Gene annotation
Transcriptome id Sobic.002G022100.1
Synonym Sb02g002040
Functional annotation OsFBX212 - F-box domain containing protein, expressed
UniProt C5X8Q6
Pfam -
Panther DB PTHR32133 PTHR32133:SF100
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g03100.1 : OsFBX212 - F-box domain containing protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ93971 , KQK02397
Barley HORVU6Hr1G082260.2 , HORVU6Hr1G082260.3 , HORVU6Hr1G082260.1 , HORVU6Hr1G082260.6 , HORVU6Hr1G082260.4 , HORVU6Hr1G082260.5 , HORVU5Hr1G119360.1
Wheat TraesCS4A02G348200 , TraesCS5A02G451000 , TraesCSU02G142000 , TraesCS5B02G524800 , TraesCS6A02G341000 , TraesCS7B02G077900 , TraesCS5D02G461200 , TraesCS1B02G390900 , TraesCS1B02G390900
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G048900 - -
2 Sobic.007G141380 - -
3 Sobic.002G016100 OsFBD13 - F-box and FBD domain containing protein, expressed -
4 Sobic.002G103100 - -
5 Sobic.003G164950 - -
6 Sobic.007G198400 MBTB32 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
7 Sobic.004G230700 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
8 Sobic.009G185100 seven in absentia protein family domain containing protein, expressed -
9 Sobic.009G260350 - -
10 Sobic.002G237900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLE6 - cellulose synthase-like family E, expressed -
11 Sobic.004G125500 - -
12 Sobic.002G408100 -(PubMedID : 29751546)@transporter, monovalent cation:proton antiporter-2 family, putative, expressed K14724: SLC9A8, solute carrier family 9 (sodium/hydrogen exchanger), member 8
13 Sobic.003G418733 - -
14 Sobic.008G105366 - -
15 Sobic.004G133900 - -
16 Sobic.004G188000 histone H3, putative, expressed K11253: histone H3
17 Sobic.008G089800 ulp1 protease family, C-terminal catalytic domain containing protein, expressed -
18 Sobic.001G236700 programmed cell death protein 2, putative, expressed -
19 Sobic.003G160466 - -
20 Sobic.005G019500 - -


Gene co-expression network
sample Sobic002G022100 Sobic002G022100 Sobic002G048900 Sobic002G048900 Sobic002G022100--Sobic002G048900 Sobic007G141380 Sobic007G141380 Sobic002G022100--Sobic007G141380 Sobic002G016100 Sobic002G016100 Sobic002G022100--Sobic002G016100 Sobic002G103100 Sobic002G103100 Sobic002G022100--Sobic002G103100 Sobic003G164950 Sobic003G164950 Sobic002G022100--Sobic003G164950 Sobic007G198400 Sobic007G198400 Sobic002G022100--Sobic007G198400 Sobic004G230700 Sobic004G230700 Sobic002G022100--Sobic004G230700 Sobic009G185100 Sobic009G185100 Sobic002G022100--Sobic009G185100 Sobic009G260350 Sobic009G260350 Sobic002G022100--Sobic009G260350 Sobic002G048900--Sobic002G022100 Sobic002G048900--Sobic002G016100 Sobic002G048900--Sobic007G141380 Sobic004G133900 Sobic004G133900 Sobic002G048900--Sobic004G133900 Sobic007G035800 Sobic007G035800 Sobic002G048900--Sobic007G035800 Sobic002G048900--Sobic002G103100 Sobic002G048900--Sobic007G198400 Sobic007G198500 Sobic007G198500 Sobic002G048900--Sobic007G198500 Sobic002G408100 Sobic002G408100 Sobic002G048900--Sobic002G408100 Sobic007G141380--Sobic004G230700 Sobic007G141380--Sobic007G198400 