Gene annotation
Transcriptome id Sobic.004G187000.1
Synonym
Functional annotation calmodulin binding protein, putative, expressed
UniProt A0A194YQK6
Pfam PF07887
Panther DB PTHR31713 PTHR31713:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress GO:0005516calmodulin binding


Orthologs (automatic annotation)
TAIR AT4G25800 : Calmodulin-binding protein
RAP-DB (Rice) LOC_Os11g44310.1 : calmodulin binding protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G263000 expressed protein -
2 Sobic.009G196300 gibberellin 2-beta-dioxygenase, putative, expressed K04125: gibberellin 2beta-dioxygenase
3 Sobic.009G009000 terpene synthase, putative, expressed -
4 Sobic.005G165400 OsSub17 - Putative Subtilisin homologue, expressed -
5 Sobic.001G012200 similar to Cytochrome P450 71E1(PubMedID : 24655390)@4-hydroxyphenylacetaldehyde oxime monooxygenase(PubMedID : 27964718)@cytochrome P450, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
6 Sobic.001G012300 "similar to Cytochrome P450 79A1, up-regulated under drought stress "(PubMedID : 24655390)@similar to Cytochrome P450 79A1(PubMedID : 24655390)@protein and mRNA level correlates with dhurrin amount(PubMedID : 12114576)@Tyrosine N-monooxygenase(PubMedID : 27964718)@"Tyrosine N-monooxygenase, conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime, ER"(PubMedID : 21880107)@"Tyrosine N-monooxygenase, conversion of L-tyrosine to p-hydroxyphenylacetaldehyde oxime, ER"(PubMedID : 26361733)@cytochrome P450, putative, expressed K13027: tyrosine N-monooxygenase
7 Sobic.010G225001 - -
8 Sobic.006G084500 expressed protein -
9 Sobic.005G105850 - K16296: serine carboxypeptidase-like clade I
10 Sobic.002G256100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
11 Sobic.004G047400 uncharacterized protein CPn_0526/CP_0226/CPj0526/CpB0547, putative, expressed K06041: kdsD, arabinose-5-phosphate isomerase
12 Sobic.004G099900 early nodulin 93 ENOD93 protein, putative, expressed -
13 Sobic.001G459900 leucine-rich repeat resistance protein, putative, expressed -
14 Sobic.001G012600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
15 Sobic.005G099500 nucleoside-triphosphatase, putative, expressed K14641: apyrase
16 Sobic.001G502500 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.004G328601 - K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
18 Sobic.002G415300 - -
19 Sobic.002G415400 - -
20 Sobic.003G068300 transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic004G187000 Sobic004G187000 Sobic004G263000 Sobic004G263000 Sobic004G187000--Sobic004G263000 Sobic009G196300 Sobic009G196300 Sobic004G187000--Sobic009G196300 Sobic009G009000 Sobic009G009000 Sobic004G187000--Sobic009G009000 Sobic005G165400 Sobic005G165400 Sobic004G187000--Sobic005G165400 Sobic001G012200 Sobic001G012200 Sobic004G187000--Sobic001G012200 Sobic001G012300 Sobic001G012300 Sobic004G187000--Sobic001G012300 Sobic010G225001 Sobic010G225001 Sobic004G187000--Sobic010G225001 Sobic006G084500 Sobic006G084500 Sobic004G187000--Sobic006G084500 Sobic005G105850 Sobic005G105850 Sobic004G187000--Sobic005G105850 Sobic001G127700 Sobic001G127700 Sobic004G263000--Sobic001G127700 Sobic004G060700 Sobic004G060700 Sobic004G263000--Sobic004G060700 Sobic007G009600 Sobic007G009600 Sobic004G263000--Sobic007G009600 Sobic007G170800 Sobic007G170800 Sobic004G263000--Sobic007G170800 Sobic008G123600 Sobic008G123600 Sobic004G263000--Sobic008G123600 Sobic006G172700 Sobic006G172700 Sobic004G263000--Sobic006G172700 Sobic001G003600 Sobic001G003600 Sobic004G263000--Sobic001G003600 Sobic002G329500 Sobic002G329500 Sobic004G263000--Sobic002G329500 Sobic009G115050 Sobic009G115050 Sobic004G263000--Sobic009G115050 Sobic009G196300--Sobic009G009000 Sobic001G281300 Sobic001G281300 