Gene annotation
Transcriptome id Sobic.004G105901.1
Synonym -
Functional annotation -
UniProt A0A1Z5RLR2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G096500 protein kinase domain containing protein, expressed -
2 Sobic.004G122100 - -
3 Sobic.007G092400 amino acid transporter, putative, expressed -
4 Sobic.002G048800 expressed protein -
5 Sobic.003G410300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tran- scriptional repressor JASMONATE ZIM-DOMAIN(PubMedID : 25711704)@zinc-finger protein, putative, expressed -
6 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
7 Sobic.003G135800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@- -
8 Sobic.005G182701 - -
9 Sobic.007G076000 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@Cinnamyl alcohol dehydrogenase 9 CAD9 (At)(PubMedID : 27208977)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
10 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
11 Sobic.007G055600 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@terpene synthase, putative, expressed K14174: beta-farnesene/exo-alpha-bergamotene synthase
12 Sobic.009G152400 glutamine cyclotransferase precursor, putative, expressed -
13 Sobic.K044407 - -
14 Sobic.004G078600 lipoxygenase, putative, expressed K00454: lipoxygenase
15 Sobic.009G115400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.009G069901 - -
17 Sobic.001G448300 phytosulfokines precursor, putative, expressed -
18 Sobic.010G130800 Acyl activating enzyme 1 AAE1 (At)(PubMedID : 27208977)@AMP-binding enzyme, putative, expressed K00666: fatty-acyl-CoA synthase
19 Sobic.008G085350 - -
20 Sobic.010G078500 - -


Gene co-expression network
sample Sobic004G105901 Sobic004G105901 Sobic003G096500 Sobic003G096500 Sobic004G105901--Sobic003G096500 Sobic004G122100 Sobic004G122100 Sobic004G105901--Sobic004G122100 Sobic007G092400 Sobic007G092400 Sobic004G105901--Sobic007G092400 Sobic002G048800 Sobic002G048800 Sobic004G105901--Sobic002G048800 Sobic003G410300 Sobic003G410300 Sobic004G105901--Sobic003G410300 Sobic001G056400 Sobic001G056400 Sobic004G105901--Sobic001G056400 Sobic003G135800 Sobic003G135800 Sobic004G105901--Sobic003G135800 Sobic005G182701 Sobic005G182701 Sobic004G105901--Sobic005G182701 Sobic007G076000 Sobic007G076000 Sobic004G105901--Sobic007G076000 Sobic006G060800 Sobic006G060800 Sobic003G096500--Sobic006G060800 Sobic001G201800 Sobic001G201800 Sobic003G096500--Sobic001G201800 Sobic004G019400 Sobic004G019400 Sobic003G096500--Sobic004G019400 Sobic004G078600 Sobic004G078600 Sobic003G096500--Sobic004G078600 Sobic009G252100 Sobic009G252100 Sobic003G096500--Sobic009G252100 Sobic008G060300 Sobic008G060300 Sobic003G096500--Sobic008G060300 Sobic004G063200 Sobic004G063200 Sobic003G096500--Sobic004G063200 Sobic005G193600 Sobic005G193600 Sobic003G096500--Sobic005G193600 Sobic003G410900 Sobic003G410900 Sobic003G096500--Sobic003G410900 Sobic010G078500 Sobic010G078500 Sobic004G122100--Sobic010G078500 Sobic003G310200 Sobic003G310200 Sobic004G122100--Sobic003G310200 Sobic007G089300 Sobic007G089300 Sobic004G122100--Sobic007G089300 Sobic001G136300 Sobic001G136300 Sobic004G122100--Sobic001G136300 Sobic002G041800 Sobic002G041800 Sobic004G122100--Sobic002G041800 Sobic008G181801 Sobic008G181801 Sobic004G122100--Sobic008G181801 SobicK044407 SobicK044407 Sobic004G122100--SobicK044407 Sobic001G362001 Sobic001G362001 Sobic004G122100--Sobic001G362001 Sobic004G122100--Sobic005G193600 Sobic007G092400--Sobic003G410300 