Gene annotation
Transcriptome id Sobic.005G041400.2,Sobic.005G041400.3
Synonym Sb05g003450
Functional annotation expressed protein
UniProt C5Y515
Pfam PF02362
Panther DB PTHR31140 PTHR31140:SF19
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT5G06250 : AP2/B3-like transcriptional factor family protein
RAP-DB (Rice) LOC_Os12g06080.1 : expressed protein
MaizeGDB (Corn) Zm00025a033527 , Zm00025a027935 , Zm00025a023512 , Zm00025a038878 , Zm00025a053927
Brachypodium KQJ89377 , KQK02620 , KQK09293 , KQJ92192
Barley HORVU5Hr1G040620.3 , HORVU5Hr1G040620.2 , HORVU5Hr1G040620.1 , HORVU5Hr1G040620.5 , HORVU5Hr1G040620.4 , HORVU4Hr1G021650.21 , HORVU4Hr1G021650.20 , HORVU4Hr1G021650.22 , HORVU4Hr1G021650.17 , HORVU1Hr1G082670.10 , HORVU3Hr1G010060.2 , HORVU3Hr1G010060.1 , HORVU1Hr1G082670.8 , HORVU1Hr1G082670.9 , HORVU1Hr1G082670.6 , HORVU1Hr1G082670.7 , HORVU1Hr1G082670.4 , HORVU1Hr1G082670.5 , HORVU1Hr1G082670.2 , HORVU1Hr1G082670.3 , HORVU1Hr1G082670.1 , HORVU4Hr1G021650.7 , HORVU4Hr1G021650.8 , HORVU3Hr1G010140.5 , HORVU3Hr1G010140.4 , HORVU3Hr1G010140.1 , HORVU3Hr1G010140.3 , HORVU3Hr1G010140.2 , HORVU4Hr1G021650.18 , HORVU4Hr1G021650.19 , HORVU4Hr1G021650.14 , HORVU4Hr1G021650.15 , HORVU4Hr1G021650.16 , HORVU4Hr1G082090.3 , HORVU4Hr1G082090.2 , HORVU4Hr1G082090.1 , HORVU4Hr1G082090.4 , HORVU3Hr1G010100.1 , HORVU3Hr1G010100.2
Wheat TraesCS2D02G460900 , TraesCS4B02G117100 , TraesCS4D02G114900 , TraesCS5B02G126200 , TraesCS3D02G260100 , TraesCS5A02G127100 , TraesCS2A02G460700 , TraesCS2B02G482400 , TraesCS4A02G198300 , TraesCS4A02G198300 , TraesCS5D02G134700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G246300 expressed protein -
2 Sobic.009G210400 heavy metal-associated domain containing protein, expressed -
3 Sobic.008G048100 citrate-binding protein precursor, putative, expressed -
4 Sobic.001G173700 universal stress protein domain containing protein, putative, expressed -
5 Sobic.003G052100 receptor-like protein kinase 2 precursor, putative, expressed -
6 Sobic.006G077000 serine/threonine-protein kinase receptor precursor, putative, expressed -
7 Sobic.002G142200 expressed protein -
8 Sobic.005G231300 thaumatin, putative, expressed -
9 Sobic.001G479600 B3 DNA binding domain containing protein, expressed -
10 Sobic.009G096300 ATOFP17/OFP17, putative, expressed -
11 Sobic.010G176800 ABC transporter, ATP-binding protein, putative, expressed -
12 Sobic.010G256400 glycosyltransferase protein, putative, expressed -
13 Sobic.001G301400 expansin precursor, putative, expressed -
14 Sobic.006G194700 zinc finger, C3HC4 type domain containing protein, expressed K10663: E3 ubiquitin-protein ligase ATL4
15 Sobic.009G079900 endoglucanase precursor, putative, expressed -
16 Sobic.006G119000 X8 domain containing protein, expressed -
17 Sobic.001G316800 no apical meristem protein, putative, expressed -
18 Sobic.004G287700 expressed protein -