Sobic009G196300--Sobic001G281300 Sobic009G196300--Sobic004G187000 Sobic001G429900 Sobic001G429900 Sobic009G196300--Sobic001G429900 Sobic001G170700 Sobic001G170700 Sobic009G196300--Sobic001G170700 Sobic006G054700 Sobic006G054700 Sobic009G196300--Sobic006G054700 Sobic005G099500 Sobic005G099500 Sobic009G196300--Sobic005G099500 Sobic002G256100 Sobic002G256100 Sobic009G196300--Sobic002G256100 Sobic002G073800 Sobic002G073800 Sobic009G196300--Sobic002G073800 Sobic004G024300 Sobic004G024300 Sobic009G009000--Sobic004G024300 Sobic006G189700 Sobic006G189700 Sobic009G009000--Sobic006G189700 Sobic002G388700 Sobic002G388700 Sobic009G009000--Sobic002G388700 Sobic009G009000--Sobic002G256100 Sobic009G009000--Sobic009G196300 Sobic002G119900 Sobic002G119900 Sobic009G009000--Sobic002G119900 Sobic004G262400 Sobic004G262400 Sobic009G009000--Sobic004G262400 Sobic001G533000 Sobic001G533000 Sobic009G009000--Sobic001G533000 Sobic001G502500 Sobic001G502500 Sobic009G009000--Sobic001G502500 Sobic002G415400 Sobic002G415400 Sobic005G165400--Sobic002G415400 Sobic002G415300 Sobic002G415300 Sobic005G165400--Sobic002G415300 Sobic003G068300 Sobic003G068300 Sobic005G165400--Sobic003G068300 Sobic005G165400--Sobic009G115050 Sobic005G165400--Sobic002G329500 Sobic008G163200 Sobic008G163200 Sobic005G165400--Sobic008G163200 Sobic001G435600 Sobic001G435600 Sobic005G165400--Sobic001G435600 Sobic005G165400--Sobic004G060700 Sobic005G165400--Sobic008G123600 Sobic001G012200--Sobic001G012300 Sobic001G012600 Sobic001G012600 Sobic001G012200--Sobic001G012600 Sobic001G334900 Sobic001G334900 Sobic001G012200--Sobic001G334900 Sobic001G012400 Sobic001G012400 Sobic001G012200--Sobic001G012400 Sobic001G012200--Sobic010G225001 Sobic007G181000 Sobic007G181000 Sobic001G012200--Sobic007G181000 Sobic004G257700 Sobic004G257700 Sobic001G012200--Sobic004G257700 Sobic001G255300 Sobic001G255300 Sobic001G012200--Sobic001G255300 Sobic001G345900 Sobic001G345900 Sobic001G012200--Sobic001G345900 Sobic001G012300--Sobic001G012200 Sobic001G012300--Sobic001G012600 Sobic001G012300--Sobic005G165400 Sobic001G012300--Sobic001G334900 Sobic001G012300--Sobic007G181000 Sobic001G012300--Sobic001G012400 Sobic001G012300--Sobic003G068300 Sobic005G218700 Sobic005G218700 Sobic001G012300--Sobic005G218700 Sobic001G012300--Sobic001G255300 Sobic010G225001--Sobic001G012200 Sobic010G225001--Sobic007G181000 Sobic010G225001--Sobic001G012300 Sobic010G225001--Sobic001G012600 Sobic010G225001--Sobic001G334900 Sobic010G225001--Sobic001G345900 Sobic004G328900 Sobic004G328900 Sobic010G225001--Sobic004G328900 Sobic006G038850 Sobic006G038850 Sobic010G225001--Sobic006G038850 Sobic010G225001--Sobic005G165400 Sobic006G084500--Sobic008G123600 Sobic002G020100 Sobic002G020100 Sobic006G084500--Sobic002G020100 Sobic006G084500--Sobic001G003600 Sobic006G084500--Sobic006G172700 Sobic001G069500 Sobic001G069500 Sobic006G084500--Sobic001G069500 Sobic004G076000 Sobic004G076000 Sobic006G084500--Sobic004G076000 Sobic007G090424 Sobic007G090424 Sobic006G084500--Sobic007G090424 Sobic005G056201 Sobic005G056201 Sobic006G084500--Sobic005G056201 Sobic009G059100 Sobic009G059100 Sobic006G084500--Sobic009G059100 Sobic007G166600 Sobic007G166600 Sobic005G105850--Sobic007G166600 Sobic005G105850--Sobic005G165400 Sobic010G202700 Sobic010G202700 Sobic005G105850--Sobic010G202700 Sobic002G102700 Sobic002G102700 Sobic005G105850--Sobic002G102700 Sobic006G147500 Sobic006G147500 Sobic005G105850--Sobic006G147500 Sobic006G001400 Sobic006G001400 Sobic005G105850--Sobic006G001400 Sobic005G105850--Sobic006G084500 Sobic001G188600 Sobic001G188600 Sobic005G105850--Sobic001G188600 Sobic005G218201 Sobic005G218201 Sobic005G105850--Sobic005G218201
Octagon: transcription factors


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