Gene annotation
Transcriptome id Sobic.007G035800.1
Synonym ATTPS21, Sb07g003080, terpene synthase, TPS21, SbTPS5
Functional annotation "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene and beta-bisabolene, cytoplasm" (PubMedID : 21880075)
terpene synthase, putative, expressed
UniProt C5YN30
Pfam PF01397 PF03936
Panther DB PTHR31225 PTHR31225:SF4
NCBI CDD -
KEGG Orthology K15803; (-)-germacrene D synthase
Gene Ontology GO:0016829; lyase activity GO:0010333terpene synthase activity GO:0008152metabolic process GO:0000287magnesium ion binding


Orthologs (automatic annotation)
TAIR AT5G23960 : terpene synthase 21
RAP-DB (Rice) LOC_Os08g04500.1 : terpene synthase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G048900 - -
2 Sobic.002G011700 expressed protein -
3 Sobic.004G304200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
4 Sobic.002G100700 expressed protein -
5 Sobic.003G001701 - -
6 Sobic.002G098200 expressed protein -
7 Sobic.005G043600 coatomer subunit beta, putative, expressed K17302: COPB2, coatomer subunit beta'
8 Sobic.002G022100 OsFBX212 - F-box domain containing protein, expressed -
9 Sobic.005G092200 resistance protein, putative, expressed -
10 Sobic.005G171400 expressed protein -
11 Sobic.002G013400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G375950 - -
13 Sobic.004G105700 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.003G216000 pleiotropic drug resistance protein, putative, expressed -
15 Sobic.010G262400 expressed protein -
16 Sobic.001G247550 - -
17 Sobic.001G247550 - -
18 Sobic.001G247550 - -
19 Sobic.002G379932 - -
20 Sobic.K044414 - -


