Gene annotation
Transcriptome id Sobic.002G256100.1
Synonym Sb02g029130, GAE6
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
UDP-glucuronate 4-epimerase, putative, expressed
UniProt C5X4N6
Pfam PF04321
Panther DB PTHR10366 PTHR10366:SF431
NCBI CDD KOG1371; UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase
KEGG Orthology K08679; UDP-glucuronate 4-epimerase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G23820 : UDP-D-glucuronate 4-epimerase 6
RAP-DB (Rice) LOC_Os08g41440.1 : UDP-glucuronate 4-epimerase, putative, expressed
MaizeGDB (Corn) Zm00025a022434 , Zm00025a042419 , Zm00025a047551 , Zm00025a049735 , Zm00025a030385 , Zm00025a005229 , Zm00025a052877 , Zm00025a032956
Brachypodium KQJ90895 , KQK01095
Barley HORVU7Hr1G053260.1 , HORVU7Hr1G053260.3 , HORVU7Hr1G053260.2 , HORVU7Hr1G053260.8 , HORVU7Hr1G053260.5 , HORVU7Hr1G053260.7 , HORVU7Hr1G053260.6 , HORVU5Hr1G075660.1 , HORVU7Hr1G031270.1 , HORVU7Hr1G053260.4
Wheat -
Populus -


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cDNA sequences
Sobic.002G256100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G533000 expressed protein -
2 Sobic.009G009000 terpene synthase, putative, expressed -
3 Sobic.010G238100 plant-specific domain TIGR01627 family protein, expressed -
4 Sobic.004G262400 expressed protein -
5 Sobic.002G119900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@dirigent, putative, expressed -
6 Sobic.003G379600 methyltransferase, putative, expressed -
7 Sobic.010G163732 - -
8 Sobic.004G184800 - -
9 Sobic.001G281300 dehydration response related protein, putative, expressed -
10 Sobic.006G189700 zinc finger, C3HC4 type domain containing protein, expressed -
11 Sobic.007G002800 phospholipase C, putative, expressed -
12 Sobic.003G341600 prenylated rab acceptor, putative, expressed -
13 Sobic.002G350700 beta-hexosaminidase precursor, putative, expressed K12373: hexosaminidase
14 Sobic.001G459900 leucine-rich repeat resistance protein, putative, expressed -
15 Sobic.004G151400 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
16 Sobic.007G198000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AIR12, putative, expressed -
17 Sobic.002G388700 myb-related protein Hv33, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.004G293100 phosphatase, putative, expressed -
19 Sobic.007G139100 SKP1-like protein 1B, putative, expressed K03094: SKP1, S-phase kinase-associated protein 1
20 Sobic.002G073800 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G