19 Sobic.006G171300 expansin precursor, putative, expressed -
20 Sobic.006G114600 "D11(Ortholog in rice:Tanabe et al., 2005(PubMedID : 31659897)@Wu et al., 2008)"("PubMedID : 26759170,PubMedID : 24597475")@cytochrome P450, putative, expressed K12639: CYP724B1, cytochrome P450 family 724 subfamily B polypeptide 1


Gene co-expression network
sample Sobic005G041400 Sobic005G041400 Sobic003G246300 Sobic003G246300 Sobic005G041400--Sobic003G246300 Sobic009G210400 Sobic009G210400 Sobic005G041400--Sobic009G210400 Sobic008G048100 Sobic008G048100 Sobic005G041400--Sobic008G048100 Sobic001G173700 Sobic001G173700 Sobic005G041400--Sobic001G173700 Sobic003G052100 Sobic003G052100 Sobic005G041400--Sobic003G052100 Sobic006G077000 Sobic006G077000 Sobic005G041400--Sobic006G077000 Sobic002G142200 Sobic002G142200 Sobic005G041400--Sobic002G142200 Sobic005G231300 Sobic005G231300 Sobic005G041400--Sobic005G231300 Sobic001G479600 Sobic001G479600 Sobic005G041400--Sobic001G479600 Sobic003G246300--Sobic001G173700 Sobic003G246300--Sobic009G210400 Sobic002G391200 Sobic002G391200 Sobic003G246300--Sobic002G391200 Sobic001G301400 Sobic001G301400 Sobic003G246300--Sobic001G301400 Sobic010G176800 Sobic010G176800 Sobic003G246300--Sobic010G176800 Sobic003G246300--Sobic003G052100 Sobic010G115000 Sobic010G115000 Sobic003G246300--Sobic010G115000 Sobic006G171300 Sobic006G171300 Sobic003G246300--Sobic006G171300 Sobic003G385900 Sobic003G385900 Sobic003G246300--Sobic003G385900 Sobic007G020100 Sobic007G020100 Sobic009G210400--Sobic007G020100 Sobic006G030200 Sobic006G030200 Sobic009G210400--Sobic006G030200 Sobic001G314000 Sobic001G314000 Sobic009G210400--Sobic001G314000 Sobic009G210400--Sobic003G246300 Sobic004G323000 Sobic004G323000 Sobic009G210400--Sobic004G323000 Sobic006G119000 Sobic006G119000 Sobic009G210400--Sobic006G119000 Sobic009G210400--Sobic005G231300 Sobic009G210400--Sobic010G176800 Sobic006G135500 Sobic006G135500 Sobic009G210400--Sobic006G135500 Sobic003G094700 Sobic003G094700 Sobic008G048100--Sobic003G094700 Sobic008G048100--Sobic005G041400 Sobic008G048100--Sobic001G173700 Sobic004G283900 Sobic004G283900 Sobic008G048100--Sobic004G283900 Sobic006G003601 Sobic006G003601 Sobic008G048100--Sobic006G003601 Sobic001G212451 Sobic001G212451 Sobic008G048100--Sobic001G212451 Sobic007G087600 Sobic007G087600 Sobic008G048100--Sobic007G087600 Sobic001G464300 Sobic001G464300 Sobic008G048100--Sobic001G464300 Sobic002G163200 Sobic002G163200 Sobic008G048100--Sobic002G163200 Sobic001G173700--Sobic001G464300 Sobic004G126500 Sobic004G126500 Sobic001G173700--Sobic004G126500 Sobic005G104200 Sobic005G104200 Sobic001G173700--Sobic005G104200 Sobic007G041600 Sobic007G041600 Sobic001G173700--Sobic007G041600 Sobic004G248500 Sobic004G248500 Sobic001G173700--Sobic004G248500 Sobic001G348800 Sobic001G348800 Sobic001G173700--Sobic001G348800 Sobic002G019100 Sobic002G019100 