Gene annotation
Transcriptome id Sobic.004G325100.1
Synonym Sb04g035500
Functional annotation transmembrane amino acid transporter protein, putative, expressed
UniProt C5XUB7
Pfam PF01490
Panther DB PTHR22950 PTHR22950:SF269
NCBI CDD KOG1303; Amino acid transporters
KEGG Orthology K15015; SLC32A, solute carrier family 32 (vesicular inhibitory amino acid transporter)
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G41190 : Transmembrane amino acid transporter family protein
RAP-DB (Rice) LOC_Os02g54730.1 : transmembrane amino acid transporter protein, putative, expressed
MaizeGDB (Corn) Zm00025a022413 , Zm00025a016853 , Zm00025a045136 , Zm00025a032974
Brachypodium KQK01076
Barley HORVU6Hr1G083720.7 , HORVU6Hr1G083720.4 , HORVU6Hr1G083720.5 , HORVU6Hr1G083720.6 , HORVU6Hr1G083720.2 , HORVU6Hr1G083720.3 , HORVU6Hr1G083720.8 , HORVU6Hr1G083720.9
Wheat TraesCS6D02G331400 , TraesCS6B02G382000 , TraesCS6A02G348300 , TraesCS6A02G348400
Populus -


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cDNA sequences
Sobic.004G325100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G070500 expressed protein -
2 Sobic.009G123900 L1P family of ribosomal proteins domain containing protein, expressed K02863: RP-L1, MRPL1, large subunit ribosomal protein L1
3 Sobic.009G248801 - -
4 Sobic.005G133600 - -
5 Sobic.004G253700 - -
6 Sobic.007G010700 OsFBL6 - F-box domain and LRR containing protein, expressed -
7 Sobic.003G146500 red chlorophyll catabolite reductase, putative, expressed K13545: RCCR, red chlorophyll catabolite reductase
8 Sobic.001G062900 peptidase, putative, expressed K01301: N-acetylated-alpha-linked acidic dipeptidase
9 Sobic.001G519900 ribonuclease protein, putative, expressed K12585: DIS3, exosome complex exonuclease DIS3/RRP44
10 Sobic.001G531500 peroxisomal biogenesis factor 11, putative, expressed -
11 Sobic.002G311200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
12 Sobic.001G375100 AAA-type ATPase family protein, putative, expressed -
13 Sobic.005G053200 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
14 Sobic.007G090403 - -
15 Sobic.004G038800 OsFBX188 - F-box domain containing protein, expressed -
16 Sobic.005G110300 - -
17 Sobic.003G238700 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.010G227800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metal transporter Nramp6, putative, expressed -
19 Sobic.003G041100 myb/SANT domain protein, putative, expressed -
20 Sobic.001G105200 - K14810: DDX56, ATP-dependent RNA helicase DDX56/DBP9


