Gene annotation
| Transcriptome id | Sobic.004G144150.1 |
|---|---|
| Synonym | - |
| Functional annotation | - |
| UniProt | A0A1Z5RNH3 |
| Pfam | PF03015 |
| Panther DB | PTHR11011 |
| NCBI CDD | - |
| KEGG Orthology | - |
| Gene Ontology | - |
Orthologs (automatic annotation)
| TAIR | AT3G11980 : Jojoba acyl CoA reductase-related male sterility protein |
|---|---|
| RAP-DB (Rice) | LOC_Os03g07140.1 : male sterility protein, putative, expressed |
| MaizeGDB (Corn) | - |
| Brachypodium | - |
| Barley | - |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.004G144200 | male sterility protein, putative, expressed | K13356: alcohol-forming fatty acyl-CoA reductase |
| 2 | Sobic.007G153001 | - | - |
| 3 | Sobic.001G075101 | - | - |
| 4 | Sobic.006G026400 | - | - |
| 5 | Sobic.007G143200 | Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- | - |
| 6 | Sobic.007G143100 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Up-reguralion under drought(PubMedID : 24916767)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@- | - |
| 7 | Sobic.002G342100 | no apical meristem protein, putative, expressed | - |
| 8 | Sobic.008G040900 | amino acid permease family protein, putative, expressed | K03294: basic amino acid/polyamine antiporter, APA family |
| 9 | Sobic.003G083000 | glycosyl hydrolase family 10 protein, putative, expressed | - |
| 10 | Sobic.007G073750 | - | - |
| 11 | Sobic.009G068900 | WRKY67, expressed | - |
| 12 | Sobic.007G169600 | L1P family of ribosomal proteins domain containing protein, expressed | K02865: RP-L10Ae, large subunit ribosomal protein L10Ae |
| 13 | Sobic.009G076700 | expressed protein | - |
| 14 | Sobic.002G037400 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed | K09840: 9-cis-epoxycarotenoid dioxygenase |
| 15 | Sobic.005G016900 | CRP11 - Cysteine-rich family protein precursor, expressed | - |
| 16 | Sobic.007G055700 | "Production of (E)-alpha-berg-amotene, sesquisabinene A, (E)-beta-farnesene, zingiberene, beta-bisabolene and beta-sesquiphellandrene, cytoplasm"(PubMedID : 21880075)@Protein terpene synthase 10 (Os)(PubMedID : 27208977)@terpene synthase, putative, expressed | - |
| 17 | Sobic.006G161600 | expressed protein | - |
| 18 | Sobic.006G203000 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed | K17893: AOX1, ubiquinol oxidase |
| 19 | Sobic.001G469600 | "similar to Mannitol transporter, up-regulated under drought stress, mapped onto a stay green QTL (QSTG meta4.1)"(PubMedID : 24655390)@similar to Mannitol transporter(PubMedID : 24655390)@transporter family protein, putative, expressed | - |
| 20 | Sobic.010G054500 | 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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