Gene annotation
Transcriptome id Sobic.004G216300.1
Synonym
Functional annotation -
UniProt A0A194YR20
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G141700 OsGrx_C2.2 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
2 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
3 Sobic.003G427800 Cupin domain containing protein, expressed -
4 Sobic.002G351300 expressed protein -
5 Sobic.001G295200 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
6 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
7 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
8 Sobic.009G109000 expressed protein -
9 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
10 Sobic.004G220000 kinase, pfkB family, putative, expressed K00856: E2.7.1.20, adenosine kinase
11 Sobic.007G058400 Superior methylation activity against resveratrol compared with that of sbOMT3(PubMedID : 25033820)@O-methyltransferase, putative, expressed -
12 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
13 Sobic.006G235100 expressed protein -
14 Sobic.004G229400 phosphate-induced protein 1 conserved region domain containing protein, expressed -
15 Sobic.001G502400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
16 Sobic.004G262400 expressed protein -
17 Sobic.005G113300 -(PubMedID : 26976818)@serine hydroxymethyltransferase, mitochondrial precursor, putative, expressed K00600: glyA, glycine hydroxymethyltransferase
18 Sobic.002G375100 ribosomal protein S2, putative, expressed K02998: RP-SAe, small subunit ribosomal protein SAe
19 Sobic.010G064000 expressed protein -
20 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -


Gene co-expression network
sample Sobic004G216300 Sobic004G216300 Sobic006G141700 Sobic006G141700 Sobic004G216300--Sobic006G141700 Sobic009G188000 Sobic009G188000 Sobic004G216300--Sobic009G188000 Sobic003G427800 Sobic003G427800 Sobic004G216300--Sobic003G427800 Sobic002G351300 Sobic002G351300 Sobic004G216300--Sobic002G351300 Sobic001G295200 Sobic001G295200 Sobic004G216300--Sobic001G295200 Sobic001G313600 Sobic001G313600 Sobic004G216300--Sobic001G313600 Sobic004G141100 Sobic004G141100 Sobic004G216300--Sobic004G141100 Sobic009G109000 Sobic009G109000 Sobic004G216300--Sobic009G109000 Sobic007G017500 Sobic007G017500 Sobic004G216300--Sobic007G017500 Sobic006G141700--Sobic001G295200 Sobic006G141700--Sobic009G188000 Sobic006G141700--Sobic004G141100 Sobic002G375100 Sobic002G375100 Sobic006G141700--Sobic002G375100 Sobic006G116700 Sobic006G116700 Sobic006G141700--Sobic006G116700 Sobic001G018900 Sobic001G018900 Sobic006G141700--Sobic001G018900 Sobic003G426400 Sobic003G426400 Sobic006G141700--Sobic003G426400 Sobic006G141700--Sobic001G313600 Sobic003G007600 Sobic003G007600 Sobic006G141700--Sobic003G007600 Sobic009G188000--Sobic001G313600 Sobic001G304100 Sobic001G304100 Sobic009G188000--Sobic001G304100 Sobic005G107900 Sobic005G107900 Sobic009G188000--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic009G188000--Sobic001G502400 Sobic001G238400 Sobic001G238400 Sobic009G188000--Sobic001G238400 Sobic006G235100 Sobic006G235100 Sobic009G188000--Sobic006G235100 Sobic003G084400 Sobic003G084400 Sobic009G188000--Sobic003G084400 Sobic008G009400 Sobic008G009400 Sobic009G188000--Sobic008G009400 Sobic009G188000--Sobic001G295200 Sobic009G205500 Sobic009G205500 Sobic003G427800--Sobic009G205500 