Gene annotation
Transcriptome id Sobic.009G196300.1
Synonym GA2OX2, Sb09g025470, ATGA2OX2
Functional annotation gibberellin 2-beta-dioxygenase, putative, expressed
UniProt C5Z0X5
Pfam PF14226 PF03171
Panther DB PTHR10209 PTHR10209:SF180
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology K04125; gibberellin 2beta-dioxygenase
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G30040 : gibberellin 2-oxidase
RAP-DB (Rice) LOC_Os01g55240.1 : gibberellin 2-beta-dioxygenase, putative, expressed
MaizeGDB (Corn) Zm00025a044221 , Zm00025a027518 , Zm00025a040019
Brachypodium KQK09810 , KQK05406
Barley HORVU1Hr1G076730.1 , HORVU1Hr1G076730.2 , HORVU1Hr1G076730.3 , HORVU1Hr1G076730.4 , HORVU1Hr1G076730.5
Wheat TraesCS1B02G347600 , TraesCS1D02G336900 , TraesCS3A02G294000 , TraesCS3D02G293800 , TraesCS1A02G334400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G009000 terpene synthase, putative, expressed -
2 Sobic.001G281300 dehydration response related protein, putative, expressed -
3 Sobic.004G187000 calmodulin binding protein, putative, expressed -
4 Sobic.001G429900 phospholipase A2, putative, expressed -
5 Sobic.001G170700 OsSub30 - Putative Subtilisin homologue, expressed -
6 Sobic.006G054700 serine/threonine-protein kinase NAK, putative, expressed K13430: serine/threonine-protein kinase PBS1
7 Sobic.005G099500 nucleoside-triphosphatase, putative, expressed K14641: apyrase
8 Sobic.002G256100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucuronate 4-epimerase, putative, expressed K08679: UDP-glucuronate 4-epimerase
9 Sobic.002G073800 vacuolar ATPase G subunit, putative, expressed K02152: ATPeV1G, V-type H+-transporting ATPase subunit G
10 Sobic.003G379600 methyltransferase, putative, expressed -
11 Sobic.003G377700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Sugar transporter(PubMedID : 27330561)@Sugar transporter(PubMedID : 27330561)@nodulin MtN3 family protein, putative, expressed K15382: SLC50A, solute carrier family 50 (sugar transporter)
12 Sobic.001G012600 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
13 Sobic.010G074600 expressed protein -
14 Sobic.004G037700 AIG2-like family domain containing protein, expressed -
15 Sobic.006G189700 zinc finger, C3HC4 type domain containing protein, expressed -
16 Sobic.008G051900 expressed protein K02155: ATPeV0C, V-type H+-transporting ATPase 16kDa proteolipid subunit
17 Sobic.004G263000 expressed protein -
18 Sobic.001G459900 leucine-rich repeat resistance protein, putative, expressed -
19 Sobic.003G111500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@polyprenyl synthetase, putative, expressed K13789: geranylgeranyl diphosphate synthase, type II
20 Sobic.006G084500 expressed protein -


Gene co-expression network
sample Sobic009G196300 Sobic009G196300 Sobic009G009000 Sobic009G009000 Sobic009G196300--Sobic009G009000 Sobic001G281300 Sobic001G281300 Sobic009G196300--Sobic001G281300 Sobic004G187000 Sobic004G187000 Sobic009G196300--Sobic004G187000 Sobic001G429900 Sobic001G429900 Sobic009G196300--Sobic001G429900 Sobic001G170700 Sobic001G170700 Sobic009G196300--Sobic001G170700 Sobic006G054700 Sobic006G054700 Sobic009G196300--Sobic006G054700 Sobic005G099500 Sobic005G099500 Sobic009G196300--Sobic005G099500 Sobic002G256100 Sobic002G256100 Sobic009G196300--Sobic002G256100 Sobic002G073800 Sobic002G073800 Sobic009G196300--Sobic002G073800 Sobic004G024300 Sobic004G024300 Sobic009G009000--Sobic004G024300 Sobic006G189700 Sobic006G189700 Sobic009G009000--Sobic006G189700 Sobic002G388700 Sobic002G388700 Sobic009G009000--Sobic002G388700 Sobic009G009000--Sobic002G256100 Sobic009G009000--Sobic009G196300 Sobic002G119900 Sobic002G119900 Sobic009G009000--Sobic002G119900 Sobic004G262400 Sobic004G262400 Sobic009G009000--Sobic004G262400 Sobic001G533000 Sobic001G533000 Sobic009G009000--Sobic001G533000 Sobic001G502500 Sobic001G502500 Sobic009G009000--Sobic001G502500 Sobic004G231300 Sobic004G231300 Sobic001G281300--Sobic004G231300 Sobic001G459900 Sobic001G459900 Sobic001G281300--Sobic001G459900 Sobic010G023800 