Gene annotation
Transcriptome id Sobic.004G262400.1
Synonym Sb04g030060
Functional annotation expressed protein
UniProt C5XZX6
Pfam -
Panther DB PTHR34996 PTHR34996:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g48280.1 : expressed protein
MaizeGDB (Corn) Zm00025a021793
Brachypodium -
Barley HORVU6Hr1G070130.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G216300 - -
2 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
3 Sobic.007G002800 phospholipase C, putative, expressed -
4 Sobic.003G260300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
5 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
6 Sobic.010G182200 elongation factor Tu, putative, expressed K03231: elongation factor 1-alpha
7 Sobic.002G175100 60S ribosomal protein L44, putative, expressed K02929: RP-L44e, large subunit ribosomal protein L44e
8 Sobic.002G375100 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
9 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
10 Sobic.001G502400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
11 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
12 Sobic.003G426400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
14 Sobic.001G195200 cytochrome P450, putative, expressed -
15 Sobic.001G295200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
16 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
17 Sobic.002G385100 40S ribosomal protein S9-2, putative, expressed K02997: RP-S9e, small subunit ribosomal protein S9e
18 Sobic.004G294400 expansin precursor, putative, expressed -
19 Sobic.006G235100 expressed protein -
20 Sobic.009G215200 60S ribosomal protein L28-1, putative, expressed K02903: RP-L28e, large subunit ribosomal protein L28e


Gene co-expression network
sample Sobic004G262400 Sobic004G262400 Sobic004G216300 Sobic004G216300 Sobic004G262400--Sobic004G216300 Sobic006G075400 Sobic006G075400 Sobic004G262400--Sobic006G075400 Sobic007G002800 Sobic007G002800 Sobic004G262400--Sobic007G002800 Sobic003G260300 Sobic003G260300 Sobic004G262400--Sobic003G260300 Sobic007G017500 Sobic007G017500 Sobic004G262400--Sobic007G017500 Sobic010G182200 Sobic010G182200 Sobic004G262400--Sobic010G182200 Sobic002G175100 Sobic002G175100 Sobic004G262400--Sobic002G175100 Sobic002G375100 Sobic002G375100 Sobic004G262400--Sobic002G375100 Sobic001G313600 Sobic001G313600 Sobic004G262400--Sobic001G313600 Sobic006G141700 Sobic006G141700 Sobic004G216300--Sobic006G141700 Sobic009G188000 Sobic009G188000 Sobic004G216300--Sobic009G188000 Sobic003G427800 Sobic003G427800 Sobic004G216300--Sobic003G427800 Sobic002G351300 Sobic002G351300 Sobic004G216300--Sobic002G351300 Sobic001G295200 Sobic001G295200 Sobic004G216300--Sobic001G295200 Sobic004G216300--Sobic001G313600 Sobic004G141100 Sobic004G141100 Sobic004G216300--Sobic004G141100 Sobic009G109000 Sobic009G109000 Sobic004G216300--Sobic009G109000 Sobic004G216300--Sobic007G017500 Sobic006G075400--Sobic007G017500 Sobic004G294400 Sobic004G294400 Sobic006G075400--Sobic004G294400 Sobic003G228900 Sobic003G228900 Sobic006G075400--Sobic003G228900 Sobic003G043600 Sobic003G043600 Sobic006G075400--Sobic003G043600 Sobic003G268600 Sobic003G268600 Sobic006G075400--Sobic003G268600 Sobic001G330400 Sobic001G330400 Sobic006G075400--Sobic001G330400 Sobic003G432700 Sobic003G432700 Sobic006G075400--Sobic003G432700 Sobic005G107900 Sobic005G107900 