Gene annotation
Transcriptome id Sobic.001G261448.1
Synonym -
Functional annotation -
UniProt C6JRS4 , A0A109NDP6
Pfam PF00010
Panther DB PTHR11969 PTHR11969:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G72210 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os10g23050.1 : helix-loop-helix DNA-binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a001021 , Zm00025a004941 , Zm00025a053227
Brachypodium KQJ84300
Barley -
Wheat TraesCS2A02G448800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G087600 homeobox domain containing protein, expressed -
2 Sobic.003G185300 dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
3 Sobic.005G115300 expressed protein -
4 Sobic.004G312200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./middle senescence marker during developmental senescence(PubMedID : 27586543)@WRKY32, expressed -
5 Sobic.004G248500 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.001G464300 helix-loop-helix DNA-binding domain containing protein, expressed -
7 Sobic.001G055400 WRKY6, expressed -
8 Sobic.003G203600 aldehyde dehydrogenase, putative, expressed K12355: coniferyl-aldehyde dehydrogenase
9 Sobic.001G348800 OsSCP18 - Putative Serine Carboxypeptidase homologue, expressed K09646: serine carboxypeptidase 1
10 Sobic.001G067100 ferredoxin--NADP reductase, chloroplast precursor, putative, expressed K02641: ferredoxin--NADP+ reductase
11 Sobic.003G426500 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
12 Sobic.010G271200 expressed protein -
13 Sobic.006G229100 receptor-like kinase, putative, expressed -
14 Sobic.001G149400 ankyrin repeat domain-containing protein 50, putative, expressed -
15 Sobic.001G542000 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.008G011700 anthocyanin 5-O-glucosyltransferase, putative, expressed -
17 Sobic.006G196400 U-box, putative, expressed -
18 Sobic.001G209300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@secretory protein, putative, expressed -
19 Sobic.010G158400 zinc finger, C3HC4 type domain containing protein, expressed -
20 Sobic.005G080600 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic001G261448 Sobic001G261448 Sobic007G087600 Sobic007G087600 Sobic001G261448--Sobic007G087600 Sobic003G185300 Sobic003G185300 Sobic001G261448--Sobic003G185300 Sobic005G115300 Sobic005G115300 Sobic001G261448--Sobic005G115300 Sobic004G312200 Sobic004G312200 Sobic001G261448--Sobic004G312200 Sobic004G248500 Sobic004G248500 Sobic001G261448--Sobic004G248500 Sobic001G464300 Sobic001G464300 Sobic001G261448--Sobic001G464300 Sobic001G055400 Sobic001G055400 Sobic001G261448--Sobic001G055400 Sobic003G203600 Sobic003G203600 Sobic001G261448--Sobic003G203600 Sobic001G348800 Sobic001G348800 Sobic001G261448--Sobic001G348800 Sobic007G087600--Sobic001G261448 Sobic001G308600 Sobic001G308600 Sobic007G087600--Sobic001G308600 Sobic010G271200 Sobic010G271200 Sobic007G087600--Sobic010G271200 Sobic002G307900 Sobic002G307900 Sobic007G087600--Sobic002G307900 Sobic001G301400 Sobic001G301400 Sobic007G087600--Sobic001G301400 Sobic007G087600--Sobic001G464300 Sobic007G087600--Sobic004G248500 Sobic003G059000 Sobic003G059000 Sobic007G087600--Sobic003G059000 Sobic002G391200 Sobic002G391200 Sobic007G087600--Sobic002G391200 Sobic009G259800 Sobic009G259800 Sobic003G185300--Sobic009G259800 Sobic002G068000 Sobic002G068000 Sobic003G185300--Sobic002G068000 Sobic009G032900 Sobic009G032900 Sobic003G185300--Sobic009G032900 Sobic010G158400 Sobic010G158400 Sobic003G185300--Sobic010G158400 Sobic005G080600 