Gene annotation
Transcriptome id Sobic.004G244500.1
Synonym Sb04g028510, CF1, DL3, DRP2B, ADL3
Functional annotation dynamin, putative, expressed
UniProt C5XZ82
Pfam PF01926 PF00169 PF02212 PF01031
Panther DB PTHR11566 PTHR11566:SF61
NCBI CDD KOG0446; Vacuolar sorting protein VPS1, dynamin, and related proteins
KEGG Orthology K01528; dynamin 1/3
Gene Ontology GO:0005525; GTP binding GO:0003924GTPase activity


Orthologs (automatic annotation)
TAIR AT1G59610 : dynamin-like 3
RAP-DB (Rice) LOC_Os02g50550.1 : dynamin, putative, expressed
MaizeGDB (Corn) Zm00025a049397 , Zm00025a042659 , Zm00025a021974
Brachypodium PNT76126 , KQK18747 , KQK02008
Barley HORVU7Hr1G040670.3 , HORVU7Hr1G040670.6 , HORVU7Hr1G040670.4 , HORVU7Hr1G040670.5 , HORVU7Hr1G040670.2 , HORVU7Hr1G040670.1 , HORVU6Hr1G077000.10 , HORVU6Hr1G077000.11 , HORVU6Hr1G077000.12 , HORVU6Hr1G077000.13 , HORVU6Hr1G077000.14 , HORVU6Hr1G077000.15 , HORVU6Hr1G077000.8 , HORVU6Hr1G077000.9 , HORVU6Hr1G077000.2 , HORVU6Hr1G077000.3 , HORVU6Hr1G077000.1 , HORVU6Hr1G077000.6 , HORVU6Hr1G077000.7 , HORVU6Hr1G077000.4 , HORVU6Hr1G077000.5
Wheat TraesCS6A02G312300 , TraesCS6B02G342500 , TraesCS7B02G104500 , TraesCS6D02G291700 , TraesCS6D02G291700 , TraesCS7A02G198100 , TraesCS6B02G342500 , TraesCS6A02G312300 , TraesCS6A02G312300 , TraesCS6A02G312300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G187900 ethylene-responsive protein related, putative, expressed -
2 Sobic.004G162600 ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
3 Sobic.005G038700 transcription factor, putative, expressed K14431: transcription factor TGA
4 Sobic.001G087500 - -
5 Sobic.004G205400 - -
6 Sobic.005G116601 - -
7 Sobic.003G250340 - K07976: Rab family, other
8 Sobic.010G118401 - -
9 Sobic.010G196200 OsSub51 - Putative Subtilisin homologue, expressed -
10 Sobic.010G278400 coiled-coil domain-containing protein 12, putative, expressed K12871: coiled-coil domain-containing protein 12
11 Sobic.004G096000 - -
12 Sobic.010G118600 sodium/potassium/calcium exchanger 1, putative, expressed -
13 Sobic.002G334900 S-domain receptor-like protein kinase, putative, expressed -
14 Sobic.007G165100 "domain confirmed by Pfam database, expressed in leaf and root, expression induced by IAA treatment"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
15 Sobic.003G352750 - -
16 Sobic.006G260101 - -
17 Sobic.008G134500 protein kinase domain containing protein, expressed -
18 Sobic.007G114650 - -
19 Sobic.010G068001 - K08679: UDP-glucuronate 4-epimerase
20 Sobic.009G203600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Receptor-like protein kinase HSL1(PubMedID : 31721651)@receptor-like protein kinase 5 precursor, putative, expressed -


