Gene annotation
Transcriptome id Sobic.004G144200.1
Synonym MS2, Sb04g018431, FAR2
Functional annotation male sterility protein, putative, expressed
UniProt A0A1Z5RMM3
Pfam PF07993
Panther DB PTHR11011 PTHR11011:SF25
NCBI CDD -
KEGG Orthology K13356; alcohol-forming fatty acyl-CoA reductase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11980 : Jojoba acyl CoA reductase-related male sterility protein
RAP-DB (Rice) LOC_Os03g07140.1 : male sterility protein, putative, expressed
MaizeGDB (Corn) Zm00025a053356
Brachypodium PNT78120
Barley HORVU4Hr1G074700.6 , HORVU4Hr1G074700.4 , HORVU4Hr1G074700.5 , HORVU4Hr1G074700.2 , HORVU4Hr1G074700.3 , HORVU4Hr1G074700.1 , HORVU2Hr1G086620.1
Wheat TraesCS4B02G283200 , TraesCS4B02G283200 , TraesCS4A02G020500 , TraesCS4D02G282000 , TraesCS4D02G282000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G144150 - -
2 Sobic.001G075101 - -
3 Sobic.007G153001 - -
4 Sobic.009G216900 down-regulated TF in developmental senescence(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.009G099000 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
6 Sobic.002G342100 no apical meristem protein, putative, expressed -
7 Sobic.002G037400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@9-cis-epoxycarotenoid dioxygenase 1, chloroplast precursor, putative, expressed K09840: 9-cis-epoxycarotenoid dioxygenase
8 Sobic.004G170032 - -
9 Sobic.002G023900 Homeobox domain containing protein, expressed -
10 Sobic.003G227600 CPuORF29 - conserved peptide uORF-containing transcript, expressed -
11 Sobic.003G083000 glycosyl hydrolase family 10 protein, putative, expressed -
12 Sobic.007G169600 L1P family of ribosomal proteins domain containing protein, expressed K02865: RP-L10Ae, large subunit ribosomal protein L10Ae
13 Sobic.006G203000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@immutans protein, putative, expressed K17893: AOX1, ubiquinol oxidase
14 Sobic.006G026400 - -
15 Sobic.008G040900 amino acid permease family protein, putative, expressed K03294: basic amino acid/polyamine antiporter, APA family
16 Sobic.001G309732 - -
17 Sobic.001G509400 - -
18 Sobic.001G157400 Class III HD ZIP family protein(PubMedID : 23915383)@START domain containing protein, expressed K09338: homeobox-leucine zipper protein
19 Sobic.003G040800 WRKY102, expressed -
20 Sobic.002G182800 expressed protein -


Gene co-expression network
sample Sobic004G144200 Sobic004G144200 Sobic004G144150 Sobic004G144150 Sobic004G144200--Sobic004G144150 Sobic001G075101 Sobic001G075101 Sobic004G144200--Sobic001G075101 Sobic007G153001 Sobic007G153001 Sobic004G144200--Sobic007G153001 Sobic009G216900 Sobic009G216900 Sobic004G144200--Sobic009G216900 Sobic009G099000 Sobic009G099000 Sobic004G144200--Sobic009G099000 Sobic002G342100 Sobic002G342100 Sobic004G144200--Sobic002G342100 Sobic002G037400 Sobic002G037400 Sobic004G144200--Sobic002G037400 Sobic004G170032 Sobic004G170032 Sobic004G144200--Sobic004G170032 Sobic002G023900 Sobic002G023900 Sobic004G144200--Sobic002G023900 Sobic004G144150--Sobic004G144200 Sobic004G144150--Sobic007G153001 Sobic004G144150--Sobic001G075101 Sobic006G026400 Sobic006G026400 Sobic004G144150--Sobic006G026400 Sobic007G143200 Sobic007G143200 Sobic004G144150--Sobic007G143200 Sobic007G143100 Sobic007G143100 Sobic004G144150--Sobic007G143100 Sobic004G144150--Sobic002G342100 Sobic008G040900 