Gene annotation
Transcriptome id Sobic.001G236700.1
Synonym
Functional annotation programmed cell death protein 2, putative, expressed
UniProt A0A1B6QKK4
Pfam -
Panther DB PTHR12298 PTHR12298:SF26
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G02220 : zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein
RAP-DB (Rice) LOC_Os01g39650.1 : programmed cell death protein 2, putative, expressed
MaizeGDB (Corn) Zm00025a002070 , Zm00025a016068
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G070500 expressed protein -
2 Sobic.004G034600 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.008G089800 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
4 Sobic.010G057633 - K13993: HSP20 family protein
5 Sobic.007G010700 OsFBL6 - F-box domain and LRR containing protein, expressed -
6 Sobic.001G333300 circadian clock coupling factor-related, putative, expressed -
7 Sobic.002G249300 auxin efflux carrier component, putative, expressed -
8 Sobic.009G101800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide transporter PTR3-A, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
9 Sobic.008G105366 - -
10 Sobic.005G053200 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
11 Sobic.005G110300 - -
12 Sobic.001G000501 - -
13 Sobic.001G459600 expressed protein -
14 Sobic.001G517800 NIN, putative, expressed -
15 Sobic.004G261900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@diacylglycerol O-acyltransferase, putative, expressed K14457: MOGAT2, 2-acylglycerol O-acyltransferase 2
16 Sobic.006G072601 - -
17 Sobic.009G121400 - -
18 Sobic.003G416000 - -
19 Sobic.004G325100 transmembrane amino acid transporter protein, putative, expressed K15015: SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
20 Sobic.004G253700 - -


Gene co-expression network
sample Sobic001G236700 Sobic001G236700 Sobic004G070500 Sobic004G070500 Sobic001G236700--Sobic004G070500 Sobic004G034600 Sobic004G034600 Sobic001G236700--Sobic004G034600 Sobic008G089800 Sobic008G089800 Sobic001G236700--Sobic008G089800 Sobic010G057633 Sobic010G057633 Sobic001G236700--Sobic010G057633 Sobic007G010700 Sobic007G010700 Sobic001G236700--Sobic007G010700 Sobic001G333300 Sobic001G333300 Sobic001G236700--Sobic001G333300 Sobic002G249300 Sobic002G249300 Sobic001G236700--Sobic002G249300 Sobic009G101800 Sobic009G101800 Sobic001G236700--Sobic009G101800 Sobic008G105366 Sobic008G105366 Sobic001G236700--Sobic008G105366 Sobic001G375100 Sobic001G375100 Sobic004G070500--Sobic001G375100 Sobic004G070500--Sobic007G010700 Sobic003G146500 Sobic003G146500 Sobic004G070500--Sobic003G146500 Sobic004G070500--Sobic004G034600 Sobic004G325100 Sobic004G325100 Sobic004G070500--Sobic004G325100 Sobic002G124600 Sobic002G124600 Sobic004G070500--Sobic002G124600 Sobic003G247500 Sobic003G247500 Sobic004G070500--Sobic003G247500 Sobic007G193700 Sobic007G193700 Sobic004G070500--Sobic007G193700 Sobic005G053200 Sobic005G053200 Sobic004G070500--Sobic005G053200 Sobic005G149700 Sobic005G149700 Sobic004G034600--Sobic005G149700 Sobic004G034600--Sobic002G249300 Sobic001G517800 Sobic001G517800 Sobic004G034600--Sobic001G517800 Sobic009G011600 Sobic009G011600 Sobic004G034600--Sobic009G011600 Sobic002G266000 Sobic002G266000 Sobic004G034600--Sobic002G266000 Sobic001G459600 Sobic001G459600 Sobic004G034600--Sobic001G459600 Sobic003G322700 Sobic003G322700 Sobic004G034600--Sobic003G322700 Sobic001G223550 Sobic001G223550 Sobic004G034600--Sobic001G223550 Sobic004G261900 Sobic004G261900 