Gene annotation
Transcriptome id Sobic.009G201600.1
Synonym Sb09g025910
Functional annotation conserved uncharacterized protein, putative, expressed
UniProt C5Z1B5
Pfam PF01709
Panther DB PTHR12532 PTHR12532:SF0
NCBI CDD KOG2972; Uncharacterized conserved protein
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G25830 : YebC-related
RAP-DB (Rice) LOC_Os05g44350.1 : conserved uncharacterized protein, putative, expressed
MaizeGDB (Corn) Zm00025a044331
Brachypodium KQK05344
Barley -
Wheat TraesCS1D02G342200 , TraesCS1B02G352500 , TraesCS1A02G340200
Populus -


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cDNA sequences
Sobic.009G201600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G139100 lipase, putative, expressed -
2 Sobic.008G088839 - -
3 Sobic.004G057900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
4 Sobic.004G305200 PPR repeat domain containing protein, putative, expressed -
5 Sobic.004G116300 expressed protein -
6 Sobic.004G289400 mitochondrial carrier protein, putative, expressed -
7 Sobic.004G124500 transporter family protein, putative, expressed -
8 Sobic.003G356000 "Expressed in drought, salt and oxidative stress"(PubMedID : 29862293)@Up-reguralion under drought(PubMedID : 24916767)@"an enzyme responsible for the ratelimiting step in proline biosynthesis, expressed at higher levels in the stay-green line, B35"(PubMedID : 26320239)@Delta 1-pyrroline-5-carboxylate synthase 2(PubMedID : 26320239)@Up-reguralion under drought(PubMedID : 24916767)@"an enzyme responsible for the ratelimiting step in proline biosynthesis, expressed at higher levels in the stay-green line, B35"(PubMedID : 26320239)@Delta 1-pyrroline-5-carboxylate synthase 2(PubMedID : 26320239)@The γ- glutamyl kinase activity of P5CS represents the rate-limiting step in this pathway and also features feedback inhibition by proline(PubMedID : 21958707)@amino acid kinase, putative, expressed K12657: ALDH18A1, delta-1-pyrroline-5-carboxylate synthetase
9 Sobic.002G043500 aldehyde oxidase, putative, expressed K09842: abscisic-aldehyde oxidase
10 Sobic.010G003900 arginine N-methyltransferase 7, putative, expressed K11438: type III protein arginine methyltransferase
11 Sobic.002G148700 Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@Up-reguralion under heat(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@heavy metal transport/detoxification protein, putative, expressed -
12 Sobic.004G356000 expressed protein K19022: AP-5 complex subunit beta-1
13 Sobic.007G180600 UBX domain-containing protein, putative, expressed -
14 Sobic.007G203000 RNA pseudouridine synthase, putative, expressed -
15 Sobic.006G167500 armadillo/beta-catenin-like repeat family protein, expressed -
16 Sobic.003G149800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Putative splicing factor(PubMedID : 24356560)@RNA recognition motif containing protein, expressed K12890: SFRS1, ASF, splicing factor, arginine/serine-rich 1
17 Sobic.001G151700 glutamyl-tRNA, putative, expressed K02435: gatC, aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit C
18 Sobic.010G155600 DJ-1 family protein, putative, expressed K03152: protein deglycase
19 Sobic.001G125500 ethylene-insensitive protein, putative, expressed K14513: ethylene-insensitive protein 2
20 Sobic.006G147600 L-allo-threonine aldolase, putative, expressed K01620: threonine aldolase


