Gene annotation
Transcriptome id Sobic.004G057900.4,Sobic.004G057900.2,Sobic.004G057900.3,Sobic.004G057900.6,Sobic.004G057900.7,Sobic.004G057900.5
Synonym CYP97B3, Sb04g004850
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
cytochrome P450, putative, expressed
UniProt A0A1Z5RLA3 , A0A1Z5RLK9
Pfam PF00067
Panther DB PTHR24291 PTHR24291:SF46
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology -
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT4G15110 : cytochrome P450, family 97, subfamily B, polypeptide 3
RAP-DB (Rice) LOC_Os02g07680.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a034784
Brachypodium PNT65990
Barley HORVU6Hr1G031650.9 , HORVU6Hr1G031650.8 , HORVU6Hr1G031650.5 , HORVU6Hr1G031650.4 , HORVU6Hr1G031650.7 , HORVU6Hr1G031650.6 , HORVU6Hr1G031650.1 , HORVU6Hr1G031650.3 , HORVU6Hr1G031650.2 , HORVU6Hr1G031650.11 , HORVU6Hr1G031650.10 , HORVU6Hr1G031650.13 , HORVU6Hr1G031650.12 , HORVU6Hr1G031650.15 , HORVU6Hr1G031650.14
Wheat TraesCS6A02G156300 , TraesCS6A02G156300 , TraesCS6B02G184500 , TraesCS6D02G146300 , TraesCS6D02G146300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G167500 armadillo/beta-catenin-like repeat family protein, expressed -
2 Sobic.010G011200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
3 Sobic.009G104700 prenyltransferase, putative, expressed K04040: chlG, chlorophyll/bacteriochlorophyll a synthase
4 Sobic.007G108400 expressed protein -
5 Sobic.001G448600 GTP-binding protein, putative, expressed K03978: GTP-binding protein
6 Sobic.005G110481 - -
7 Sobic.004G116300 expressed protein -
8 Sobic.006G021800 uncharacterized protein family UPF0016 domain containing protein, expressed -
9 Sobic.004G011300 S1 RNA binding domain containing protein, expressed -
10 Sobic.002G127800 - K07052: uncharacterized protein
11 Sobic.010G215600 prenyltransferase, putative, expressed K09833: HPT, HGGT, homogentisate phytyltransferase / homogentisate geranylgeranyltransferase
12 Sobic.003G381900 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, putative, expressed K00991: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
13 Sobic.005G117300 ABC transporter, ATP-binding protein, putative, expressed -
14 Sobic.001G148200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@antitermination NusB domain-containing protein, putative, expressed -
15 Sobic.008G015800 major facilitator superfamily antiporter, putative, expressed -
16 Sobic.001G178300 DNA-binding protein, putative, expressed -
17 Sobic.002G378000 amidase family protein, putative, expressed -
18 Sobic.003G083400 cytoskeletal protein, putative, expressed -
19 Sobic.003G444500 radical SAM enzyme, putative, expressed K06941: 23S rRNA (adenine2503-C2)-methyltransferase
20 Sobic.009G201600 conserved uncharacterized protein, putative, expressed -


Gene co-expression network
sample Sobic004G057900 Sobic004G057900 Sobic006G167500 Sobic006G167500 Sobic004G057900--Sobic006G167500 Sobic010G011200 Sobic010G011200 Sobic004G057900--Sobic010G011200 Sobic009G104700 Sobic009G104700 Sobic004G057900--Sobic009G104700 Sobic007G108400 Sobic007G108400 Sobic004G057900--Sobic007G108400 Sobic001G448600 Sobic001G448600 Sobic004G057900--Sobic001G448600 Sobic005G110481 Sobic005G110481 Sobic004G057900--Sobic005G110481 Sobic004G116300 Sobic004G116300 Sobic004G057900--Sobic004G116300 Sobic006G021800 Sobic006G021800 Sobic004G057900--Sobic006G021800 Sobic004G011300 Sobic004G011300 Sobic004G057900--Sobic004G011300 Sobic007G146400 Sobic007G146400 Sobic006G167500--Sobic007G146400 Sobic004G238200 Sobic004G238200 Sobic006G167500--Sobic004G238200 Sobic001G057700 Sobic001G057700 Sobic006G167500--Sobic001G057700 Sobic006G167500--Sobic004G011300 Sobic004G207400 Sobic004G207400 Sobic006G167500--Sobic004G207400 Sobic002G072400 Sobic002G072400 Sobic006G167500--Sobic002G072400 Sobic003G264800 Sobic003G264800 Sobic006G167500--Sobic003G264800 Sobic003G083400 Sobic003G083400 Sobic006G167500--Sobic003G083400 Sobic001G333500 Sobic001G333500 Sobic006G167500--Sobic001G333500 Sobic010G011200--Sobic005G110481 Sobic007G171800 Sobic007G171800 