900 Sobic006G142700--Sobic006G152900 Sobic009G250000 Sobic009G250000 Sobic006G142700--Sobic009G250000 Sobic002G038200 Sobic002G038200 Sobic006G142700--Sobic002G038200 Sobic010G219700 Sobic010G219700 Sobic006G142700--Sobic010G219700 Sobic003G194900 Sobic003G194900 Sobic006G142700--Sobic003G194900 Sobic006G142700--Sobic010G150000 Sobic006G142700--Sobic004G019700
Octagon: transcription factors


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