Gene co-expression network
sample Sobic009G201600 Sobic009G201600 Sobic002G139100 Sobic002G139100 Sobic009G201600--Sobic002G139100 Sobic008G088839 Sobic008G088839 Sobic009G201600--Sobic008G088839 Sobic004G057900 Sobic004G057900 Sobic009G201600--Sobic004G057900 Sobic004G305200 Sobic004G305200 Sobic009G201600--Sobic004G305200 Sobic004G116300 Sobic004G116300 Sobic009G201600--Sobic004G116300 Sobic004G289400 Sobic004G289400 Sobic009G201600--Sobic004G289400 Sobic004G124500 Sobic004G124500 Sobic009G201600--Sobic004G124500 Sobic003G356000 Sobic003G356000 Sobic009G201600--Sobic003G356000 Sobic002G043500 Sobic002G043500 Sobic009G201600--Sobic002G043500 Sobic004G275600 Sobic004G275600 Sobic002G139100--Sobic004G275600 Sobic001G537500 Sobic001G537500 Sobic002G139100--Sobic001G537500 Sobic005G140500 Sobic005G140500 Sobic002G139100--Sobic005G140500 Sobic003G165101 Sobic003G165101 Sobic002G139100--Sobic003G165101 Sobic010G155600 Sobic010G155600 Sobic002G139100--Sobic010G155600 Sobic006G010400 Sobic006G010400 Sobic002G139100--Sobic006G010400 Sobic006G237000 Sobic006G237000 Sobic002G139100--Sobic006G237000 Sobic007G112600 Sobic007G112600 Sobic002G139100--Sobic007G112600 Sobic003G309300 Sobic003G309300 Sobic002G139100--Sobic003G309300 Sobic010G011900 Sobic010G011900 Sobic008G088839--Sobic010G011900 Sobic008G039401 Sobic008G039401 Sobic008G088839--Sobic008G039401 Sobic009G161900 Sobic009G161900 Sobic008G088839--Sobic009G161900 Sobic005G075800 Sobic005G075800 Sobic008G088839--Sobic005G075800 Sobic001G034500 Sobic001G034500 Sobic008G088839--Sobic001G034500 Sobic002G290100 Sobic002G290100 Sobic008G088839--Sobic002G290100 Sobic003G435400 Sobic003G435400 Sobic008G088839--Sobic003G435400 Sobic001G241600 Sobic001G241600 Sobic008G088839--Sobic001G241600 Sobic001G496900 Sobic001G496900 Sobic008G088839--Sobic001G496900 Sobic006G167500 Sobic006G167500 Sobic004G057900--Sobic006G167500 Sobic010G011200 Sobic010G011200 Sobic004G057900--Sobic010G011200 Sobic009G104700 Sobic009G104700 Sobic004G057900--Sobic009G104700 Sobic007G108400 Sobic007G108400 Sobic004G057900--Sobic007G108400 Sobic001G448600 Sobic001G448600 Sobic004G057900--Sobic001G448600 Sobic005G110481 Sobic005G110481 Sobic004G057900--Sobic005G110481 Sobic004G057900--Sobic004G116300 Sobic006G021800 Sobic006G021800 Sobic004G057900--Sobic006G021800 Sobic004G011300 Sobic004G011300 Sobic004G057900--Sobic004G011300 Sobic006G180700 Sobic006G180700 Sobic004G305200--Sobic006G180700 Sobic002G270800 Sobic002G270800 Sobic004G305200--Sobic002G270800 Sobic004G305200--Sobic002G043500 Sobic002G429400 Sobic002G429400 Sobic004G305200--Sobic002G429400 Sobic004G305200--Sobic004G289400 Sobic004G305200--Sobic001G034500 Sobic002G011100 Sobic002G011100 Sobic004G305200--Sobic002G011100 Sobic009G000400 Sobic009G000400 Sobic004G305200--Sobic009G000400 Sobic001G413800 Sobic001G413800 Sobic004G305200--Sobic001G413800 Sobic001G424400 Sobic001G424400 Sobic004G116300--Sobic001G424400 Sobic004G116300--Sobic004G057900 Sobic002G075800 Sobic002G075800 Sobic004G116300--Sobic002G075800 Sobic004G116300--Sobic003G356000 Sobic009G161800 Sobic009G161800 Sobic004G116300--Sobic009G161800 Sobic003G006866 Sobic003G006866 Sobic004G116300--Sobic003G006866 Sobic008G029300 Sobic008G029300 Sobic004G116300--Sobic008G029300 Sobic004G116300--Sobic002G139100 Sobic007G109700 Sobic007G109700 Sobic004G116300--Sobic007G109700 Sobic004G289400--Sobic002G429400 Sobic003G039500 Sobic003G039500 Sobic004G289400--Sobic003G039500 Sobic004G289400--Sobic001G413800 Sobic001G460500 Sobic001G460500 Sobic004G289400--Sobic001G460500 Sobic003G259600 Sobic003G259600 Sobic004G289400--Sobic003G259600 Sobic004G357400 Sobic004G357400 Sobic004G289400--Sobic004G357400 Sobic009G134900 Sobic009G134900 Sobic004G289400--Sobic009G134900 Sobic008G040700 Sobic008G040700 Sobic004G289400--Sobic008G040700 Sobic004G180500 Sobic004G180500 Sobic004G289400--Sobic004G180500 Sobic007G056600 Sobic007G056600 Sobic004G124500--Sobic007G056600 Sobic007G180600 Sobic007G180600 Sobic004G124500--Sobic007G180600 Sobic003G269800 Sobic003G269800 Sobic004G124500--Sobic003G269800 Sobic004G100200 Sobic004G100200 Sobic004G124500--Sobic004G100200 Sobic003G043800 Sobic003G043800 Sobic004G124500--Sobic003G043800 Sobic004G228800 Sobic004G228800 Sobic004G124500--Sobic004G228800 Sobic004G207900 Sobic004G207900 Sobic004G124500--Sobic004G207900 Sobic009G099200 Sobic009G099200 Sobic004G124500--Sobic009G099200 Sobic004G236200 Sobic004G236200 Sobic004G124500--Sobic004G236200 Sobic003G356000--Sobic002G075800 Sobic003G198200 Sobic003G198200 Sobic003G356000--Sobic003G198200 Sobic002G148700 Sobic002G148700 Sobic003G356000--Sobic002G148700 Sobic008G087500 Sobic008G087500 Sobic003G356000--Sobic008G087500 Sobic006G183200 Sobic006G183200 Sobic003G356000--Sobic006G183200 Sobic003G356000--Sobic008G029300 Sobic003G356000--Sobic004G116300 Sobic009G136700 Sobic009G136700 Sobic003G356000--Sobic009G136700 Sobic003G356000--Sobic004G124500 Sobic002G110300 Sobic002G110300 Sobic002G043500--Sobic002G110300 Sobic001G083800 Sobic001G083800 Sobic002G043500--Sobic001G083800 Sobic001G179900 Sobic001G179900 Sobic002G043500--Sobic001G179900 Sobic010G033700 Sobic010G033700 Sobic002G043500--Sobic010G033700 Sobic002G189700 Sobic002G189700 Sobic002G043500--Sobic002G189700 Sobic001G333900 Sobic001G333900 Sobic002G043500--Sobic001G333900 Sobic002G009900 Sobic002G009900 Sobic002G043500--Sobic002G009900 Sobic007G196900 Sobic007G196900 Sobic002G043500--Sobic007G196900 Sobic002G043500--Sobic004G305200
Octagon: transcription factors


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