Gene annotation
Transcriptome id Sobic.004G036400.1
Synonym CAX5, ATCAX5, Sb04g003135
Functional annotation Ca exchanger 2 (PubMedID : 22196357)
sodium/calcium exchanger protein, putative, expressed
UniProt C5XUJ0
Pfam PF01699
Panther DB PTHR31503 PTHR31503:SF16
NCBI CDD KOG1397; Ca2+/H+ antiporter VCX1 and related proteins
KEGG Orthology K07300; chaA, Ca2+:H+ antiporter
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G55730 : cation exchanger 5
RAP-DB (Rice) LOC_Os03g27960.1 : sodium/calcium exchanger protein, putative, expressed
MaizeGDB (Corn) Zm00025a018937
Brachypodium PNT65855
Barley -
Wheat TraesCS6A02G108700 , TraesCS6A02G108700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G188100 expressed protein K15191: La-related protein 7
2 Sobic.001G409000 - -
3 Sobic.007G001800 harpin-induced protein 1 domain containing protein, expressed -
4 Sobic.003G445600 KIP1, putative, expressed -
5 Sobic.009G016900 expressed protein -
6 Sobic.005G204500 uncharacterized protein At4g06744 precursor, putative, expressed -
7 Sobic.004G217200 Lung seven transmembrane receptor domain containing protein, putative, expressed -
8 Sobic.006G164800 eukaryotic translation initiation factor 4G, putative, expressed K03260: translation initiation factor 4G
9 Sobic.001G269800 - -
10 Sobic.007G167000 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
11 Sobic.003G394801 - -
12 Sobic.009G091300 - -
13 Sobic.004G062300 fasciclin-like arabinogalactan precursor protein, putative, expressed -
14 Sobic.001G306200 expansin precursor, putative, expressed -
15 Sobic.005G142400 plant protein of unknown function domain containing protein, expressed -
16 Sobic.008G154300 flavin monooxygenase, putative, expressed -
17 Sobic.004G293300 zinc-binding protein, putative, expressed -
18 Sobic.009G169500 DEFL4 - Defensin and Defensin-like DEFL family, expressed -
19 Sobic.010G091800 expressed protein -
20 Sobic.002G053800 glycosyl hydrolase family 10 protein, putative, expressed -


Gene co-expression network
sample Sobic004G036400 Sobic004G036400 Sobic001G188100 Sobic001G188100 Sobic004G036400--Sobic001G188100 Sobic001G409000 Sobic001G409000 Sobic004G036400--Sobic001G409000 Sobic007G001800 Sobic007G001800 Sobic004G036400--Sobic007G001800 Sobic003G445600 Sobic003G445600 Sobic004G036400--Sobic003G445600 Sobic009G016900 Sobic009G016900 Sobic004G036400--Sobic009G016900 Sobic005G204500 Sobic005G204500 Sobic004G036400--Sobic005G204500 Sobic004G217200 Sobic004G217200 Sobic004G036400--Sobic004G217200 Sobic006G164800 Sobic006G164800 Sobic004G036400--Sobic006G164800 Sobic001G269800 Sobic001G269800 Sobic004G036400--Sobic001G269800 Sobic001G188100--Sobic004G036400 Sobic002G049700 Sobic002G049700 Sobic001G188100--Sobic002G049700 Sobic001G188100--Sobic001G409000 Sobic001G188100--Sobic006G164800 Sobic001G188100--Sobic007G001800 Sobic009G060000 Sobic009G060000 Sobic001G188100--Sobic009G060000 Sobic001G188100--Sobic003G445600 Sobic004G062300 Sobic004G062300 Sobic001G188100--Sobic004G062300 Sobic008G134600 Sobic008G134600 Sobic001G188100--Sobic008G134600 Sobic001G409000--Sobic007G001800 Sobic001G409000--Sobic009G016900 Sobic001G409000--Sobic004G217200 Sobic001G409000--Sobic006G164800 Sobic001G409000--Sobic004G062300 Sobic008G153700 Sobic008G153700 Sobic001G409000--Sobic008G153700 Sobic003G394801 Sobic003G394801 