Sobic001G173700--Sobic002G019100 Sobic001G238500 Sobic001G238500 Sobic001G173700--Sobic001G238500 Sobic005G115300 Sobic005G115300 Sobic001G173700--Sobic005G115300 Sobic001G402400 Sobic001G402400 Sobic003G052100--Sobic001G402400 Sobic003G052100--Sobic007G041600 Sobic002G275500 Sobic002G275500 Sobic003G052100--Sobic002G275500 Sobic010G220300 Sobic010G220300 Sobic003G052100--Sobic010G220300 Sobic006G009500 Sobic006G009500 Sobic003G052100--Sobic006G009500 Sobic009G079900 Sobic009G079900 Sobic003G052100--Sobic009G079900 Sobic003G296500 Sobic003G296500 Sobic003G052100--Sobic003G296500 Sobic003G052100--Sobic005G231300 Sobic004G271500 Sobic004G271500 Sobic003G052100--Sobic004G271500 Sobic008G134700 Sobic008G134700 Sobic006G077000--Sobic008G134700 Sobic006G077000--Sobic006G135500 Sobic009G096300 Sobic009G096300 Sobic006G077000--Sobic009G096300 Sobic010G139100 Sobic010G139100 Sobic006G077000--Sobic010G139100 Sobic010G174100 Sobic010G174100 Sobic006G077000--Sobic010G174100 Sobic002G392300 Sobic002G392300 Sobic006G077000--Sobic002G392300 Sobic006G077000--Sobic006G171300 Sobic006G077000--Sobic004G323000 Sobic005G161200 Sobic005G161200 Sobic006G077000--Sobic005G161200 Sobic007G168900 Sobic007G168900 Sobic002G142200--Sobic007G168900 Sobic010G017400 Sobic010G017400 Sobic002G142200--Sobic010G017400 Sobic001G177900 Sobic001G177900 Sobic002G142200--Sobic001G177900 Sobic001G029800 Sobic001G029800 Sobic002G142200--Sobic001G029800 Sobic005G144600 Sobic005G144600 Sobic002G142200--Sobic005G144600 Sobic004G287700 Sobic004G287700 Sobic002G142200--Sobic004G287700 Sobic003G294500 Sobic003G294500 Sobic002G142200--Sobic003G294500 Sobic003G314900 Sobic003G314900 Sobic002G142200--Sobic003G314900 Sobic009G208900 Sobic009G208900 Sobic002G142200--Sobic009G208900 Sobic001G514300 Sobic001G514300 Sobic005G231300--Sobic001G514300 Sobic003G083600 Sobic003G083600 Sobic005G231300--Sobic003G083600 Sobic005G231300--Sobic009G079900 Sobic008G099100 Sobic008G099100 Sobic005G231300--Sobic008G099100 Sobic007G208100 Sobic007G208100 Sobic005G231300--Sobic007G208100 Sobic005G231300--Sobic006G030200 Sobic005G231300--Sobic001G314000 Sobic008G077300 Sobic008G077300 Sobic005G231300--Sobic008G077300 Sobic003G151900 Sobic003G151900 Sobic005G231300--Sobic003G151900 Sobic006G194700 Sobic006G194700 Sobic001G479600--Sobic006G194700 Sobic002G057500 Sobic002G057500 Sobic001G479600--Sobic002G057500 Sobic004G252800 Sobic004G252800 Sobic001G479600--Sobic004G252800 Sobic003G125000 Sobic003G125000 Sobic001G479600--Sobic003G125000 Sobic001G316800 Sobic001G316800 Sobic001G479600--Sobic001G316800 Sobic007G003000 Sobic007G003000 Sobic001G479600--Sobic007G003000 Sobic001G427600 Sobic001G427600 Sobic001G479600--Sobic001G427600 Sobic005G161700 Sobic005G161700 Sobic001G479600--Sobic005G161700 Sobic001G479600--Sobic005G041400
Octagon: transcription factors


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