Sobic005G080600 Sobic003G185300--Sobic005G080600 Sobic003G426500 Sobic003G426500 Sobic003G185300--Sobic003G426500 Sobic005G216500 Sobic005G216500 Sobic003G185300--Sobic005G216500 Sobic003G269900 Sobic003G269900 Sobic003G185300--Sobic003G269900 Sobic003G185300--Sobic005G115300 Sobic001G503000 Sobic001G503000 Sobic005G115300--Sobic001G503000 Sobic005G115300--Sobic004G312200 Sobic005G115300--Sobic004G248500 Sobic005G104200 Sobic005G104200 Sobic005G115300--Sobic005G104200 Sobic001G506600 Sobic001G506600 Sobic005G115300--Sobic001G506600 Sobic006G229100 Sobic006G229100 Sobic005G115300--Sobic006G229100 Sobic005G115300--Sobic001G348800 Sobic010G096700 Sobic010G096700 Sobic005G115300--Sobic010G096700 Sobic010G082000 Sobic010G082000 Sobic005G115300--Sobic010G082000 Sobic004G312200--Sobic005G115300 Sobic004G312200--Sobic001G503000 Sobic006G196400 Sobic006G196400 Sobic004G312200--Sobic006G196400 Sobic005G175900 Sobic005G175900 Sobic004G312200--Sobic005G175900 Sobic004G312200--Sobic010G082000 Sobic004G312200--Sobic003G185300 Sobic001G263300 Sobic001G263300 Sobic004G312200--Sobic001G263300 Sobic003G215300 Sobic003G215300 Sobic004G312200--Sobic003G215300 Sobic001G149400 Sobic001G149400 Sobic004G312200--Sobic001G149400 Sobic004G248500--Sobic005G115300 Sobic004G248500--Sobic001G503000 Sobic004G248500--Sobic001G464300 Sobic007G109600 Sobic007G109600 Sobic004G248500--Sobic007G109600 Sobic004G248500--Sobic004G312200 Sobic004G248500--Sobic001G348800 Sobic006G183900 Sobic006G183900 Sobic004G248500--Sobic006G183900 Sobic004G248500--Sobic005G104200 Sobic004G248500--Sobic001G263300 Sobic001G212451 Sobic001G212451 Sobic001G464300--Sobic001G212451 Sobic001G464300--Sobic002G391200 Sobic001G464300--Sobic004G248500 Sobic001G173700 Sobic001G173700 Sobic001G464300--Sobic001G173700 Sobic010G021700 Sobic010G021700 Sobic001G464300--Sobic010G021700 Sobic002G082700 Sobic002G082700 Sobic001G464300--Sobic002G082700 Sobic001G464300--Sobic005G104200 Sobic001G464300--Sobic001G348800 Sobic001G464300--Sobic001G301400 Sobic001G055400--Sobic003G203600 Sobic001G067100 Sobic001G067100 Sobic001G055400--Sobic001G067100 Sobic006G028400 Sobic006G028400 Sobic001G055400--Sobic006G028400 Sobic003G182200 Sobic003G182200 Sobic001G055400--Sobic003G182200 Sobic002G185800 Sobic002G185800 Sobic001G055400--Sobic002G185800 Sobic001G055400--Sobic003G426500 Sobic008G011700 Sobic008G011700 Sobic001G055400--Sobic008G011700 Sobic001G055400--Sobic006G183900 Sobic007G090472 Sobic007G090472 Sobic001G055400--Sobic007G090472 Sobic003G203600--Sobic001G067100 Sobic002G195600 Sobic002G195600 Sobic003G203600--Sobic002G195600 Sobic006G135300 Sobic006G135300 Sobic003G203600--Sobic006G135300 Sobic003G203600--Sobic010G082000 Sobic003G203600--Sobic003G426500 Sobic003G203600--Sobic006G028400 Sobic006G092700 Sobic006G092700 Sobic003G203600--Sobic006G092700 Sobic007G170300 Sobic007G170300 Sobic003G203600--Sobic007G170300 Sobic004G038700 Sobic004G038700 Sobic003G203600--Sobic004G038700 Sobic001G348800--Sobic005G104200 Sobic001G348800--Sobic005G115300 Sobic001G238500 Sobic001G238500 Sobic001G348800--Sobic001G238500 Sobic004G126500 Sobic004G126500 Sobic001G348800--Sobic004G126500 Sobic002G238700 Sobic002G238700 Sobic001G348800--Sobic002G238700 Sobic001G348800--Sobic001G503000 Sobic001G348800--Sobic004G248500 Sobic002G019100 Sobic002G019100 Sobic001G348800--Sobic002G019100 Sobic006G009700 Sobic006G009700 Sobic001G348800--Sobic006G009700
Octagon: transcription factors


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