Sobic004G229500 Sobic004G229500 Sobic003G427800--Sobic004G229500 Sobic001G195200 Sobic001G195200 Sobic003G427800--Sobic001G195200 Sobic004G229400 Sobic004G229400 Sobic003G427800--Sobic004G229400 Sobic010G064000 Sobic010G064000 Sobic003G427800--Sobic010G064000 Sobic008G158732 Sobic008G158732 Sobic003G427800--Sobic008G158732 Sobic009G183900 Sobic009G183900 Sobic003G427800--Sobic009G183900 Sobic007G058400 Sobic007G058400 Sobic003G427800--Sobic007G058400 Sobic004G219800 Sobic004G219800 Sobic003G427800--Sobic004G219800 Sobic002G351300--Sobic004G141100 Sobic002G351300--Sobic008G009400 Sobic002G351300--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic002G351300--Sobic006G075400 Sobic003G299300 Sobic003G299300 Sobic002G351300--Sobic003G299300 Sobic002G351300--Sobic009G205500 Sobic002G351300--Sobic006G235100 Sobic004G041900 Sobic004G041900 Sobic002G351300--Sobic004G041900 Sobic004G294400 Sobic004G294400 Sobic002G351300--Sobic004G294400 Sobic001G295200--Sobic006G141700 Sobic001G295200--Sobic001G018900 Sobic001G295200--Sobic006G116700 Sobic001G361600 Sobic001G361600 Sobic001G295200--Sobic001G361600 Sobic005G113300 Sobic005G113300 Sobic001G295200--Sobic005G113300 Sobic003G078200 Sobic003G078200 Sobic001G295200--Sobic003G078200 Sobic001G036900 Sobic001G036900 Sobic001G295200--Sobic001G036900 Sobic007G197800 Sobic007G197800 Sobic001G295200--Sobic007G197800 Sobic009G215200 Sobic009G215200 Sobic001G295200--Sobic009G215200 Sobic001G313600--Sobic005G107900 Sobic001G313600--Sobic001G502400 Sobic001G313600--Sobic009G188000 Sobic001G313600--Sobic006G235100 Sobic003G432700 Sobic003G432700 Sobic001G313600--Sobic003G432700 Sobic005G011300 Sobic005G011300 Sobic001G313600--Sobic005G011300 Sobic001G313600--Sobic006G075400 Sobic001G313600--Sobic001G304100 Sobic009G184000 Sobic009G184000 Sobic001G313600--Sobic009G184000 Sobic004G141100--Sobic002G351300 Sobic004G141100--Sobic006G235100 Sobic010G082600 Sobic010G082600 Sobic004G141100--Sobic010G082600 Sobic004G141100--Sobic007G017500 Sobic004G141100--Sobic006G075400 Sobic004G141100--Sobic008G009400 Sobic006G054800 Sobic006G054800 Sobic004G141100--Sobic006G054800 Sobic006G008000 Sobic006G008000 Sobic004G141100--Sobic006G008000 Sobic008G066401 Sobic008G066401 Sobic004G141100--Sobic008G066401 Sobic003G311800 Sobic003G311800 Sobic009G109000--Sobic003G311800 Sobic004G297900 Sobic004G297900 Sobic009G109000--Sobic004G297900 Sobic001G049900 Sobic001G049900 Sobic009G109000--Sobic001G049900 Sobic008G055100 Sobic008G055100 Sobic009G109000--Sobic008G055100 Sobic003G053400 Sobic003G053400 Sobic009G109000--Sobic003G053400 Sobic003G411200 Sobic003G411200 Sobic009G109000--Sobic003G411200 Sobic004G348800 Sobic004G348800 Sobic009G109000--Sobic004G348800 Sobic009G109000--Sobic008G009400 Sobic001G430100 Sobic001G430100 Sobic009G109000--Sobic001G430100 Sobic007G017500--Sobic006G075400 Sobic007G017500--Sobic004G294400 Sobic003G228900 Sobic003G228900 Sobic007G017500--Sobic003G228900 Sobic003G268600 Sobic003G268600 Sobic007G017500--Sobic003G268600 Sobic007G017500--Sobic004G141100 Sobic001G330400 Sobic001G330400 Sobic007G017500--Sobic001G330400 Sobic007G017500--Sobic004G219800 Sobic007G017500--Sobic004G041900 Sobic003G043600 Sobic003G043600 Sobic007G017500--Sobic003G043600
Octagon: transcription factors


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