Gene annotation
Transcriptome id Sobic.004G053400.1
Synonym SbSAUR35, SbSAUR35;small auxin up RNA, small auxin up RNA, Sb04g004530
Functional annotation "domain confirmed by Pfam database, expression not supported" (PubMedID : 20499123)
SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
OsSAUR6 - Auxin-responsive SAUR gene family member, expressed
UniProt A0A1Z5RL08
Pfam PF02519
Panther DB PTHR31374 PTHR31374:SF37
NCBI CDD -
KEGG Orthology K14488; SAUR family protein
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT1G56150 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os02g07110.1 : OsSAUR6 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a051785 , Zm00025a019058
Brachypodium -
Barley HORVU6Hr1G027640.1
Wheat TraesCS6D02G130600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G338000 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
2 Sobic.003G131800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@major facilitator superfamily antiporter, putative, expressed -
3 Sobic.009G136700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
4 Sobic.002G225000 remorin C-terminal domain containing protein, putative, expressed -
5 Sobic.008G024300 tyrosine protein kinase domain containing protein, putative, expressed -
6 Sobic.010G011200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
7 Sobic.002G110100 cytochrome P450 71E1, putative, expressed -
8 Sobic.004G057900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
9 Sobic.001G448600 GTP-binding protein, putative, expressed K03978: GTP-binding protein
10 Sobic.005G036500 AGC_PVPK_like_kin82y.1 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
11 Sobic.006G175700 down-regulated TF in developmental senescence(PubMedID : 27586543)@putative basic helix-loop-helix (bHLH) transcription factor(PubmedID : 24048646)@anthocyanin regulatory Lc protein, putative, expressed -
12 Sobic.001G532900 PPR repeat domain containing protein, putative, expressed -
13 Sobic.003G007800 phosphorylase domain containing protein, putative, expressed -
14 Sobic.005G190800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
15 Sobic.009G210100 EMB1796, putative, expressed -
16 Sobic.004G038300 cycloartenol synthase, putative, expressed -
17 Sobic.001G332966 - -
18 Sobic.004G116300 expressed protein -
19 Sobic.008G136500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.007G195300 thioesterase family protein, putative, expressed K17362: acyl-coenzyme A thioesterase 13


Gene co-expression network
sample Sobic004G053400 Sobic004G053400 Sobic001G338000 Sobic001G338000 Sobic004G053400--Sobic001G338000 Sobic003G131800 Sobic003G131800 Sobic004G053400--Sobic003G131800 Sobic009G136700 Sobic009G136700 Sobic004G053400--Sobic009G136700 Sobic002G225000 Sobic002G225000 Sobic004G053400--Sobic002G225000 Sobic008G024300 Sobic008G024300 Sobic004G053400--Sobic008G024300 Sobic010G011200 Sobic010G011200 Sobic004G053400--Sobic010G011200 Sobic002G110100 Sobic002G110100 Sobic004G053400--Sobic002G110100 Sobic004G057900 Sobic004G057900 Sobic004G053400--Sobic004G057900 Sobic001G448600 Sobic001G448600 Sobic004G053400--Sobic001G448600 Sobic001G332966 Sobic001G332966 Sobic001G338000--Sobic001G332966 Sobic002G278800 Sobic002G278800 Sobic001G338000--Sobic002G278800 Sobic006G175700 Sobic006G175700 Sobic001G338000--Sobic006G175700 Sobic003G006866 Sobic003G006866 Sobic001G338000--Sobic003G006866 Sobic003G173700 Sobic003G173700 Sobic001G338000--Sobic003G173700 Sobic002G278700 Sobic002G278700 Sobic001G338000--Sobic002G278700 Sobic005G190800 Sobic005G190800 Sobic001G338000--Sobic005G190800 Sobic001G338000--Sobic003G131800 Sobic008G030700 Sobic008G030700 Sobic001G338000--Sobic008G030700 Sobic003G131800--Sobic002G278700 Sobic003G131800--Sobic002G278800 Sobic003G131800--Sobic008G030700 Sobic003G131800--Sobic006G175700 Sobic007G195300 Sobic007G195300 