Sobic007G141380--Sobic002G022100 Sobic007G141380--Sobic009G260350 Sobic002G237900 Sobic002G237900 Sobic007G141380--Sobic002G237900 Sobic008G105366 Sobic008G105366 Sobic007G141380--Sobic008G105366 Sobic007G141380--Sobic002G408100 Sobic005G219300 Sobic005G219300 Sobic007G141380--Sobic005G219300 Sobic006G072601 Sobic006G072601 Sobic007G141380--Sobic006G072601 Sobic002G016100--Sobic002G022100 Sobic002G016100--Sobic002G103100 Sobic002G016100--Sobic002G048900 Sobic002G016100--Sobic009G260350 Sobic002G016100--Sobic003G164950 Sobic001G236700 Sobic001G236700 Sobic002G016100--Sobic001G236700 Sobic002G016100--Sobic007G198400 Sobic002G016100--Sobic009G185100 Sobic002G016100--Sobic007G141380 Sobic002G103100--Sobic003G164950 Sobic008G089800 Sobic008G089800 Sobic002G103100--Sobic008G089800 Sobic002G103100--Sobic007G198400 Sobic003G418733 Sobic003G418733 Sobic002G103100--Sobic003G418733 Sobic002G103100--Sobic002G022100 Sobic004G188000 Sobic004G188000 Sobic002G103100--Sobic004G188000 Sobic002G118101 Sobic002G118101 Sobic002G103100--Sobic002G118101 Sobic007G202300 Sobic007G202300 Sobic002G103100--Sobic007G202300 Sobic002G103100--Sobic002G408100 Sobic003G164950--Sobic002G103100 Sobic003G164950--Sobic008G089800 Sobic006G056800 Sobic006G056800 Sobic003G164950--Sobic006G056800 Sobic003G164950--Sobic004G188000 Sobic003G164950--Sobic002G022100 Sobic001G284475 Sobic001G284475 Sobic003G164950--Sobic001G284475 Sobic003G164950--Sobic003G418733 Sobic006G061900 Sobic006G061900 Sobic003G164950--Sobic006G061900 Sobic003G164950--Sobic002G118101 Sobic007G198400--Sobic007G141380 Sobic001G227900 Sobic001G227900 Sobic007G198400--Sobic001G227900 Sobic007G198400--Sobic004G230700 Sobic007G198400--Sobic006G072601 Sobic004G038800 Sobic004G038800 Sobic007G198400--Sobic004G038800 Sobic007G198400--Sobic008G105366 Sobic007G198400--Sobic007G202300 Sobic002G017500 Sobic002G017500 Sobic007G198400--Sobic002G017500 Sobic003G416000 Sobic003G416000 Sobic007G198400--Sobic003G416000 Sobic004G230700--Sobic007G141380 Sobic004G230700--Sobic007G198400 Sobic004G230700--Sobic009G260350 Sobic010G057666 Sobic010G057666 Sobic004G230700--Sobic010G057666 Sobic010G033100 Sobic010G033100 Sobic004G230700--Sobic010G033100 Sobic004G230700--Sobic006G072601 Sobic004G230700--Sobic002G408100 Sobic004G230700--Sobic002G022100 Sobic004G230700--Sobic008G105366 Sobic009G185100--Sobic002G022100 Sobic002G022200 Sobic002G022200 Sobic009G185100--Sobic002G022200 Sobic009G185100--Sobic002G016100 Sobic009G185100--Sobic002G103100 Sobic009G185100--Sobic007G141380 Sobic009G185100--Sobic009G260350 Sobic009G185100--Sobic003G164950 Sobic001G337350 Sobic001G337350 Sobic009G185100--Sobic001G337350 Sobic005G170900 Sobic005G170900 Sobic009G185100--Sobic005G170900 Sobic009G260350--Sobic008G105366 Sobic009G260350--Sobic004G230700 Sobic009G260350--Sobic010G057666 Sobic009G260350--Sobic007G141380 Sobic009G260350--Sobic010G033100 Sobic009G260350--Sobic007G198400 Sobic009G260350--Sobic004G038800 Sobic005G007000 Sobic005G007000 Sobic009G260350--Sobic005G007000 Sobic009G260350--Sobic006G072601
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.