Gene co-expression network
sample Sobic007G035800 Sobic007G035800 Sobic002G048900 Sobic002G048900 Sobic007G035800--Sobic002G048900 Sobic002G011700 Sobic002G011700 Sobic007G035800--Sobic002G011700 Sobic004G304200 Sobic004G304200 Sobic007G035800--Sobic004G304200 Sobic002G100700 Sobic002G100700 Sobic007G035800--Sobic002G100700 Sobic003G001701 Sobic003G001701 Sobic007G035800--Sobic003G001701 Sobic002G098200 Sobic002G098200 Sobic007G035800--Sobic002G098200 Sobic005G043600 Sobic005G043600 Sobic007G035800--Sobic005G043600 Sobic002G022100 Sobic002G022100 Sobic007G035800--Sobic002G022100 Sobic005G092200 Sobic005G092200 Sobic007G035800--Sobic005G092200 Sobic002G048900--Sobic002G022100 Sobic002G016100 Sobic002G016100 Sobic002G048900--Sobic002G016100 Sobic007G141380 Sobic007G141380 Sobic002G048900--Sobic007G141380 Sobic004G133900 Sobic004G133900 Sobic002G048900--Sobic004G133900 Sobic002G048900--Sobic007G035800 Sobic002G103100 Sobic002G103100 Sobic002G048900--Sobic002G103100 Sobic007G198400 Sobic007G198400 Sobic002G048900--Sobic007G198400 Sobic007G198500 Sobic007G198500 Sobic002G048900--Sobic007G198500 Sobic002G408100 Sobic002G408100 Sobic002G048900--Sobic002G408100 Sobic001G247550 Sobic001G247550 Sobic002G011700--Sobic001G247550 Sobic010G230900 Sobic010G230900 Sobic002G011700--Sobic010G230900 Sobic008G048900 Sobic008G048900 Sobic002G011700--Sobic008G048900 Sobic002G011700--Sobic002G098200 Sobic002G011700--Sobic005G043600 Sobic001G354400 Sobic001G354400 Sobic002G011700--Sobic001G354400 Sobic010G230800 Sobic010G230800 Sobic002G011700--Sobic010G230800 Sobic003G216000 Sobic003G216000 Sobic004G304200--Sobic003G216000 Sobic005G137400 Sobic005G137400 Sobic004G304200--Sobic005G137400 Sobic004G169700 Sobic004G169700 Sobic004G304200--Sobic004G169700 Sobic004G304200--Sobic002G098200 Sobic004G246200 Sobic004G246200 Sobic004G304200--Sobic004G246200 Sobic003G366400 Sobic003G366400 Sobic004G304200--Sobic003G366400 Sobic005G151700 Sobic005G151700 Sobic004G304200--Sobic005G151700 Sobic004G260000 Sobic004G260000 Sobic004G304200--Sobic004G260000 Sobic004G074500 Sobic004G074500 Sobic004G304200--Sobic004G074500 Sobic007G187300 Sobic007G187300 Sobic002G100700--Sobic007G187300 Sobic006G030700 Sobic006G030700 Sobic002G100700--Sobic006G030700 Sobic006G100332 Sobic006G100332 Sobic002G100700--Sobic006G100332 Sobic009G226300 Sobic009G226300 Sobic002G100700--Sobic009G226300 Sobic001G249300 Sobic001G249300 Sobic002G100700--Sobic001G249300 Sobic005G018500 Sobic005G018500 Sobic002G100700--Sobic005G018500 Sobic002G100700--Sobic005G151700 Sobic009G054500 Sobic009G054500 Sobic002G100700--Sobic009G054500 Sobic002G100700--Sobic004G260000 Sobic008G110151 Sobic008G110151 Sobic003G001701--Sobic008G110151 Sobic007G191150 Sobic007G191150 Sobic003G001701--Sobic007G191150 Sobic010G272700 Sobic010G272700 Sobic003G001701--Sobic010G272700 Sobic005G032700 Sobic005G032700 Sobic003G001701--Sobic005G032700 Sobic002G247700 Sobic002G247700 Sobic003G001701--Sobic002G247700 Sobic001G209000 Sobic001G209000 Sobic003G001701--Sobic001G209000 Sobic001G355850 Sobic001G355850 Sobic003G001701--Sobic001G355850 Sobic003G254400 Sobic003G254400 Sobic003G001701--Sobic003G254400 Sobic007G121800 Sobic007G121800 Sobic003G001701--Sobic007G121800 Sobic002G058200 Sobic002G058200 Sobic002G098200--Sobic002G058200 Sobic002G098200--Sobic004G304200 Sobic002G098200--Sobic003G216000 Sobic002G098200--Sobic005G137400 Sobic002G098200--Sobic005G043600 Sobic009G012900 Sobic009G012900 Sobic002G098200--Sobic009G012900 Sobic002G098200--Sobic002G100700 Sobic002G098200--Sobic004G169700 Sobic002G011600 Sobic002G011600 Sobic002G098200--Sobic002G011600 Sobic005G043600--Sobic007G198500 Sobic005G043600--Sobic002G058200 Sobic005G043900 Sobic005G043900 Sobic005G043600--Sobic005G043900 Sobic008G175032 Sobic008G175032 Sobic005G043600--Sobic008G175032 Sobic005G043600--Sobic002G098200 Sobic005G043600--Sobic008G048900 Sobic003G203200 Sobic003G203200 Sobic005G043600--Sobic003G203200 Sobic001G359500 Sobic001G359500 Sobic005G043600--Sobic001G359500 Sobic005G043600--Sobic001G247550 Sobic002G022100--Sobic002G048900 Sobic002G022100--Sobic007G141380 Sobic002G022100--Sobic002G016100 Sobic002G022100--Sobic002G103100 Sobic003G164950 Sobic003G164950 Sobic002G022100--Sobic003G164950 Sobic002G022100--Sobic007G198400 Sobic004G230700 Sobic004G230700 Sobic002G022100--Sobic004G230700 Sobic009G185100 Sobic009G185100 Sobic002G022100--Sobic009G185100 Sobic009G260350 Sobic009G260350 Sobic002G022100--Sobic009G260350 Sobic010G207325 Sobic010G207325 Sobic005G092200--Sobic010G207325 Sobic001G361400 Sobic001G361400 Sobic005G092200--Sobic001G361400 Sobic005G025001 Sobic005G025001 Sobic005G092200--Sobic005G025001 Sobic010G059100 Sobic010G059100 Sobic005G092200--Sobic010G059100 Sobic006G025132 Sobic006G025132 Sobic005G092200--Sobic006G025132 Sobic004G242250 Sobic004G242250 Sobic005G092200--Sobic004G242250 Sobic002G074600 Sobic002G074600 Sobic005G092200--Sobic002G074600 Sobic007G181801 Sobic007G181801 Sobic005G092200--Sobic007G181801 Sobic007G116733 Sobic007G116733 Sobic005G092200--Sobic007G116733
Octagon: transcription factors


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