Sobic004G034600--Sobic004G261900 Sobic003G164950 Sobic003G164950 Sobic008G089800--Sobic003G164950 Sobic002G103100 Sobic002G103100 Sobic008G089800--Sobic002G103100 Sobic002G118101 Sobic002G118101 Sobic008G089800--Sobic002G118101 Sobic001G053200 Sobic001G053200 Sobic008G089800--Sobic001G053200 Sobic008G089800--Sobic001G236700 Sobic007G061100 Sobic007G061100 Sobic008G089800--Sobic007G061100 Sobic007G090403 Sobic007G090403 Sobic008G089800--Sobic007G090403 Sobic008G089800--Sobic007G010700 Sobic008G089800--Sobic005G053200 Sobic010G057633--Sobic007G010700 Sobic001G000501 Sobic001G000501 Sobic010G057633--Sobic001G000501 Sobic005G095660 Sobic005G095660 Sobic010G057633--Sobic005G095660 Sobic010G057633--Sobic001G236700 Sobic010G057633--Sobic005G053200 Sobic009G098200 Sobic009G098200 Sobic010G057633--Sobic009G098200 Sobic001G000700 Sobic001G000700 Sobic010G057633--Sobic001G000700 Sobic002G418800 Sobic002G418800 Sobic010G057633--Sobic002G418800 Sobic010G057633--Sobic001G459600 Sobic007G010700--Sobic004G070500 Sobic007G010700--Sobic005G053200 Sobic007G010700--Sobic001G000501 Sobic004G253700 Sobic004G253700 Sobic007G010700--Sobic004G253700 Sobic007G010700--Sobic004G034600 Sobic005G133600 Sobic005G133600 Sobic007G010700--Sobic005G133600 Sobic003G061200 Sobic003G061200 Sobic007G010700--Sobic003G061200 Sobic007G010700--Sobic002G249300 Sobic005G089400 Sobic005G089400 Sobic007G010700--Sobic005G089400 Sobic007G001200 Sobic007G001200 Sobic001G333300--Sobic007G001200 Sobic006G072601 Sobic006G072601 Sobic001G333300--Sobic006G072601 Sobic009G121400 Sobic009G121400 Sobic001G333300--Sobic009G121400 Sobic003G127001 Sobic003G127001 Sobic001G333300--Sobic003G127001 Sobic004G038800 Sobic004G038800 Sobic001G333300--Sobic004G038800 Sobic001G333300--Sobic007G010700 Sobic001G479100 Sobic001G479100 Sobic001G333300--Sobic001G479100 Sobic009G097200 Sobic009G097200 Sobic001G333300--Sobic009G097200 Sobic003G434900 Sobic003G434900 Sobic001G333300--Sobic003G434900 Sobic002G249300--Sobic004G034600 Sobic003G174301 Sobic003G174301 Sobic002G249300--Sobic003G174301 Sobic002G249300--Sobic001G223550 Sobic002G249300--Sobic005G149700 Sobic002G249300--Sobic009G011600 Sobic001G233300 Sobic001G233300 Sobic002G249300--Sobic001G233300 Sobic001G252000 Sobic001G252000 Sobic002G249300--Sobic001G252000 Sobic001G496100 Sobic001G496100 Sobic002G249300--Sobic001G496100 Sobic002G249300--Sobic007G010700 Sobic008G166550 Sobic008G166550 Sobic009G101800--Sobic008G166550 Sobic007G202300 Sobic007G202300 Sobic009G101800--Sobic007G202300 Sobic008G101100 Sobic008G101100 Sobic009G101800--Sobic008G101100 Sobic009G248801 Sobic009G248801 Sobic009G101800--Sobic009G248801 Sobic002G115050 Sobic002G115050 Sobic009G101800--Sobic002G115050 Sobic002G097700 Sobic002G097700 Sobic009G101800--Sobic002G097700 Sobic002G017500 Sobic002G017500 Sobic009G101800--Sobic002G017500 Sobic003G416000 Sobic003G416000 Sobic009G101800--Sobic003G416000 Sobic008G184900 Sobic008G184900 Sobic009G101800--Sobic008G184900 Sobic008G105366--Sobic005G133600 Sobic004G113000 Sobic004G113000 Sobic008G105366--Sobic004G113000 Sobic008G105366--Sobic004G253700 Sobic008G105366--Sobic006G072601 Sobic009G260350 Sobic009G260350 Sobic008G105366--Sobic009G260350 Sobic007G198400 Sobic007G198400 Sobic008G105366--Sobic007G198400 Sobic008G105366--Sobic001G459600 Sobic008G105366--Sobic008G101100 Sobic008G105366--Sobic009G121400
Octagon: transcription factors


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