Gene annotation
Transcriptome id Sobic.010G178700.2
Synonym AT5MAT, Sb10g023030
Functional annotation transferase family protein, putative, expressed
UniProt A0A1W0VTR9
Pfam PF02458
Panther DB PTHR31625 PTHR31625:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G39080 : HXXXD-type acyl-transferase family protein
RAP-DB (Rice) LOC_Os06g05320.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7D02G090900
Populus -


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cDNA sequences
Sobic.010G178700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G124500 elongation of fatty acids protein 2, putative, expressed -
2 Sobic.008G013700 - -
3 Sobic.004G019700 expressed protein -
4 Sobic.004G125600 - -
5 Sobic.004G192001 - -
6 Sobic.007G099300 - -
7 Sobic.001G520200 glycosylphosphatidylinositol anchor biosynthesis protein 11, putative, expressed K05287: GPI ethanolamine phosphate transferase 2/3 subunit F
8 Sobic.009G038800 SLD5 - Putative GINS complex subunit, expressed K10735: GINS4, GINS complex subunit 4
9 Sobic.004G125701 - -
10 Sobic.003G439200 RNA polymerase IV largest subunit, putative, expressed K16251: DNA-directed RNA polymerase V subunit 1
11 Sobic.009G250000 helix-loop-helix DNA-binding protein, putative, expressed -
12 Sobic.006G181150 - -
13 Sobic.010G111900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@flavin-containing monooxygenase family protein, putative, expressed -
14 Sobic.006G142700 expressed protein -
15 Sobic.003G378500 expressed protein -
16 Sobic.004G260700 - -
17 Sobic.005G169900 CDK5RAP1, putative, expressed -
18 Sobic.005G077532 - -
19 Sobic.010G150000 - -
20 Sobic.007G016300 - -


Gene co-expression network
sample Sobic010G178700 Sobic010G178700 Sobic001G124500 Sobic001G124500 Sobic010G178700--Sobic001G124500 Sobic008G013700 Sobic008G013700 Sobic010G178700--Sobic008G013700 Sobic004G019700 Sobic004G019700 Sobic010G178700--Sobic004G019700 Sobic004G125600 Sobic004G125600 Sobic010G178700--Sobic004G125600 Sobic004G192001 Sobic004G192001 Sobic010G178700--Sobic004G192001 Sobic007G099300 Sobic007G099300 Sobic010G178700--Sobic007G099300 Sobic001G520200 Sobic001G520200 Sobic010G178700--Sobic001G520200 Sobic009G038800 Sobic009G038800 Sobic010G178700--Sobic009G038800 Sobic004G125701 Sobic004G125701 Sobic010G178700--Sobic004G125701 Sobic001G124500--Sobic007G099300 Sobic001G124500--Sobic008G013700 Sobic001G124500--Sobic004G019700 Sobic006G142700 Sobic006G142700 Sobic001G124500--Sobic006G142700 Sobic001G124500--Sobic004G192001 Sobic001G124500--Sobic004G125600 Sobic001G124500--Sobic004G125701 Sobic001G124500--Sobic010G178700 Sobic004G342600 Sobic004G342600 Sobic001G124500--Sobic004G342600 Sobic008G013700--Sobic001G124500 Sobic008G013700--Sobic004G019700 Sobic008G013700--Sobic004G192001 Sobic008G013700--Sobic004G125701 Sobic008G013700--Sobic007G099300 Sobic008G013700--Sobic004G125600 Sobic008G013700--Sobic010G178700 Sobic004G224400 Sobic004G224400 Sobic008G013700--Sobic004G224400 Sobic008G013700--Sobic009G038800 Sobic004G019700--Sobic001G124500 Sobic004G019700--Sobic004G192001 Sobic004G019700--Sobic008G013700 Sobic003G378500 Sobic003G378500 Sobic004G019700--Sobic003G378500 Sobic004G019700--Sobic007G099300 Sobic004G019700--Sobic010G178700 Sobic001G302100 Sobic001G302100 Sobic004G019700--Sobic001G302100 Sobic004G019700--Sobic004G125600 Sobic004G019700--Sobic006G142700 Sobic004G125600--Sobic004G125701 Sobic002G275400 Sobic002G275400 Sobic004G125600--Sobic002G275400 Sobic004G125600--Sobic001G124500 Sobic004G125600--Sobic007G099300 Sobic004G125600--Sobic008G013700 Sobic004G125600--Sobic001G302100 Sobic004G125600--Sobic010G178700 Sobic004G125600--Sobic004G019700 Sobic003G249300 Sobic003G249300 Sobic004G125600--Sobic003G249300 Sobic004G192001--Sobic007G099300 Sobic004G260700 Sobic004G260700 Sobic004G192001--Sobic004G260700 Sobic004G192001--Sobic001G124500 Sobic004G192001--Sobic004G019700 Sobic004G192001--Sobic008G013700 Sobic004G192001--Sobic010G178700 Sobic010G111900 Sobic010G111900 Sobic004G192001--Sobic010G111900 Sobic004G192001--Sobic004G125600 Sobic003G439200 Sobic003G439200 Sobic004G192001--Sobic003G439200 Sobic007G099300--Sobic001G124500 Sobic007G099300--Sobic004G192001 Sobic007G099300--Sobic006G142700 Sobic007G099300--Sobic004G125701 Sobic007G099300--Sobic004G260700 Sobic007G099300--Sobic008G013700 Sobic007G099300--Sobic004G125600 Sobic007G099300--Sobic004G019700 Sobic010G150000 Sobic010G150000 Sobic007G099300--Sobic010G150000 Sobic009G250000 Sobic009G250000 Sobic001G520200--Sobic009G250000 Sobic002G038200 Sobic002G038200 Sobic001G520200--Sobic002G038200 Sobic001G520200--Sobic010G150000 Sobic001G520200--Sobic001G124500 Sobic001G520200--Sobic010G178700 Sobic001G520200--Sobic006G142700 Sobic001G520200--Sobic009G038800 Sobic001G520200--Sobic008G013700 Sobic001G520200--Sobic004G125701 Sobic009G038800--Sobic008G013700 Sobic009G038800--Sobic001G124500 Sobic009G038800--Sobic009G250000 Sobic009G038800--Sobic002G038200 Sobic009G038800--Sobic001G520200 Sobic009G038800--Sobic010G178700 Sobic009G038800--Sobic004G019700 Sobic005G001600 Sobic005G001600 Sobic009G038800--Sobic005G001600 Sobic008G173700 Sobic008G173700 Sobic009G038800--Sobic008G173700 Sobic004G125701--Sobic004G125600 Sobic004G125701--Sobic002G275400 Sobic004G125701--Sobic007G099300 Sobic004G125701--Sobic001G124500 Sobic001G540250 Sobic001G540250 Sobic004G125701--Sobic001G540250 Sobic004G125701--Sobic008G013700 Sobic004G125701--Sobic001G302100 Sobic004G125701--Sobic003G249300 Sobic002G341600 Sobic002G341600 Sobic004G125701--Sobic002G341600
Octagon: transcription factors


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