Sobic006G075400--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic006G075400--Sobic001G502400 Sobic004G055100 Sobic004G055100 Sobic007G002800--Sobic004G055100 Sobic007G002800--Sobic002G175100 Sobic004G331400 Sobic004G331400 Sobic007G002800--Sobic004G331400 Sobic009G054800 Sobic009G054800 Sobic007G002800--Sobic009G054800 Sobic006G103000 Sobic006G103000 Sobic007G002800--Sobic006G103000 Sobic010G085800 Sobic010G085800 Sobic007G002800--Sobic010G085800 Sobic002G255300 Sobic002G255300 Sobic007G002800--Sobic002G255300 Sobic001G310300 Sobic001G310300 Sobic007G002800--Sobic001G310300 Sobic003G436700 Sobic003G436700 Sobic007G002800--Sobic003G436700 Sobic003G260300--Sobic003G228900 Sobic001G079300 Sobic001G079300 Sobic003G260300--Sobic001G079300 Sobic004G191400 Sobic004G191400 Sobic003G260300--Sobic004G191400 Sobic003G260300--Sobic006G075400 Sobic003G260300--Sobic003G432700 Sobic003G260300--Sobic001G502400 Sobic009G184000 Sobic009G184000 Sobic003G260300--Sobic009G184000 Sobic004G191300 Sobic004G191300 Sobic003G260300--Sobic004G191300 Sobic001G195200 Sobic001G195200 Sobic003G260300--Sobic001G195200 Sobic007G017500--Sobic006G075400 Sobic007G017500--Sobic004G294400 Sobic007G017500--Sobic003G228900 Sobic007G017500--Sobic003G268600 Sobic007G017500--Sobic004G141100 Sobic007G017500--Sobic001G330400 Sobic004G219800 Sobic004G219800 Sobic007G017500--Sobic004G219800 Sobic004G041900 Sobic004G041900 Sobic007G017500--Sobic004G041900 Sobic007G017500--Sobic003G043600 Sobic010G182600 Sobic010G182600 Sobic010G182200--Sobic010G182600 Sobic001G091801 Sobic001G091801 Sobic010G182200--Sobic001G091801 Sobic010G182200--Sobic002G175100 Sobic010G182200--Sobic002G375100 Sobic001G016400 Sobic001G016400 Sobic010G182200--Sobic001G016400 Sobic004G145801 Sobic004G145801 Sobic010G182200--Sobic004G145801 Sobic007G212600 Sobic007G212600 Sobic010G182200--Sobic007G212600 Sobic002G259000 Sobic002G259000 Sobic010G182200--Sobic002G259000 Sobic001G374700 Sobic001G374700 Sobic010G182200--Sobic001G374700 Sobic002G175100--Sobic004G331400 Sobic002G175100--Sobic001G374700 Sobic009G215200 Sobic009G215200 Sobic002G175100--Sobic009G215200 Sobic006G116700 Sobic006G116700 Sobic002G175100--Sobic006G116700 Sobic002G175100--Sobic001G091801 Sobic006G047400 Sobic006G047400 Sobic002G175100--Sobic006G047400 Sobic009G050300 Sobic009G050300 Sobic002G175100--Sobic009G050300 Sobic002G081600 Sobic002G081600 Sobic002G175100--Sobic002G081600 Sobic003G346600 Sobic003G346600 Sobic002G175100--Sobic003G346600 Sobic001G018900 Sobic001G018900 Sobic002G375100--Sobic001G018900 Sobic002G375100--Sobic006G116700 Sobic002G375100--Sobic001G374700 Sobic003G408100 Sobic003G408100 Sobic002G375100--Sobic003G408100 Sobic001G036900 Sobic001G036900 Sobic002G375100--Sobic001G036900 Sobic002G375100--Sobic009G215200 Sobic002G375100--Sobic001G016400 Sobic007G197800 Sobic007G197800 Sobic002G375100--Sobic007G197800 Sobic002G375100--Sobic009G050300 Sobic001G313600--Sobic005G107900 Sobic001G313600--Sobic001G502400 Sobic001G313600--Sobic009G188000 Sobic006G235100 Sobic006G235100 Sobic001G313600--Sobic006G235100 Sobic001G313600--Sobic003G432700 Sobic005G011300 Sobic005G011300 Sobic001G313600--Sobic005G011300 Sobic001G313600--Sobic006G075400 Sobic001G304100 Sobic001G304100 Sobic001G313600--Sobic001G304100 Sobic001G313600--Sobic009G184000
Octagon: transcription factors


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