Sobic001G409000--Sobic003G394801 Sobic002G414150 Sobic002G414150 Sobic001G409000--Sobic002G414150 Sobic001G269600 Sobic001G269600 Sobic001G409000--Sobic001G269600 Sobic007G001800--Sobic001G409000 Sobic007G001800--Sobic004G217200 Sobic007G001800--Sobic006G164800 Sobic007G001800--Sobic009G016900 Sobic007G001800--Sobic001G269600 Sobic001G269700 Sobic001G269700 Sobic007G001800--Sobic001G269700 Sobic007G001800--Sobic003G394801 Sobic002G414300 Sobic002G414300 Sobic007G001800--Sobic002G414300 Sobic007G167000 Sobic007G167000 Sobic007G001800--Sobic007G167000 Sobic002G303500 Sobic002G303500 Sobic003G445600--Sobic002G303500 Sobic003G445600--Sobic009G016900 Sobic006G282000 Sobic006G282000 Sobic003G445600--Sobic006G282000 Sobic001G097000 Sobic001G097000 Sobic003G445600--Sobic001G097000 Sobic010G229801 Sobic010G229801 Sobic003G445600--Sobic010G229801 Sobic003G317600 Sobic003G317600 Sobic003G445600--Sobic003G317600 Sobic004G242600 Sobic004G242600 Sobic003G445600--Sobic004G242600 Sobic007G175800 Sobic007G175800 Sobic003G445600--Sobic007G175800 Sobic004G134600 Sobic004G134600 Sobic003G445600--Sobic004G134600 Sobic009G016900--Sobic004G217200 Sobic009G016900--Sobic001G409000 Sobic009G016900--Sobic007G001800 Sobic009G016900--Sobic003G394801 Sobic009G016900--Sobic005G204500 Sobic006G142200 Sobic006G142200 Sobic009G016900--Sobic006G142200 Sobic005G006300 Sobic005G006300 Sobic009G016900--Sobic005G006300 Sobic006G195000 Sobic006G195000 Sobic009G016900--Sobic006G195000 Sobic004G049300 Sobic004G049300 Sobic009G016900--Sobic004G049300 Sobic005G204500--Sobic006G142200 Sobic005G204500--Sobic005G006300 Sobic009G169500 Sobic009G169500 Sobic005G204500--Sobic009G169500 Sobic005G204500--Sobic006G195000 Sobic001G306200 Sobic001G306200 Sobic005G204500--Sobic001G306200 Sobic005G204500--Sobic003G394801 Sobic005G009500 Sobic005G009500 Sobic005G204500--Sobic005G009500 Sobic005G110120 Sobic005G110120 Sobic005G204500--Sobic005G110120 Sobic010G162700 Sobic010G162700 Sobic005G204500--Sobic010G162700 Sobic004G217200--Sobic005G006300 Sobic004G217200--Sobic002G414150 Sobic004G217200--Sobic006G142200 Sobic004G217200--Sobic003G394801 Sobic001G269400 Sobic001G269400 Sobic004G217200--Sobic001G269400 Sobic004G217200--Sobic005G009500 Sobic004G217200--Sobic005G204500 Sobic004G217200--Sobic001G269600 Sobic004G217200--Sobic001G269700 Sobic006G164800--Sobic004G062300 Sobic006G164800--Sobic007G001800 Sobic006G164800--Sobic004G217200 Sobic004G293300 Sobic004G293300 Sobic006G164800--Sobic004G293300 Sobic006G164800--Sobic001G409000 Sobic006G164800--Sobic003G394801 Sobic006G164800--Sobic007G167000 Sobic003G175600 Sobic003G175600 Sobic006G164800--Sobic003G175600 Sobic002G053800 Sobic002G053800 Sobic006G164800--Sobic002G053800 Sobic010G091800 Sobic010G091800 Sobic001G269800--Sobic010G091800 Sobic001G306400 Sobic001G306400 Sobic001G269800--Sobic001G306400 Sobic008G154300 Sobic008G154300 Sobic001G269800--Sobic008G154300 Sobic005G142400 Sobic005G142400 Sobic001G269800--Sobic005G142400 Sobic009G091300 Sobic009G091300 Sobic001G269800--Sobic009G091300 Sobic001G269800--Sobic002G053800 Sobic001G269800--Sobic004G293300 Sobic009G203900 Sobic009G203900 Sobic001G269800--Sobic009G203900 Sobic001G024900 Sobic001G024900 Sobic001G269800--Sobic001G024900
Octagon: transcription factors


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