Gene annotation
Transcriptome id Sobic.002G016100.1
Synonym
Functional annotation OsFBD13 - F-box and FBD domain containing protein, expressed
UniProt A0A1B6Q8P6
Pfam PF08387
Panther DB PTHR32212 PTHR32212:SF61
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g02760.1 : OsFBD13 - F-box and FBD domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G022100 OsFBX212 - F-box domain containing protein, expressed -
2 Sobic.002G103100 - -
3 Sobic.002G048900 - -
4 Sobic.009G260350 - -
5 Sobic.003G164950 - -
6 Sobic.001G236700 programmed cell death protein 2, putative, expressed -
7 Sobic.007G198400 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
8 Sobic.009G185100 seven in absentia protein family domain containing protein, expressed -
9 Sobic.007G141380 - -
10 Sobic.002G408100 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
11 Sobic.002G237900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLE6 - cellulose synthase-like family E, expressed -
12 Sobic.009G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
13 Sobic.008G105366 - -
14 Sobic.008G089800 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
15 Sobic.007G198500 BTB/POZ domain containing protein, expressed K10523: speckle-type POZ protein
16 Sobic.004G230700 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
17 Sobic.007G100350 - -
18 Sobic.010G157300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
19 Sobic.004G253700 - -
20 Sobic.002G017500 expressed protein -


Gene co-expression network
sample Sobic002G016100 Sobic002G016100 Sobic002G022100 Sobic002G022100 Sobic002G016100--Sobic002G022100 Sobic002G103100 Sobic002G103100 Sobic002G016100--Sobic002G103100 Sobic002G048900 Sobic002G048900 Sobic002G016100--Sobic002G048900 Sobic009G260350 Sobic009G260350 Sobic002G016100--Sobic009G260350 Sobic003G164950 Sobic003G164950 Sobic002G016100--Sobic003G164950 Sobic001G236700 Sobic001G236700 Sobic002G016100--Sobic001G236700 Sobic007G198400 Sobic007G198400 Sobic002G016100--Sobic007G198400 Sobic009G185100 Sobic009G185100 Sobic002G016100--Sobic009G185100 Sobic007G141380 Sobic007G141380 Sobic002G016100--Sobic007G141380 Sobic002G022100--Sobic002G048900 Sobic002G022100--Sobic007G141380 Sobic002G022100--Sobic002G016100 Sobic002G022100--Sobic002G103100 Sobic002G022100--Sobic003G164950 Sobic002G022100--Sobic007G198400 Sobic004G230700 Sobic004G230700 Sobic002G022100--Sobic004G230700 Sobic002G022100--Sobic009G185100 Sobic002G022100--Sobic009G260350 Sobic002G103100--Sobic003G164950 Sobic008G089800 Sobic008G089800 Sobic002G103100--Sobic008G089800 Sobic002G103100--Sobic007G198400 Sobic003G418733 Sobic003G418733 Sobic002G103100--Sobic003G418733 Sobic002G103100--Sobic002G022100 Sobic004G188000 Sobic004G188000 Sobic002G103100--Sobic004G188000 Sobic002G118101 Sobic002G118101 Sobic002G103100--Sobic002G118101 Sobic007G202300 Sobic007G202300 Sobic002G103100--Sobic007G202300 Sobic002G408100 Sobic002G408100 Sobic002G103100--Sobic002G408100 Sobic002G048900--Sobic002G022100 Sobic002G048900--Sobic002G016100 Sobic002G048900--Sobic007G141380 Sobic004G133900 Sobic004G133900 Sobic002G048900--Sobic004G133900 Sobic007G035800 Sobic007G035800 Sobic002G048900--Sobic007G035800 Sobic002G048900--Sobic002G103100 Sobic002G048900--Sobic007G198400 Sobic007G198500 Sobic007G198500 Sobic002G048900--Sobic007G198500 Sobic002G048900--Sobic002G408100 Sobic008G105366 Sobic008G105366 Sobic009G260350--Sobic008G105366 Sobic009G260350--Sobic004G230700 Sobic010G057666 Sobic010G057666 Sobic009G260350--Sobic010G057666 Sobic009G260350--Sobic007G141380 Sobic010G033100 Sobic010G033100 Sobic009G260350--Sobic010G033100 Sobic009G260350--Sobic007G198400 Sobic004G038800 Sobic004G038800 Sobic009G260350--Sobic004G038800 Sobic005G007000 Sobic005G007000 Sobic009G260350--Sobic005G007000 Sobic006G072601 Sobic006G072601 Sobic009G260350--Sobic006G072601 Sobic003G164950--Sobic002G103100 Sobic003G164950--Sobic008G089800 Sobic006G056800 Sobic006G056800 Sobic003G164950--Sobic006G056800 Sobic003G164950--Sobic004G188000 Sobic003G164950--Sobic002G022100 Sobic001G284475 Sobic001G284475 Sobic003G164950--Sobic001G284475 Sobic003G164950--Sobic003G418733 Sobic006G061900 Sobic006G061900 Sobic003G164950--Sobic006G061900 Sobic003G164950--Sobic002G118101 Sobic004G070500 Sobic004G070500 Sobic001G236700--Sobic004G070500 Sobic004G034600 Sobic004G034600 Sobic001G236700--Sobic004G034600 Sobic001G236700--Sobic008G089800 Sobic010G057633 Sobic010G057633 Sobic001G236700--Sobic010G057633 Sobic007G010700 Sobic007G010700 Sobic001G236700--Sobic007G010700 Sobic001G333300 Sobic001G333300 Sobic001G236700--Sobic001G333300 Sobic002G249300 Sobic002G249300 Sobic001G236700--Sobic002G249300 Sobic009G101800 Sobic009G101800 Sobic001G236700--Sobic009G101800 Sobic001G236700--Sobic008G105366 Sobic007G198400--Sobic007G141380 Sobic001G227900 Sobic001G227900 Sobic007G198400--Sobic001G227900 Sobic007G198400--Sobic004G230700 Sobic007G198400--Sobic006G072601 Sobic007G198400--Sobic004G038800 Sobic007G198400--Sobic008G105366 Sobic007G198400--Sobic007G202300 Sobic002G017500 Sobic002G017500 Sobic007G198400--Sobic002G017500 Sobic003G416000 Sobic003G416000 Sobic007G198400--Sobic003G416000 Sobic009G185100--Sobic002G022100 Sobic002G022200 Sobic002G022200 Sobic009G185100--Sobic002G022200 Sobic009G185100--Sobic002G016100 Sobic009G185100--Sobic002G103100 Sobic009G185100--Sobic007G141380 Sobic009G185100--Sobic009G260350 Sobic009G185100--Sobic003G164950 Sobic001G337350 Sobic001G337350 Sobic009G185100--Sobic001G337350 Sobic005G170900 Sobic005G170900 Sobic009G185100--Sobic005G170900 Sobic007G141380--Sobic004G230700 Sobic007G141380--Sobic007G198400 Sobic007G141380--Sobic002G022100 Sobic007G141380--Sobic009G260350 Sobic002G237900 Sobic002G237900 Sobic007G141380--Sobic002G237900 Sobic007G141380--Sobic008G105366 Sobic007G141380--Sobic002G408100 Sobic005G219300 Sobic005G219300 Sobic007G141380--Sobic005G219300 Sobic007G141380--Sobic006G072601
Octagon: transcription factors


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