Gene annotation
Transcriptome id Sobic.004G070100.1,Sobic.004G070100.3,Sobic.004G070100.4,Sobic.004G070100.2
Synonym Sb04g005890
Functional annotation exostosin family domain containing protein, expressed
UniProt C5XWZ9 , A0A1Z5RL99
Pfam PF03016
Panther DB PTHR11062 PTHR11062:SF63
NCBI CDD KOG1021; Acetylglucosaminyltransferase EXT1/exostosin 1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G38040 : Exostosin family protein
RAP-DB (Rice) LOC_Os02g09430.1 : exostosin family domain containing protein, expressed
MaizeGDB (Corn) Zm00025a034717 , Zm00025a019318
Brachypodium KQJ93731
Barley HORVU6Hr1G035600.8 , HORVU6Hr1G035600.9 , HORVU6Hr1G035600.7 , HORVU6Hr1G035600.4 , HORVU6Hr1G035600.5 , HORVU6Hr1G035600.2 , HORVU6Hr1G035600.3 , HORVU6Hr1G035600.1 , HORVU6Hr1G035600.6
Wheat TraesCS6D02G163400 , TraesCS6B02G202900 , TraesCS6A02G174300
Populus -


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cDNA sequences
Sobic.004G070100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G354500 methyltransferase, putative, expressed -
2 Sobic.010G123100 transporter-related, putative, expressed -
3 Sobic.004G353300 growth regulator related protein, putative, expressed -
4 Sobic.008G047500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.007G096800 UAA transporter family domain containing protein, expressed K15272: solute carrier family 35 (UDP-sugar transporter), member A1/2/3
6 Sobic.003G359400 PPR repeat containing protein, expressed -
7 Sobic.003G204100 expressed protein -
8 Sobic.010G038200 CDT1A - Putative DNA replication initiation protein, expressed K10727: chromatin licensing and DNA replication factor 1
9 Sobic.004G000400 OsPDIL1-4 protein disulfide isomerase PDIL1-4, expressed K09580: PDIA1, protein disulfide-isomerase A1
10 Sobic.001G534466 - -
11 Sobic.001G433600 - -
12 Sobic.010G143600 ATP-binding region, ATPase-like domain containing protein, expressed -
13 Sobic.008G171500 PPR repeat containing protein, expressed -
14 Sobic.002G173400 expressed protein -
15 Sobic.004G215600 - K15271: HFM1, ATP-dependent DNA helicase HFM1/MER3
16 Sobic.004G298600 histone-lysine N-methyltransferase, putative, expressed K11420: [histone H3]-lysine9 N-trimethyltransferase EHMT
17 Sobic.002G308000 powdery mildew resistant protein 5, putative, expressed -
18 Sobic.006G095000 PPR repeat domain containing protein, putative, expressed -
19 Sobic.001G117900 CAMK_KIN1/SNF1/Nim1_like.18 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K07359: calcium/calmodulin-dependent protein kinase kinase 2
20 Sobic.002G390800 kinesin motor domain containing protein, putative, expressed K10400: kinesin family member 15