Sobic010G011200--Sobic007G171800 Sobic010G012900 Sobic010G012900 Sobic010G011200--Sobic010G012900 Sobic001G148200 Sobic001G148200 Sobic010G011200--Sobic001G148200 Sobic002G013700 Sobic002G013700 Sobic010G011200--Sobic002G013700 Sobic009G001500 Sobic009G001500 Sobic010G011200--Sobic009G001500 Sobic001G383900 Sobic001G383900 Sobic010G011200--Sobic001G383900 Sobic010G011200--Sobic009G104700 Sobic009G098100 Sobic009G098100 Sobic010G011200--Sobic009G098100 Sobic009G104700--Sobic005G110481 Sobic002G158800 Sobic002G158800 Sobic009G104700--Sobic002G158800 Sobic007G101300 Sobic007G101300 Sobic009G104700--Sobic007G101300 Sobic009G104700--Sobic010G011200 Sobic009G104700--Sobic002G013700 Sobic005G184300 Sobic005G184300 Sobic009G104700--Sobic005G184300 Sobic003G444500 Sobic003G444500 Sobic009G104700--Sobic003G444500 Sobic003G128400 Sobic003G128400 Sobic009G104700--Sobic003G128400 Sobic003G373300 Sobic003G373300 Sobic009G104700--Sobic003G373300 Sobic007G079400 Sobic007G079400 Sobic007G108400--Sobic007G079400 Sobic009G190600 Sobic009G190600 Sobic007G108400--Sobic009G190600 Sobic003G105900 Sobic003G105900 Sobic007G108400--Sobic003G105900 Sobic007G108400--Sobic004G238200 Sobic007G108400--Sobic001G057700 Sobic001G292000 Sobic001G292000 Sobic007G108400--Sobic001G292000 Sobic007G108400--Sobic003G264800 Sobic010G259100 Sobic010G259100 Sobic007G108400--Sobic010G259100 Sobic007G108400--Sobic002G072400 Sobic001G375000 Sobic001G375000 Sobic001G448600--Sobic001G375000 Sobic004G255500 Sobic004G255500 Sobic001G448600--Sobic004G255500 Sobic002G140000 Sobic002G140000 Sobic001G448600--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic001G448600--Sobic001G281500 Sobic001G448600--Sobic002G013700 Sobic001G448600--Sobic009G104700 Sobic007G015300 Sobic007G015300 Sobic001G448600--Sobic007G015300 Sobic001G448600--Sobic003G128400 Sobic010G027200 Sobic010G027200 Sobic001G448600--Sobic010G027200 Sobic005G110481--Sobic010G011200 Sobic005G110481--Sobic001G148200 Sobic005G110481--Sobic007G171800 Sobic009G042200 Sobic009G042200 Sobic005G110481--Sobic009G042200 Sobic005G110481--Sobic007G101300 Sobic005G110481--Sobic009G104700 Sobic007G013400 Sobic007G013400 Sobic005G110481--Sobic007G013400 Sobic005G110481--Sobic002G013700 Sobic002G251400 Sobic002G251400 Sobic005G110481--Sobic002G251400 Sobic001G424400 Sobic001G424400 Sobic004G116300--Sobic001G424400 Sobic004G116300--Sobic004G057900 Sobic002G075800 Sobic002G075800 Sobic004G116300--Sobic002G075800 Sobic003G356000 Sobic003G356000 Sobic004G116300--Sobic003G356000 Sobic009G161800 Sobic009G161800 Sobic004G116300--Sobic009G161800 Sobic003G006866 Sobic003G006866 Sobic004G116300--Sobic003G006866 Sobic008G029300 Sobic008G029300 Sobic004G116300--Sobic008G029300 Sobic002G139100 Sobic002G139100 Sobic004G116300--Sobic002G139100 Sobic007G109700 Sobic007G109700 Sobic004G116300--Sobic007G109700 Sobic006G088000 Sobic006G088000 Sobic006G021800--Sobic006G088000 Sobic001G382800 Sobic001G382800 Sobic006G021800--Sobic001G382800 Sobic008G090900 Sobic008G090900 Sobic006G021800--Sobic008G090900 Sobic006G021800--Sobic001G375000 Sobic004G214400 Sobic004G214400 Sobic006G021800--Sobic004G214400 Sobic001G433100 Sobic001G433100 Sobic006G021800--Sobic001G433100 Sobic004G018100 Sobic004G018100 Sobic006G021800--Sobic004G018100 Sobic004G249600 Sobic004G249600 Sobic006G021800--Sobic004G249600 Sobic001G293300 Sobic001G293300 Sobic006G021800--Sobic001G293300 Sobic006G106400 Sobic006G106400 Sobic004G011300--Sobic006G106400 Sobic009G148500 Sobic009G148500 Sobic004G011300--Sobic009G148500 Sobic001G495200 Sobic001G495200 Sobic004G011300--Sobic001G495200 Sobic004G336000 Sobic004G336000 Sobic004G011300--Sobic004G336000 Sobic002G181000 Sobic002G181000 Sobic004G011300--Sobic002G181000 Sobic002G043600 Sobic002G043600 Sobic004G011300--Sobic002G043600 Sobic008G039600 Sobic008G039600 Sobic004G011300--Sobic008G039600 Sobic008G073100 Sobic008G073100 Sobic004G011300--Sobic008G073100 Sobic003G301300 Sobic003G301300 Sobic004G011300--Sobic003G301300
Octagon: transcription factors


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