Sobic003G131800--Sobic007G195300 Sobic010G012400 Sobic010G012400 Sobic003G131800--Sobic010G012400 Sobic003G131800--Sobic003G173700 Sobic001G249500 Sobic001G249500 Sobic003G131800--Sobic001G249500 Sobic009G136500 Sobic009G136500 Sobic003G131800--Sobic009G136500 Sobic009G136700--Sobic003G131800 Sobic002G075800 Sobic002G075800 Sobic009G136700--Sobic002G075800 Sobic009G136700--Sobic009G136500 Sobic009G136700--Sobic002G278800 Sobic009G136700--Sobic002G278700 Sobic009G136700--Sobic003G173700 Sobic009G136700--Sobic007G195300 Sobic009G136700--Sobic010G012400 Sobic009G136700--Sobic001G332966 Sobic009G231100 Sobic009G231100 Sobic002G225000--Sobic009G231100 Sobic003G078300 Sobic003G078300 Sobic002G225000--Sobic003G078300 Sobic002G377300 Sobic002G377300 Sobic002G225000--Sobic002G377300 Sobic001G379100 Sobic001G379100 Sobic002G225000--Sobic001G379100 Sobic010G165100 Sobic010G165100 Sobic002G225000--Sobic010G165100 Sobic003G148400 Sobic003G148400 Sobic002G225000--Sobic003G148400 Sobic003G223000 Sobic003G223000 Sobic002G225000--Sobic003G223000 Sobic002G388600 Sobic002G388600 Sobic002G225000--Sobic002G388600 Sobic002G078000 Sobic002G078000 Sobic002G225000--Sobic002G078000 Sobic004G296200 Sobic004G296200 Sobic008G024300--Sobic004G296200 Sobic008G024300--Sobic010G165100 Sobic005G036500 Sobic005G036500 Sobic008G024300--Sobic005G036500 Sobic008G024300--Sobic002G225000 Sobic002G246000 Sobic002G246000 Sobic008G024300--Sobic002G246000 Sobic006G182500 Sobic006G182500 Sobic008G024300--Sobic006G182500 Sobic003G229700 Sobic003G229700 Sobic008G024300--Sobic003G229700 Sobic002G025300 Sobic002G025300 Sobic008G024300--Sobic002G025300 Sobic003G287000 Sobic003G287000 Sobic008G024300--Sobic003G287000 Sobic005G110481 Sobic005G110481 Sobic010G011200--Sobic005G110481 Sobic007G171800 Sobic007G171800 Sobic010G011200--Sobic007G171800 Sobic010G012900 Sobic010G012900 Sobic010G011200--Sobic010G012900 Sobic001G148200 Sobic001G148200 Sobic010G011200--Sobic001G148200 Sobic002G013700 Sobic002G013700 Sobic010G011200--Sobic002G013700 Sobic009G001500 Sobic009G001500 Sobic010G011200--Sobic009G001500 Sobic001G383900 Sobic001G383900 Sobic010G011200--Sobic001G383900 Sobic009G104700 Sobic009G104700 Sobic010G011200--Sobic009G104700 Sobic009G098100 Sobic009G098100 Sobic010G011200--Sobic009G098100 Sobic002G226700 Sobic002G226700 Sobic002G110100--Sobic002G226700 Sobic010G166700 Sobic010G166700 Sobic002G110100--Sobic010G166700 Sobic002G173800 Sobic002G173800 Sobic002G110100--Sobic002G173800 Sobic002G110100--Sobic009G136700 Sobic002G110100--Sobic004G296200 Sobic005G141000 Sobic005G141000 Sobic002G110100--Sobic005G141000 Sobic004G295700 Sobic004G295700 Sobic002G110100--Sobic004G295700 Sobic002G110100--Sobic002G075800 Sobic007G050600 Sobic007G050600 Sobic002G110100--Sobic007G050600 Sobic006G167500 Sobic006G167500 Sobic004G057900--Sobic006G167500 Sobic004G057900--Sobic010G011200 Sobic004G057900--Sobic009G104700 Sobic007G108400 Sobic007G108400 Sobic004G057900--Sobic007G108400 Sobic004G057900--Sobic001G448600 Sobic004G057900--Sobic005G110481 Sobic004G116300 Sobic004G116300 Sobic004G057900--Sobic004G116300 Sobic006G021800 Sobic006G021800 Sobic004G057900--Sobic006G021800 Sobic004G011300 Sobic004G011300 Sobic004G057900--Sobic004G011300 Sobic001G375000 Sobic001G375000 Sobic001G448600--Sobic001G375000 Sobic004G255500 Sobic004G255500 Sobic001G448600--Sobic004G255500 Sobic002G140000 Sobic002G140000 Sobic001G448600--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic001G448600--Sobic001G281500 Sobic001G448600--Sobic002G013700 Sobic001G448600--Sobic009G104700 Sobic007G015300 Sobic007G015300 Sobic001G448600--Sobic007G015300 Sobic003G128400 Sobic003G128400 Sobic001G448600--Sobic003G128400 Sobic010G027200 Sobic010G027200 Sobic001G448600--Sobic010G027200
Octagon: transcription factors


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