Sobic008G040900 Sobic004G144150--Sobic008G040900 Sobic003G083000 Sobic003G083000 Sobic004G144150--Sobic003G083000 Sobic007G169600 Sobic007G169600 Sobic001G075101--Sobic007G169600 Sobic006G203000 Sobic006G203000 Sobic001G075101--Sobic006G203000 Sobic001G075101--Sobic002G037400 Sobic001G075101--Sobic003G083000 Sobic002G331450 Sobic002G331450 Sobic001G075101--Sobic002G331450 Sobic001G075101--Sobic007G153001 Sobic002G325600 Sobic002G325600 Sobic001G075101--Sobic002G325600 Sobic001G509400 Sobic001G509400 Sobic001G075101--Sobic001G509400 Sobic002G182800 Sobic002G182800 Sobic001G075101--Sobic002G182800 Sobic007G153001--Sobic001G075101 Sobic007G153001--Sobic007G169600 Sobic007G153001--Sobic003G083000 Sobic007G153001--Sobic002G023900 Sobic007G153001--Sobic002G342100 Sobic007G153001--Sobic002G331450 Sobic007G153001--Sobic002G037400 Sobic007G153001--Sobic006G203000 Sobic007G153001--Sobic002G325600 Sobic003G227600 Sobic003G227600 Sobic009G216900--Sobic003G227600 Sobic003G233900 Sobic003G233900 Sobic009G216900--Sobic003G233900 Sobic009G128300 Sobic009G128300 Sobic009G216900--Sobic009G128300 Sobic003G040800 Sobic003G040800 Sobic009G216900--Sobic003G040800 Sobic009G216900--Sobic002G182800 Sobic009G216900--Sobic002G342100 Sobic009G216900--Sobic001G509400 Sobic004G285100 Sobic004G285100 Sobic009G216900--Sobic004G285100 Sobic003G079800 Sobic003G079800 Sobic009G216900--Sobic003G079800 Sobic003G278700 Sobic003G278700 Sobic009G099000--Sobic003G278700 Sobic001G157400 Sobic001G157400 Sobic009G099000--Sobic001G157400 Sobic009G099000--Sobic006G026400 Sobic001G050800 Sobic001G050800 Sobic009G099000--Sobic001G050800 Sobic001G460300 Sobic001G460300 Sobic009G099000--Sobic001G460300 Sobic009G099000--Sobic008G040900 Sobic006G194600 Sobic006G194600 Sobic009G099000--Sobic006G194600 Sobic005G231700 Sobic005G231700 Sobic009G099000--Sobic005G231700 Sobic004G172100 Sobic004G172100 Sobic009G099000--Sobic004G172100 Sobic002G342100--Sobic009G128300 Sobic002G342100--Sobic001G075101 Sobic002G342100--Sobic002G182800 Sobic002G342100--Sobic003G227600 Sobic002G342100--Sobic002G331450 Sobic002G342100--Sobic007G169600 Sobic002G342100--Sobic003G083000 Sobic002G342100--Sobic007G153001 Sobic002G342100--Sobic002G037400 Sobic002G037400--Sobic006G203000 Sobic002G037400--Sobic007G169600 Sobic002G037400--Sobic001G075101 Sobic002G037400--Sobic003G083000 Sobic002G037400--Sobic002G331450 Sobic002G037400--Sobic006G026400 Sobic009G076700 Sobic009G076700 Sobic002G037400--Sobic009G076700 Sobic002G037400--Sobic007G143100 Sobic005G016900 Sobic005G016900 Sobic002G037400--Sobic005G016900 Sobic002G110200 Sobic002G110200 Sobic004G170032--Sobic002G110200 Sobic004G170032--Sobic002G182800 Sobic004G170032--Sobic009G128300 Sobic004G170032--Sobic002G331450 Sobic004G170032--Sobic001G075101 Sobic004G170032--Sobic007G169600 Sobic003G198150 Sobic003G198150 Sobic004G170032--Sobic003G198150 Sobic004G170032--Sobic001G509400 Sobic004G170032--Sobic003G227600 Sobic002G023900--Sobic001G075101 Sobic002G023900--Sobic006G203000 Sobic002G023900--Sobic007G153001 Sobic002G023900--Sobic002G037400 Sobic002G023900--Sobic007G169600 Sobic002G023900--Sobic003G083000 Sobic002G023900--Sobic002G331450 Sobic002G023900--Sobic003G040800 Sobic001G106000 Sobic001G106000 Sobic002G023900--Sobic001G106000
Octagon: transcription factors


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