Gene annotation
Transcriptome id Sobic.004G125500.1
Synonym
Functional annotation -
UniProt A0A194YP77
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G022100 OsFBX212 - F-box domain containing protein, expressed -
2 Sobic.007G141380 - -
3 Sobic.003G382350 - -
4 Sobic.002G011700 expressed protein -
5 Sobic.001G247550 - -
6 Sobic.001G247550 - -
7 Sobic.001G247550 - -
8 Sobic.003G160466 - -
9 Sobic.008G048900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@citrate-binding protein precursor, putative, expressed -
10 Sobic.004G230700 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
11 Sobic.002G048900 - -
12 Sobic.002G016100 OsFBD13 - F-box and FBD domain containing protein, expressed -
13 Sobic.K044414 - -
14 Sobic.002G237900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLE6 - cellulose synthase-like family E, expressed -
15 Sobic.010G031800 expressed protein -
16 Sobic.008G091614 - -
17 Sobic.004G105700 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.007G035800 "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene and beta-bisabolene, cytoplasm"(PubMedID : 21880075)@terpene synthase, putative, expressed K15803: (-)-germacrene D synthase
19 Sobic.009G260350 - -
20 Sobic.009G012100 CHIT4 - Chitinase family protein precursor, expressed K01183: chitinase


Gene co-expression network
sample Sobic004G125500 Sobic004G125500 Sobic002G022100 Sobic002G022100 Sobic004G125500--Sobic002G022100 Sobic007G141380 Sobic007G141380 Sobic004G125500--Sobic007G141380 Sobic003G382350 Sobic003G382350 Sobic004G125500--Sobic003G382350 Sobic002G011700 Sobic002G011700 Sobic004G125500--Sobic002G011700 Sobic001G247550 Sobic001G247550 Sobic004G125500--Sobic001G247550 Sobic003G160466 Sobic003G160466 Sobic004G125500--Sobic003G160466 Sobic008G048900 Sobic008G048900 Sobic004G125500--Sobic008G048900 Sobic002G048900 Sobic002G048900 Sobic002G022100--Sobic002G048900 Sobic002G022100--Sobic007G141380 Sobic002G016100 Sobic002G016100 Sobic002G022100--Sobic002G016100 Sobic002G103100 Sobic002G103100 Sobic002G022100--Sobic002G103100 Sobic003G164950 Sobic003G164950 Sobic002G022100--Sobic003G164950 Sobic007G198400 Sobic007G198400 Sobic002G022100--Sobic007G198400 Sobic004G230700 Sobic004G230700 Sobic002G022100--Sobic004G230700 Sobic009G185100 Sobic009G185100 Sobic002G022100--Sobic009G185100 Sobic009G260350 Sobic009G260350 Sobic002G022100--Sobic009G260350 Sobic007G141380--Sobic004G230700 Sobic007G141380--Sobic007G198400 Sobic007G141380--Sobic002G022100 Sobic007G141380--Sobic009G260350 Sobic002G237900 Sobic002G237900 Sobic007G141380--Sobic002G237900 Sobic008G105366 Sobic008G105366 Sobic007G141380--Sobic008G105366 Sobic002G408100 Sobic002G408100 Sobic007G141380--Sobic002G408100 Sobic005G219300 Sobic005G219300 Sobic007G141380--Sobic005G219300 Sobic006G072601 Sobic006G072601 Sobic007G141380--Sobic006G072601 Sobic003G382350--Sobic004G125500 Sobic008G157900 Sobic008G157900 Sobic003G382350--Sobic008G157900 Sobic008G088878 Sobic008G088878 Sobic003G382350--Sobic008G088878 Sobic002G068400 Sobic002G068400 Sobic003G382350--Sobic002G068400 Sobic010G027700 Sobic010G027700 Sobic003G382350--Sobic010G027700 Sobic004G215000 Sobic004G215000 Sobic003G382350--Sobic004G215000 Sobic006G015900 Sobic006G015900 Sobic003G382350--Sobic006G015900 Sobic001G030900 Sobic001G030900 Sobic003G382350--Sobic001G030900 Sobic006G181600 Sobic006G181600 Sobic003G382350--Sobic006G181600 Sobic002G011700--Sobic001G247550 Sobic010G230900 Sobic010G230900 Sobic002G011700--Sobic010G230900 Sobic002G011700--Sobic008G048900 Sobic002G098200 Sobic002G098200 Sobic002G011700--Sobic002G098200 Sobic005G043600 Sobic005G043600 Sobic002G011700--Sobic005G043600 Sobic001G354400 Sobic001G354400 Sobic002G011700--Sobic001G354400 Sobic010G230800 Sobic010G230800 Sobic002G011700--Sobic010G230800 Sobic001G247550--Sobic001G247550 Sobic001G247550--Sobic008G048900 Sobic008G091614 Sobic008G091614 Sobic001G247550--Sobic008G091614 Sobic001G247550--Sobic002G011700 Sobic001G247550--Sobic005G043600 Sobic007G198500 Sobic007G198500 Sobic001G247550--Sobic007G198500 Sobic010G057200 Sobic010G057200 Sobic001G247550--Sobic010G057200 Sobic009G023501 Sobic009G023501 Sobic001G247550--Sobic009G023501 SobicK044414 SobicK044414 Sobic003G160466--SobicK044414 Sobic003G418733 Sobic003G418733 Sobic003G160466--Sobic003G418733 Sobic002G122200 Sobic002G122200 Sobic003G160466--Sobic002G122200 Sobic005G095660 Sobic005G095660 Sobic003G160466--Sobic005G095660 Sobic003G160466--Sobic002G022100 Sobic001G000300 Sobic001G000300 Sobic003G160466--Sobic001G000300 Sobic006G061900 Sobic006G061900 Sobic003G160466--Sobic006G061900 Sobic001G248200 Sobic001G248200 Sobic003G160466--Sobic001G248200 Sobic003G160466--Sobic004G125500 Sobic008G048900--Sobic001G247550 Sobic006G246600 Sobic006G246600 Sobic008G048900--Sobic006G246600 Sobic008G048900--Sobic007G198500 Sobic008G048900--Sobic005G043600 Sobic005G043900 Sobic005G043900 Sobic008G048900--Sobic005G043900 Sobic008G048900--Sobic001G354400 Sobic003G203200 Sobic003G203200 Sobic008G048900--Sobic003G203200
Octagon: transcription factors


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