Gene co-expression network
sample Sobic002G256100 Sobic002G256100 Sobic001G533000 Sobic001G533000 Sobic002G256100--Sobic001G533000 Sobic009G009000 Sobic009G009000 Sobic002G256100--Sobic009G009000 Sobic010G238100 Sobic010G238100 Sobic002G256100--Sobic010G238100 Sobic004G262400 Sobic004G262400 Sobic002G256100--Sobic004G262400 Sobic002G119900 Sobic002G119900 Sobic002G256100--Sobic002G119900 Sobic003G379600 Sobic003G379600 Sobic002G256100--Sobic003G379600 Sobic010G163732 Sobic010G163732 Sobic002G256100--Sobic010G163732 Sobic004G184800 Sobic004G184800 Sobic002G256100--Sobic004G184800 Sobic001G281300 Sobic001G281300 Sobic002G256100--Sobic001G281300 Sobic001G533000--Sobic003G379600 Sobic006G137800 Sobic006G137800 Sobic001G533000--Sobic006G137800 Sobic004G345500 Sobic004G345500 Sobic001G533000--Sobic004G345500 Sobic007G198000 Sobic007G198000 Sobic001G533000--Sobic007G198000 Sobic001G529400 Sobic001G529400 Sobic001G533000--Sobic001G529400 Sobic003G078200 Sobic003G078200 Sobic001G533000--Sobic003G078200 Sobic010G047100 Sobic010G047100 Sobic001G533000--Sobic010G047100 Sobic004G171400 Sobic004G171400 Sobic001G533000--Sobic004G171400 Sobic003G160700 Sobic003G160700 Sobic001G533000--Sobic003G160700 Sobic004G024300 Sobic004G024300 Sobic009G009000--Sobic004G024300 Sobic006G189700 Sobic006G189700 Sobic009G009000--Sobic006G189700 Sobic002G388700 Sobic002G388700 Sobic009G009000--Sobic002G388700 Sobic009G009000--Sobic002G256100 Sobic009G196300 Sobic009G196300 Sobic009G009000--Sobic009G196300 Sobic009G009000--Sobic002G119900 Sobic009G009000--Sobic004G262400 Sobic009G009000--Sobic001G533000 Sobic001G502500 Sobic001G502500 Sobic009G009000--Sobic001G502500 Sobic010G238100--Sobic001G533000 Sobic001G054800 Sobic001G054800 Sobic010G238100--Sobic001G054800 Sobic002G291066 Sobic002G291066 Sobic010G238100--Sobic002G291066 Sobic003G338966 Sobic003G338966 Sobic010G238100--Sobic003G338966 Sobic001G096900 Sobic001G096900 Sobic010G238100--Sobic001G096900 Sobic010G238100--Sobic001G529400 Sobic009G167500 Sobic009G167500 Sobic010G238100--Sobic009G167500 Sobic010G176900 Sobic010G176900 Sobic010G238100--Sobic010G176900 Sobic010G238100--Sobic007G198000 Sobic004G216300 Sobic004G216300 Sobic004G262400--Sobic004G216300 Sobic006G075400 Sobic006G075400 Sobic004G262400--Sobic006G075400 Sobic007G002800 Sobic007G002800 Sobic004G262400--Sobic007G002800 Sobic003G260300 Sobic003G260300 Sobic004G262400--Sobic003G260300 Sobic007G017500 Sobic007G017500 Sobic004G262400--Sobic007G017500 Sobic010G182200 Sobic010G182200 Sobic004G262400--Sobic010G182200 Sobic002G175100 Sobic002G175100 Sobic004G262400--Sobic002G175100 Sobic002G375100 Sobic002G375100 Sobic004G262400--Sobic002G375100 Sobic001G313600 Sobic001G313600 Sobic004G262400--Sobic001G313600 Sobic002G119900--Sobic007G002800 Sobic001G059700 Sobic001G059700 Sobic002G119900--Sobic001G059700 Sobic010G085800 Sobic010G085800 Sobic002G119900--Sobic010G085800 Sobic001G310300 Sobic001G310300 Sobic002G119900--Sobic001G310300 Sobic006G106100 Sobic006G106100 Sobic002G119900--Sobic006G106100 Sobic001G014000 Sobic001G014000 Sobic002G119900--Sobic001G014000 Sobic002G119900--Sobic002G175100 Sobic010G008400 Sobic010G008400 Sobic002G119900--Sobic010G008400 Sobic001G444800 Sobic001G444800 Sobic002G119900--Sobic001G444800 Sobic003G379600--Sobic006G137800 Sobic003G379600--Sobic007G198000 Sobic003G379600--Sobic001G533000 Sobic001G459900 Sobic001G459900 Sobic003G379600--Sobic001G459900 Sobic001G475500 Sobic001G475500 Sobic003G379600--Sobic001G475500 Sobic006G159600 Sobic006G159600 Sobic003G379600--Sobic006G159600 Sobic004G217450 Sobic004G217450 Sobic003G379600--Sobic004G217450 Sobic003G379600--Sobic003G160700 Sobic003G379600--Sobic004G345500 Sobic003G383100 Sobic003G383100 Sobic010G163732--Sobic003G383100 Sobic003G137700 Sobic003G137700 Sobic010G163732--Sobic003G137700 Sobic001G439100 Sobic001G439100 Sobic010G163732--Sobic001G439100 Sobic003G174700 Sobic003G174700 Sobic010G163732--Sobic003G174700 Sobic010G171800 Sobic010G171800 Sobic010G163732--Sobic010G171800 Sobic009G120700 Sobic009G120700 Sobic010G163732--Sobic009G120700 Sobic002G095400 Sobic002G095400 Sobic010G163732--Sobic002G095400 Sobic010G215800 Sobic010G215800 Sobic010G163732--Sobic010G215800 Sobic001G160100 Sobic001G160100 Sobic010G163732--Sobic001G160100 Sobic004G184800--Sobic002G256100 Sobic006G278100 Sobic006G278100 Sobic004G184800--Sobic006G278100 Sobic003G122100 Sobic003G122100 Sobic004G184800--Sobic003G122100 Sobic004G184800--Sobic009G009000 Sobic004G263000 Sobic004G263000 Sobic004G184800--Sobic004G263000 Sobic010G258500 Sobic010G258500 Sobic004G184800--Sobic010G258500 Sobic009G232200 Sobic009G232200 Sobic004G184800--Sobic009G232200 Sobic004G184800--Sobic001G533000 Sobic004G182500 Sobic004G182500 Sobic004G184800--Sobic004G182500 Sobic004G231300 Sobic004G231300 Sobic001G281300--Sobic004G231300 Sobic001G281300--Sobic001G459900 Sobic010G023800 Sobic010G023800 Sobic001G281300--Sobic010G023800 Sobic001G281300--Sobic003G379600 Sobic001G533400 Sobic001G533400 Sobic001G281300--Sobic001G533400 Sobic002G201600 Sobic002G201600 Sobic001G281300--Sobic002G201600 Sobic010G023900 Sobic010G023900 Sobic001G281300--Sobic010G023900 Sobic009G212200 Sobic009G212200 Sobic001G281300--Sobic009G212200 Sobic009G227400 Sobic009G227400 Sobic001G281300--Sobic009G227400
Octagon: transcription factors


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