Sobic010G023800 Sobic001G281300--Sobic010G023800 Sobic003G379600 Sobic003G379600 Sobic001G281300--Sobic003G379600 Sobic001G533400 Sobic001G533400 Sobic001G281300--Sobic001G533400 Sobic002G201600 Sobic002G201600 Sobic001G281300--Sobic002G201600 Sobic010G023900 Sobic010G023900 Sobic001G281300--Sobic010G023900 Sobic009G212200 Sobic009G212200 Sobic001G281300--Sobic009G212200 Sobic009G227400 Sobic009G227400 Sobic001G281300--Sobic009G227400 Sobic004G263000 Sobic004G263000 Sobic004G187000--Sobic004G263000 Sobic004G187000--Sobic009G196300 Sobic004G187000--Sobic009G009000 Sobic005G165400 Sobic005G165400 Sobic004G187000--Sobic005G165400 Sobic001G012200 Sobic001G012200 Sobic004G187000--Sobic001G012200 Sobic001G012300 Sobic001G012300 Sobic004G187000--Sobic001G012300 Sobic010G225001 Sobic010G225001 Sobic004G187000--Sobic010G225001 Sobic006G084500 Sobic006G084500 Sobic004G187000--Sobic006G084500 Sobic005G105850 Sobic005G105850 Sobic004G187000--Sobic005G105850 Sobic001G429900--Sobic006G189700 Sobic002G210300 Sobic002G210300 Sobic001G429900--Sobic002G210300 Sobic008G103700 Sobic008G103700 Sobic001G429900--Sobic008G103700 Sobic010G238800 Sobic010G238800 Sobic001G429900--Sobic010G238800 Sobic002G252000 Sobic002G252000 Sobic001G429900--Sobic002G252000 Sobic002G128800 Sobic002G128800 Sobic001G429900--Sobic002G128800 Sobic001G526200 Sobic001G526200 Sobic001G429900--Sobic001G526200 Sobic007G124301 Sobic007G124301 Sobic001G429900--Sobic007G124301 Sobic002G270000 Sobic002G270000 Sobic001G429900--Sobic002G270000 Sobic010G162400 Sobic010G162400 Sobic001G170700--Sobic010G162400 Sobic001G170700--Sobic002G073800 Sobic010G074600 Sobic010G074600 Sobic001G170700--Sobic010G074600 Sobic005G155200 Sobic005G155200 Sobic001G170700--Sobic005G155200 Sobic009G253300 Sobic009G253300 Sobic001G170700--Sobic009G253300 Sobic001G170700--Sobic001G502500 Sobic004G328601 Sobic004G328601 Sobic001G170700--Sobic004G328601 Sobic001G012500 Sobic001G012500 Sobic001G170700--Sobic001G012500 Sobic001G170700--Sobic002G388700 Sobic001G352500 Sobic001G352500 Sobic006G054700--Sobic001G352500 Sobic006G054700--Sobic002G128800 Sobic006G054700--Sobic008G103700 Sobic006G201400 Sobic006G201400 Sobic006G054700--Sobic006G201400 Sobic009G042900 Sobic009G042900 Sobic006G054700--Sobic009G042900 Sobic006G054700--Sobic002G252000 Sobic001G432000 Sobic001G432000 Sobic006G054700--Sobic001G432000 Sobic006G054700--Sobic002G270000 Sobic002G338400 Sobic002G338400 Sobic006G054700--Sobic002G338400 Sobic005G099500--Sobic010G074600 Sobic009G070800 Sobic009G070800 Sobic005G099500--Sobic009G070800 Sobic001G315200 Sobic001G315200 Sobic005G099500--Sobic001G315200 Sobic006G103900 Sobic006G103900 Sobic005G099500--Sobic006G103900 Sobic009G009500 Sobic009G009500 Sobic005G099500--Sobic009G009500 Sobic005G168700 Sobic005G168700 Sobic005G099500--Sobic005G168700 Sobic008G076401 Sobic008G076401 Sobic005G099500--Sobic008G076401 Sobic008G049200 Sobic008G049200 Sobic005G099500--Sobic008G049200 Sobic001G012600 Sobic001G012600 Sobic005G099500--Sobic001G012600 Sobic002G256100--Sobic001G533000 Sobic002G256100--Sobic009G009000 Sobic010G238100 Sobic010G238100 Sobic002G256100--Sobic010G238100 Sobic002G256100--Sobic004G262400 Sobic002G256100--Sobic002G119900 Sobic002G256100--Sobic003G379600 Sobic010G163732 Sobic010G163732 Sobic002G256100--Sobic010G163732 Sobic004G184800 Sobic004G184800 Sobic002G256100--Sobic004G184800 Sobic002G256100--Sobic001G281300 Sobic010G018400 Sobic010G018400 Sobic002G073800--Sobic010G018400 Sobic002G073800--Sobic009G212200 Sobic008G127500 Sobic008G127500 Sobic002G073800--Sobic008G127500 Sobic009G062000 Sobic009G062000 Sobic002G073800--Sobic009G062000 Sobic001G095632 Sobic001G095632 Sobic002G073800--Sobic001G095632 Sobic001G304400 Sobic001G304400 Sobic002G073800--Sobic001G304400 Sobic009G176000 Sobic009G176000 Sobic002G073800--Sobic009G176000 Sobic002G356400 Sobic002G356400 Sobic002G073800--Sobic002G356400 Sobic001G034700 Sobic001G034700 Sobic002G073800--Sobic001G034700
Octagon: transcription factors


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