Gene annotation
Transcriptome id Sobic.008G048100.2
Synonym Sb08g004080
Functional annotation citrate-binding protein precursor, putative, expressed
UniProt A0A1Z5R4X8
Pfam PF08787
Panther DB PTHR33681 PTHR33681:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g06830.1 : citrate-binding protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a012910
Brachypodium -
Barley HORVU7Hr1G113710.2 , HORVU7Hr1G113710.3 , HORVU7Hr1G113710.1 , HORVU3Hr1G020010.1 , HORVU3Hr1G020010.2 , HORVU3Hr1G020010.3 , HORVU3Hr1G020080.1
Wheat TraesCS3D02G112500 , TraesCS7B02G109400 , TraesCS7A02G063000 , TraesCS7D02G496600 , TraesCS3A02G110600 , TraesCS7A02G063100 , TraesCS7A02G508400 , TraesCS3A02G110700 , TraesCS3A02G110500 , TraesCS7B02G417600 , TraesCS3B02G129600 , TraesCS2B02G088200 , TraesCS7A02G062900 , TraesCS7A02G508500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G094700 glycosyltransferase protein, putative, expressed -
2 Sobic.005G041400 expressed protein -
3 Sobic.001G173700 universal stress protein domain containing protein, putative, expressed -
4 Sobic.004G283900 cytochrome P450, putative, expressed -
5 Sobic.006G003601 - -
6 Sobic.001G212451 - -
7 Sobic.007G087600 homeobox domain containing protein, expressed -
8 Sobic.001G464300 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.002G163200 - -
10 Sobic.004G248500 GDSL-like lipase/acylhydrolase, putative, expressed -
11 Sobic.005G115300 expressed protein -
12 Sobic.010G256400 glycosyltransferase protein, putative, expressed -
13 Sobic.003G141200 receptor-like protein kinase 5 precursor, putative, expressed K13415: protein brassinosteroid insensitive 1
14 Sobic.001G149400 ankyrin repeat domain-containing protein 50, putative, expressed -
15 Sobic.001G261448 - -
16 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
17 Sobic.003G185300 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
18 Sobic.010G271200 expressed protein -
19 Sobic.001G026300 sex determination protein tasselseed-2, putative, expressed -
20 Sobic.005G010100 BTB9 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain, expressed K10523: speckle-type POZ protein


Gene co-expression network
sample Sobic008G048100 Sobic008G048100 Sobic003G094700 Sobic003G094700 Sobic008G048100--Sobic003G094700 Sobic005G041400 Sobic005G041400 Sobic008G048100--Sobic005G041400 Sobic001G173700 Sobic001G173700 Sobic008G048100--Sobic001G173700 Sobic004G283900 Sobic004G283900 Sobic008G048100--Sobic004G283900 Sobic006G003601 Sobic006G003601 Sobic008G048100--Sobic006G003601 Sobic001G212451 Sobic001G212451 Sobic008G048100--Sobic001G212451 Sobic007G087600 Sobic007G087600 Sobic008G048100--Sobic007G087600 Sobic001G464300 Sobic001G464300 Sobic008G048100--Sobic001G464300 Sobic002G163200 Sobic002G163200 Sobic008G048100--Sobic002G163200 Sobic010G256400 Sobic010G256400 Sobic003G094700--Sobic010G256400 Sobic002G019100 Sobic002G019100 Sobic003G094700--Sobic002G019100 Sobic004G322000 Sobic004G322000 Sobic003G094700--Sobic004G322000 Sobic003G240500 Sobic003G240500 Sobic003G094700--Sobic003G240500 Sobic001G506700 Sobic001G506700 Sobic003G094700--Sobic001G506700 Sobic006G205500 Sobic006G205500 Sobic003G094700--Sobic006G205500 Sobic006G117500 Sobic006G117500 Sobic003G094700--Sobic006G117500 Sobic005G104200 Sobic005G104200 Sobic003G094700--Sobic005G104200 Sobic001G506600 Sobic001G506600 Sobic003G094700--Sobic001G506600 Sobic003G246300 Sobic003G246300 Sobic005G041400--Sobic003G246300 Sobic009G210400 Sobic009G210400 Sobic005G041400--Sobic009G210400 