Gene co-expression network
sample Sobic004G325100 Sobic004G325100 Sobic004G070500 Sobic004G070500 Sobic004G325100--Sobic004G070500 Sobic009G123900 Sobic009G123900 Sobic004G325100--Sobic009G123900 Sobic009G248801 Sobic009G248801 Sobic004G325100--Sobic009G248801 Sobic005G133600 Sobic005G133600 Sobic004G325100--Sobic005G133600 Sobic004G253700 Sobic004G253700 Sobic004G325100--Sobic004G253700 Sobic007G010700 Sobic007G010700 Sobic004G325100--Sobic007G010700 Sobic003G146500 Sobic003G146500 Sobic004G325100--Sobic003G146500 Sobic001G062900 Sobic001G062900 Sobic004G325100--Sobic001G062900 Sobic001G519900 Sobic001G519900 Sobic004G325100--Sobic001G519900 Sobic001G375100 Sobic001G375100 Sobic004G070500--Sobic001G375100 Sobic004G070500--Sobic007G010700 Sobic004G070500--Sobic003G146500 Sobic004G034600 Sobic004G034600 Sobic004G070500--Sobic004G034600 Sobic004G070500--Sobic004G325100 Sobic002G124600 Sobic002G124600 Sobic004G070500--Sobic002G124600 Sobic003G247500 Sobic003G247500 Sobic004G070500--Sobic003G247500 Sobic007G193700 Sobic007G193700 Sobic004G070500--Sobic007G193700 Sobic005G053200 Sobic005G053200 Sobic004G070500--Sobic005G053200 Sobic002G118200 Sobic002G118200 Sobic009G123900--Sobic002G118200 Sobic005G068700 Sobic005G068700 Sobic009G123900--Sobic005G068700 Sobic002G056500 Sobic002G056500 Sobic009G123900--Sobic002G056500 Sobic003G036200 Sobic003G036200 Sobic009G123900--Sobic003G036200 Sobic001G531500 Sobic001G531500 Sobic009G123900--Sobic001G531500 Sobic004G019800 Sobic004G019800 Sobic009G123900--Sobic004G019800 Sobic002G402700 Sobic002G402700 Sobic009G123900--Sobic002G402700 Sobic007G005400 Sobic007G005400 Sobic009G123900--Sobic007G005400 Sobic004G268300 Sobic004G268300 Sobic009G123900--Sobic004G268300 Sobic004G086150 Sobic004G086150 Sobic009G248801--Sobic004G086150 Sobic002G244200 Sobic002G244200 Sobic009G248801--Sobic002G244200 Sobic003G160100 Sobic003G160100 Sobic009G248801--Sobic003G160100 Sobic005G095000 Sobic005G095000 Sobic009G248801--Sobic005G095000 Sobic007G202300 Sobic007G202300 Sobic009G248801--Sobic007G202300 Sobic009G248801--Sobic005G133600 Sobic008G101100 Sobic008G101100 Sobic009G248801--Sobic008G101100 Sobic007G090403 Sobic007G090403 Sobic009G248801--Sobic007G090403 Sobic008G166550 Sobic008G166550 Sobic009G248801--Sobic008G166550 Sobic001G223550 Sobic001G223550 Sobic005G133600--Sobic001G223550 Sobic005G133600--Sobic009G248801 Sobic005G133600--Sobic008G101100 Sobic005G133600--Sobic004G253700 Sobic005G133600--Sobic003G160100 Sobic007G185300 Sobic007G185300 Sobic005G133600--Sobic007G185300 Sobic005G133600--Sobic007G090403 Sobic005G133600--Sobic007G010700 Sobic005G133600--Sobic005G095000 Sobic004G253700--Sobic008G101100 Sobic005G089400 Sobic005G089400 Sobic004G253700--Sobic005G089400 Sobic008G122100 Sobic008G122100 Sobic004G253700--Sobic008G122100 Sobic004G253700--Sobic005G133600 Sobic004G253700--Sobic007G010700 Sobic001G000501 Sobic001G000501 Sobic004G253700--Sobic001G000501 Sobic004G253700--Sobic009G248801 Sobic003G416000 Sobic003G416000 Sobic004G253700--Sobic003G416000 Sobic008G105366 Sobic008G105366 Sobic004G253700--Sobic008G105366 Sobic007G010700--Sobic004G070500 Sobic007G010700--Sobic005G053200 Sobic007G010700--Sobic001G000501 Sobic007G010700--Sobic004G253700 Sobic007G010700--Sobic004G034600 Sobic007G010700--Sobic005G133600 Sobic003G061200 Sobic003G061200 Sobic007G010700--Sobic003G061200 Sobic002G249300 Sobic002G249300 Sobic007G010700--Sobic002G249300 Sobic007G010700--Sobic005G089400 Sobic003G146500--Sobic002G118200 Sobic003G146500--Sobic001G531500 Sobic003G146500--Sobic004G070500 Sobic003G146500--Sobic007G090403 Sobic001G512500 Sobic001G512500 Sobic003G146500--Sobic001G512500 Sobic006G133900 Sobic006G133900 Sobic003G146500--Sobic006G133900 Sobic003G146500--Sobic009G123900 Sobic005G118400 Sobic005G118400 Sobic003G146500--Sobic005G118400 Sobic009G093100 Sobic009G093100 Sobic003G146500--Sobic009G093100 Sobic001G062900--Sobic007G090403 Sobic003G342100 Sobic003G342100 Sobic001G062900--Sobic003G342100 Sobic009G215500 Sobic009G215500 Sobic001G062900--Sobic009G215500 Sobic001G073900 Sobic001G073900 Sobic001G062900--Sobic001G073900 Sobic001G530900 Sobic001G530900 Sobic001G062900--Sobic001G530900 Sobic001G062900--Sobic001G531500 Sobic003G332700 Sobic003G332700 Sobic001G062900--Sobic003G332700 Sobic001G105200 Sobic001G105200 Sobic001G062900--Sobic001G105200 Sobic005G001700 Sobic005G001700 Sobic001G062900--Sobic005G001700 Sobic001G373900 Sobic001G373900 Sobic001G519900--Sobic001G373900 Sobic004G334300 Sobic004G334300 Sobic001G519900--Sobic004G334300 Sobic002G308700 Sobic002G308700 Sobic001G519900--Sobic002G308700 Sobic003G186000 Sobic003G186000 Sobic001G519900--Sobic003G186000 Sobic005G162500 Sobic005G162500 Sobic001G519900--Sobic005G162500 Sobic004G356700 Sobic004G356700 Sobic001G519900--Sobic004G356700 Sobic001G519900--Sobic001G375100 Sobic001G192000 Sobic001G192000 Sobic001G519900--Sobic001G192000 Sobic006G259800 Sobic006G259800 Sobic001G519900--Sobic006G259800
Octagon: transcription factors


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