Gene co-expression network
sample Sobic004G070100 Sobic004G070100 Sobic003G354500 Sobic003G354500 Sobic004G070100--Sobic003G354500 Sobic010G123100 Sobic010G123100 Sobic004G070100--Sobic010G123100 Sobic004G353300 Sobic004G353300 Sobic004G070100--Sobic004G353300 Sobic008G047500 Sobic008G047500 Sobic004G070100--Sobic008G047500 Sobic007G096800 Sobic007G096800 Sobic004G070100--Sobic007G096800 Sobic003G359400 Sobic003G359400 Sobic004G070100--Sobic003G359400 Sobic003G204100 Sobic003G204100 Sobic004G070100--Sobic003G204100 Sobic010G038200 Sobic010G038200 Sobic004G070100--Sobic010G038200 Sobic004G000400 Sobic004G000400 Sobic004G070100--Sobic004G000400 Sobic002G308000 Sobic002G308000 Sobic003G354500--Sobic002G308000 Sobic002G271400 Sobic002G271400 Sobic003G354500--Sobic002G271400 Sobic004G306100 Sobic004G306100 Sobic003G354500--Sobic004G306100 Sobic003G354500--Sobic010G038200 Sobic001G433600 Sobic001G433600 Sobic003G354500--Sobic001G433600 Sobic006G127200 Sobic006G127200 Sobic003G354500--Sobic006G127200 Sobic010G257500 Sobic010G257500 Sobic003G354500--Sobic010G257500 Sobic003G354500--Sobic004G070100 Sobic008G004900 Sobic008G004900 Sobic003G354500--Sobic008G004900 Sobic010G123100--Sobic004G353300 Sobic004G298600 Sobic004G298600 Sobic010G123100--Sobic004G298600 Sobic010G274800 Sobic010G274800 Sobic010G123100--Sobic010G274800 Sobic008G095900 Sobic008G095900 Sobic010G123100--Sobic008G095900 Sobic001G308500 Sobic001G308500 Sobic010G123100--Sobic001G308500 Sobic001G385300 Sobic001G385300 Sobic010G123100--Sobic001G385300 Sobic008G085950 Sobic008G085950 Sobic010G123100--Sobic008G085950 Sobic007G105700 Sobic007G105700 Sobic010G123100--Sobic007G105700 Sobic006G265800 Sobic006G265800 Sobic010G123100--Sobic006G265800 Sobic004G353300--Sobic001G433600 Sobic007G189100 Sobic007G189100 Sobic004G353300--Sobic007G189100 Sobic004G353300--Sobic007G105700 Sobic002G392400 Sobic002G392400 Sobic004G353300--Sobic002G392400 Sobic004G353300--Sobic010G123100 Sobic004G353300--Sobic002G308000 Sobic005G067966 Sobic005G067966 Sobic004G353300--Sobic005G067966 Sobic004G353300--Sobic001G308500 Sobic004G353300--Sobic008G085950 Sobic008G047500--Sobic008G085950 Sobic008G047500--Sobic003G204100 Sobic003G194800 Sobic003G194800 Sobic008G047500--Sobic003G194800 Sobic007G102000 Sobic007G102000 Sobic008G047500--Sobic007G102000 Sobic002G390800 Sobic002G390800 Sobic008G047500--Sobic002G390800 Sobic002G173400 Sobic002G173400 Sobic008G047500--Sobic002G173400 Sobic008G047500--Sobic004G298600 Sobic008G047500--Sobic007G105700 Sobic010G009700 Sobic010G009700 Sobic008G047500--Sobic010G009700 Sobic007G096800--Sobic004G070100 Sobic007G096800--Sobic003G354500 Sobic010G030000 Sobic010G030000 Sobic007G096800--Sobic010G030000 Sobic002G123600 Sobic002G123600 Sobic007G096800--Sobic002G123600 Sobic007G096800--Sobic010G038200 Sobic001G154300 Sobic001G154300 Sobic007G096800--Sobic001G154300 Sobic003G050700 Sobic003G050700 Sobic007G096800--Sobic003G050700 Sobic007G221700 Sobic007G221700 Sobic007G096800--Sobic007G221700 Sobic008G022500 Sobic008G022500 Sobic007G096800--Sobic008G022500 Sobic003G067201 Sobic003G067201 Sobic003G359400--Sobic003G067201 Sobic001G033600 Sobic001G033600 Sobic003G359400--Sobic001G033600 Sobic009G042000 Sobic009G042000 Sobic003G359400--Sobic009G042000 Sobic005G123400 Sobic005G123400 Sobic003G359400--Sobic005G123400 Sobic003G396800 Sobic003G396800 Sobic003G359400--Sobic003G396800 Sobic003G359400--Sobic004G070100 Sobic010G190900 Sobic010G190900 Sobic003G359400--Sobic010G190900 Sobic006G191200 Sobic006G191200 Sobic003G359400--Sobic006G191200 Sobic003G393200 Sobic003G393200 Sobic003G359400--Sobic003G393200 Sobic003G204100--Sobic008G047500 Sobic003G204100--Sobic003G194800 Sobic003G045450 Sobic003G045450 Sobic003G204100--Sobic003G045450 Sobic003G204100--Sobic004G298600 Sobic003G204100--Sobic008G085950 Sobic003G204100--Sobic002G173400 Sobic010G143600 Sobic010G143600 Sobic003G204100--Sobic010G143600 Sobic001G117900 Sobic001G117900 Sobic003G204100--Sobic001G117900 Sobic003G204100--Sobic007G102000 Sobic009G136000 Sobic009G136000 Sobic010G038200--Sobic009G136000 Sobic010G038200--Sobic010G030000 Sobic010G038200--Sobic010G009700 Sobic008G131900 Sobic008G131900 Sobic010G038200--Sobic008G131900 Sobic001G248400 Sobic001G248400 Sobic010G038200--Sobic001G248400 Sobic005G060100 Sobic005G060100 Sobic010G038200--Sobic005G060100 Sobic009G214500 Sobic009G214500 Sobic010G038200--Sobic009G214500 Sobic003G216600 Sobic003G216600 Sobic010G038200--Sobic003G216600 Sobic002G052800 Sobic002G052800 Sobic010G038200--Sobic002G052800 Sobic006G106600 Sobic006G106600 Sobic004G000400--Sobic006G106600 Sobic004G000400--Sobic002G173400 Sobic007G186400 Sobic007G186400 Sobic004G000400--Sobic007G186400 Sobic009G120400 Sobic009G120400 Sobic004G000400--Sobic009G120400 Sobic004G350200 Sobic004G350200 Sobic004G000400--Sobic004G350200 Sobic004G000400--Sobic002G271400 Sobic004G215600 Sobic004G215600 Sobic004G000400--Sobic004G215600 Sobic004G000400--Sobic002G123600 Sobic004G000400--Sobic010G257500
Octagon: transcription factors


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