Sobic005G041400--Sobic008G048100 Sobic005G041400--Sobic001G173700 Sobic003G052100 Sobic003G052100 Sobic005G041400--Sobic003G052100 Sobic006G077000 Sobic006G077000 Sobic005G041400--Sobic006G077000 Sobic002G142200 Sobic002G142200 Sobic005G041400--Sobic002G142200 Sobic005G231300 Sobic005G231300 Sobic005G041400--Sobic005G231300 Sobic001G479600 Sobic001G479600 Sobic005G041400--Sobic001G479600 Sobic001G173700--Sobic001G464300 Sobic004G126500 Sobic004G126500 Sobic001G173700--Sobic004G126500 Sobic001G173700--Sobic005G104200 Sobic007G041600 Sobic007G041600 Sobic001G173700--Sobic007G041600 Sobic004G248500 Sobic004G248500 Sobic001G173700--Sobic004G248500 Sobic001G348800 Sobic001G348800 Sobic001G173700--Sobic001G348800 Sobic001G173700--Sobic002G019100 Sobic001G238500 Sobic001G238500 Sobic001G173700--Sobic001G238500 Sobic005G115300 Sobic005G115300 Sobic001G173700--Sobic005G115300 Sobic004G283900--Sobic006G003601 Sobic004G249000 Sobic004G249000 Sobic004G283900--Sobic004G249000 Sobic003G203600 Sobic003G203600 Sobic004G283900--Sobic003G203600 Sobic004G283900--Sobic002G163200 Sobic006G074200 Sobic006G074200 Sobic004G283900--Sobic006G074200 Sobic002G404100 Sobic002G404100 Sobic004G283900--Sobic002G404100 Sobic006G183900 Sobic006G183900 Sobic004G283900--Sobic006G183900 Sobic010G271200 Sobic010G271200 Sobic004G283900--Sobic010G271200 Sobic005G066000 Sobic005G066000 Sobic004G283900--Sobic005G066000 Sobic006G003601--Sobic004G283900 Sobic006G003601--Sobic005G066000 Sobic002G107466 Sobic002G107466 Sobic006G003601--Sobic002G107466 Sobic006G003601--Sobic002G163200 Sobic006G003601--Sobic001G212451 Sobic006G252600 Sobic006G252600 Sobic006G003601--Sobic006G252600 Sobic006G003601--Sobic004G248500 Sobic005G097600 Sobic005G097600 Sobic006G003601--Sobic005G097600 Sobic001G503000 Sobic001G503000 Sobic006G003601--Sobic001G503000 Sobic001G212451--Sobic001G464300 Sobic001G212451--Sobic004G248500 Sobic002G391200 Sobic002G391200 Sobic001G212451--Sobic002G391200 Sobic010G021700 Sobic010G021700 Sobic001G212451--Sobic010G021700 Sobic001G212451--Sobic005G097600 Sobic007G109600 Sobic007G109600 Sobic001G212451--Sobic007G109600 Sobic002G307900 Sobic002G307900 Sobic001G212451--Sobic002G307900 Sobic005G036900 Sobic005G036900 Sobic001G212451--Sobic005G036900 Sobic001G301400 Sobic001G301400 Sobic001G212451--Sobic001G301400 Sobic001G261448 Sobic001G261448 Sobic007G087600--Sobic001G261448 Sobic001G308600 Sobic001G308600 Sobic007G087600--Sobic001G308600 Sobic007G087600--Sobic010G271200 Sobic007G087600--Sobic002G307900 Sobic007G087600--Sobic001G301400 Sobic007G087600--Sobic001G464300 Sobic007G087600--Sobic004G248500 Sobic003G059000 Sobic003G059000 Sobic007G087600--Sobic003G059000 Sobic007G087600--Sobic002G391200 Sobic001G464300--Sobic001G212451 Sobic001G464300--Sobic002G391200 Sobic001G464300--Sobic004G248500 Sobic001G464300--Sobic001G173700 Sobic001G464300--Sobic010G021700 Sobic002G082700 Sobic002G082700 Sobic001G464300--Sobic002G082700 Sobic001G464300--Sobic005G104200 Sobic001G464300--Sobic001G348800 Sobic001G464300--Sobic001G301400 Sobic002G163200--Sobic006G117500 Sobic002G163200--Sobic001G503000 Sobic002G163200--Sobic005G115300 Sobic002G163200--Sobic001G238500 Sobic002G163200--Sobic005G104200 Sobic003G287200 Sobic003G287200 Sobic002G163200--Sobic003G287200 Sobic002G163200--Sobic001G506600 Sobic005G066300 Sobic005G066300 Sobic002G163200--Sobic005G066300 Sobic004G108800 Sobic004G108800 Sobic002G163200--Sobic004G108800
Octagon: transcription factors


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