Sobic004G135366 Sobic004G135366 Sobic007G092400--Sobic004G135366 Sobic002G034750 Sobic002G034750 Sobic007G092400--Sobic002G034750 Sobic004G089300 Sobic004G089300 Sobic007G092400--Sobic004G089300 Sobic003G038400 Sobic003G038400 Sobic007G092400--Sobic003G038400 Sobic009G085300 Sobic009G085300 Sobic007G092400--Sobic009G085300 Sobic002G349900 Sobic002G349900 Sobic007G092400--Sobic002G349900 Sobic002G243300 Sobic002G243300 Sobic007G092400--Sobic002G243300 Sobic005G003600 Sobic005G003600 Sobic007G092400--Sobic005G003600 Sobic003G206800 Sobic003G206800 Sobic002G048800--Sobic003G206800 Sobic002G193400 Sobic002G193400 Sobic002G048800--Sobic002G193400 Sobic002G073900 Sobic002G073900 Sobic002G048800--Sobic002G073900 Sobic003G402200 Sobic003G402200 Sobic002G048800--Sobic003G402200 Sobic008G142600 Sobic008G142600 Sobic002G048800--Sobic008G142600 Sobic009G110500 Sobic009G110500 Sobic002G048800--Sobic009G110500 Sobic002G048800--Sobic003G135800 Sobic004G349300 Sobic004G349300 Sobic002G048800--Sobic004G349300 Sobic001G427700 Sobic001G427700 Sobic002G048800--Sobic001G427700 Sobic003G410300--Sobic007G092400 Sobic003G410300--Sobic009G085300 Sobic009G044700 Sobic009G044700 Sobic003G410300--Sobic009G044700 Sobic003G410300--Sobic002G034750 Sobic003G008000 Sobic003G008000 Sobic003G410300--Sobic003G008000 Sobic010G104600 Sobic010G104600 Sobic003G410300--Sobic010G104600 Sobic001G453600 Sobic001G453600 Sobic003G410300--Sobic001G453600 Sobic003G410300--Sobic002G243300 Sobic003G410300--Sobic004G135366 Sobic001G056400--Sobic005G182701 Sobic001G012000 Sobic001G012000 Sobic001G056400--Sobic001G012000 Sobic007G055600 Sobic007G055600 Sobic001G056400--Sobic007G055600 Sobic001G056400--SobicK044407 Sobic003G378301 Sobic003G378301 Sobic001G056400--Sobic003G378301 Sobic001G056400--Sobic007G076000 Sobic002G423600 Sobic002G423600 Sobic001G056400--Sobic002G423600 Sobic001G056500 Sobic001G056500 Sobic001G056400--Sobic001G056500 Sobic006G045000 Sobic006G045000 Sobic001G056400--Sobic006G045000 Sobic005G190900 Sobic005G190900 Sobic003G135800--Sobic005G190900 Sobic003G135800--Sobic004G078600 Sobic002G371900 Sobic002G371900 Sobic003G135800--Sobic002G371900 Sobic001G019300 Sobic001G019300 Sobic003G135800--Sobic001G019300 Sobic002G281000 Sobic002G281000 Sobic003G135800--Sobic002G281000 Sobic005G089000 Sobic005G089000 Sobic003G135800--Sobic005G089000 Sobic003G135800--Sobic003G096500 Sobic002G265400 Sobic002G265400 Sobic003G135800--Sobic002G265400 Sobic003G135800--Sobic004G063200 Sobic005G182701--Sobic007G055600 Sobic005G182701--Sobic007G076000 Sobic005G182701--Sobic001G056400 Sobic006G005500 Sobic006G005500 Sobic005G182701--Sobic006G005500 Sobic001G125700 Sobic001G125700 Sobic005G182701--Sobic001G125700 Sobic009G014600 Sobic009G014600 Sobic005G182701--Sobic009G014600 Sobic009G115400 Sobic009G115400 Sobic005G182701--Sobic009G115400 Sobic009G115300 Sobic009G115300 Sobic005G182701--Sobic009G115300 Sobic005G182701--Sobic001G012000 Sobic007G076000--Sobic007G055600 Sobic007G076000--Sobic005G182701 Sobic007G076000--Sobic006G005500 Sobic007G076000--Sobic001G125700 Sobic002G040400 Sobic002G040400 Sobic007G076000--Sobic002G040400 Sobic008G028600 Sobic008G028600 Sobic007G076000--Sobic008G028600 Sobic007G076000--Sobic009G014600 Sobic005G219000 Sobic005G219000 Sobic007G076000--Sobic005G219000 Sobic006G007650 Sobic006G007650 Sobic007G076000--Sobic006G007650
Octagon: transcription factors


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