Gene co-expression network
sample Sobic004G244500 Sobic004G244500 Sobic009G187900 Sobic009G187900 Sobic004G244500--Sobic009G187900 Sobic004G162600 Sobic004G162600 Sobic004G244500--Sobic004G162600 Sobic005G038700 Sobic005G038700 Sobic004G244500--Sobic005G038700 Sobic001G087500 Sobic001G087500 Sobic004G244500--Sobic001G087500 Sobic004G205400 Sobic004G205400 Sobic004G244500--Sobic004G205400 Sobic005G116601 Sobic005G116601 Sobic004G244500--Sobic005G116601 Sobic003G250340 Sobic003G250340 Sobic004G244500--Sobic003G250340 Sobic010G118401 Sobic010G118401 Sobic004G244500--Sobic010G118401 Sobic010G196200 Sobic010G196200 Sobic004G244500--Sobic010G196200 Sobic009G187900--Sobic004G162600 Sobic009G187900--Sobic003G250340 Sobic009G187900--Sobic001G087500 Sobic009G187900--Sobic005G038700 Sobic010G278400 Sobic010G278400 Sobic009G187900--Sobic010G278400 Sobic009G187900--Sobic004G244500 Sobic006G260101 Sobic006G260101 Sobic009G187900--Sobic006G260101 Sobic002G334900 Sobic002G334900 Sobic009G187900--Sobic002G334900 Sobic009G187900--Sobic004G205400 Sobic004G162600--Sobic009G187900 Sobic004G162600--Sobic004G205400 Sobic004G162600--Sobic006G260101 Sobic004G162600--Sobic003G250340 Sobic009G043200 Sobic009G043200 Sobic004G162600--Sobic009G043200 Sobic004G162600--Sobic010G196200 Sobic004G162600--Sobic005G116601 Sobic004G162600--Sobic002G334900 Sobic004G096000 Sobic004G096000 Sobic004G162600--Sobic004G096000 Sobic005G038700--Sobic003G250340 Sobic005G038700--Sobic010G196200 Sobic010G118600 Sobic010G118600 Sobic005G038700--Sobic010G118600 Sobic005G038700--Sobic009G187900 Sobic008G045300 Sobic008G045300 Sobic005G038700--Sobic008G045300 Sobic007G165100 Sobic007G165100 Sobic005G038700--Sobic007G165100 Sobic003G130650 Sobic003G130650 Sobic005G038700--Sobic003G130650 Sobic009G203600 Sobic009G203600 Sobic005G038700--Sobic009G203600 Sobic005G038700--Sobic001G087500 Sobic001G087500--Sobic010G278400 Sobic001G087500--Sobic004G205400 Sobic001G087500--Sobic009G187900 Sobic001G087500--Sobic010G118600 Sobic001G087500--Sobic005G116601 Sobic007G114650 Sobic007G114650 Sobic001G087500--Sobic007G114650 Sobic010G060701 Sobic010G060701 Sobic001G087500--Sobic010G060701 Sobic009G181900 Sobic009G181900 Sobic001G087500--Sobic009G181900 Sobic001G087500--Sobic010G118401 Sobic004G205400--Sobic006G260101 Sobic004G205400--Sobic005G116601 Sobic004G205400--Sobic001G087500 Sobic004G205400--Sobic004G162600 Sobic004G205400--Sobic010G060701 Sobic002G359200 Sobic002G359200 Sobic004G205400--Sobic002G359200 Sobic004G205400--Sobic010G278400 Sobic003G406240 Sobic003G406240 Sobic004G205400--Sobic003G406240 Sobic001G523300 Sobic001G523300 Sobic004G205400--Sobic001G523300 Sobic005G116601--Sobic010G118600 Sobic005G116601--Sobic004G205400 Sobic005G116601--Sobic001G087500 Sobic005G116601--Sobic003G250340 Sobic005G116601--Sobic004G162600 Sobic005G116601--Sobic003G130650 Sobic005G116601--Sobic010G196200 Sobic002G035100 Sobic002G035100 Sobic005G116601--Sobic002G035100 Sobic005G116601--Sobic005G038700 Sobic003G250340--Sobic010G196200 Sobic003G250340--Sobic008G045300 Sobic003G250340--Sobic005G038700 Sobic003G250340--Sobic003G130650 Sobic003G250340--Sobic009G203600 Sobic003G250340--Sobic010G118600 Sobic003G250340--Sobic007G114650 Sobic003G250340--Sobic009G187900 Sobic003G333150 Sobic003G333150 Sobic003G250340--Sobic003G333150 Sobic009G112500 Sobic009G112500 Sobic010G118401--Sobic009G112500 Sobic002G387000 Sobic002G387000 Sobic010G118401--Sobic002G387000 Sobic004G202750 Sobic004G202750 Sobic010G118401--Sobic004G202750 Sobic010G118401--Sobic010G278400 Sobic010G242000 Sobic010G242000 Sobic010G118401--Sobic010G242000 Sobic010G118401--Sobic007G114650 Sobic004G228000 Sobic004G228000 Sobic010G118401--Sobic004G228000 Sobic010G118401--Sobic001G087500 Sobic002G399000 Sobic002G399000 Sobic010G118401--Sobic002G399000 Sobic002G188200 Sobic002G188200 Sobic010G196200--Sobic002G188200 Sobic010G196200--Sobic003G250340 Sobic010G196200--Sobic008G045300 Sobic004G328800 Sobic004G328800 Sobic010G196200--Sobic004G328800 Sobic006G044466 Sobic006G044466 Sobic010G196200--Sobic006G044466 Sobic004G325832 Sobic004G325832 Sobic010G196200--Sobic004G325832 Sobic001G003300 Sobic001G003300 Sobic010G196200--Sobic001G003300 Sobic008G175933 Sobic008G175933 Sobic010G196200--Sobic008G175933 Sobic002G152000 Sobic002G152000 Sobic010G196200--Sobic002G152000
Octagon: transcription factors


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