Gene annotation
Transcriptome id Sobic.001G479600.1
Synonym Sb01g044910
Functional annotation B3 DNA binding domain containing protein, expressed
UniProt C5WUX4
Pfam PF02362
Panther DB PTHR31391 PTHR31391:SF20
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003677; DNA binding


Orthologs (automatic annotation)
TAIR AT3G19184 : AP2/B3-like transcriptional factor family protein
RAP-DB (Rice) LOC_Os03g08620.1 : B3 DNA binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a053252 , Zm00025a000966
Brachypodium KQK23265
Barley -
Wheat TraesCS4A02G003900 , TraesCS4D02G299700 , TraesCS4B02G301400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G194700 zinc finger, C3HC4 type domain containing protein, expressed K10663: E3 ubiquitin-protein ligase ATL4
2 Sobic.002G057500 C-Myc-binding protein, putative, expressed -
3 Sobic.004G252800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed -
4 Sobic.003G125000 serpin domain containing protein, putative, expressed K13963: serpin B
5 Sobic.001G316800 no apical meristem protein, putative, expressed -
6 Sobic.007G003000 no apical meristem protein, putative, expressed -
7 Sobic.001G427600 ZOS3-08 - C2H2 zinc finger protein, expressed -
8 Sobic.005G161700 cytochrome P450 51, putative, expressed K05917: sterol 14alpha-demethylase
9 Sobic.005G041400 expressed protein -
10 Sobic.001G058000 - -
11 Sobic.003G212800 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
12 Sobic.003G122200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
13 Sobic.004G233900 CRAL/TRIO domain containing protein, expressed -
14 Sobic.001G521300 expressed protein -
15 Sobic.001G288900 -(PubMedID : 26976818)@mitochondrial carrier protein, putative, expressed K15109: SLC25A20_29, CACT, CACL, solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29
16 Sobic.007G165000 zinc finger, C3HC4 type domain containing protein, expressed -
17 Sobic.001G296000 expressed protein -
18 Sobic.004G072400 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.005G005800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@laccase-23 precursor, putative, expressed K05909: laccase
20 Sobic.004G101100 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed -


Gene co-expression network
sample Sobic001G479600 Sobic001G479600 Sobic006G194700 Sobic006G194700 Sobic001G479600--Sobic006G194700 Sobic002G057500 Sobic002G057500 Sobic001G479600--Sobic002G057500 Sobic004G252800 Sobic004G252800 Sobic001G479600--Sobic004G252800 Sobic003G125000 Sobic003G125000 Sobic001G479600--Sobic003G125000 Sobic001G316800 Sobic001G316800 Sobic001G479600--Sobic001G316800 Sobic007G003000 Sobic007G003000 Sobic001G479600--Sobic007G003000 Sobic001G427600 Sobic001G427600 Sobic001G479600--Sobic001G427600 Sobic005G161700 Sobic005G161700 Sobic001G479600--Sobic005G161700 Sobic005G041400 Sobic005G041400 Sobic001G479600--Sobic005G041400 Sobic004G101100 Sobic004G101100 Sobic006G194700--Sobic004G101100 Sobic004G072400 Sobic004G072400 Sobic006G194700--Sobic004G072400 Sobic001G392000 Sobic001G392000 Sobic006G194700--Sobic001G392000 Sobic001G058000 Sobic001G058000 Sobic006G194700--Sobic001G058000 Sobic001G160400 Sobic001G160400 Sobic006G194700--Sobic001G160400 Sobic004G233900 Sobic004G233900 Sobic006G194700--Sobic004G233900 Sobic006G069400 Sobic006G069400 Sobic006G194700--Sobic006G069400 Sobic008G010700 Sobic008G010700 Sobic006G194700--Sobic008G010700 Sobic005G005800 Sobic005G005800 Sobic006G194700--Sobic005G005800 Sobic009G189200 Sobic009G189200 Sobic002G057500--Sobic009G189200 Sobic001G261549 Sobic001G261549 Sobic002G057500--Sobic001G261549 Sobic010G265900 Sobic010G265900 Sobic002G057500--Sobic010G265900 Sobic003G011100 Sobic003G011100 Sobic002G057500--Sobic003G011100 Sobic006G102900 Sobic006G102900 Sobic002G057500--Sobic006G102900 Sobic004G285900 Sobic004G285900 Sobic002G057500--Sobic004G285900 Sobic009G088200 Sobic009G088200 Sobic002G057500--Sobic009G088200 Sobic006G278100 Sobic006G278100 Sobic002G057500--Sobic006G278100 Sobic006G191700 Sobic006G191700 Sobic002G057500--Sobic006G191700 Sobic001G434300 Sobic001G434300 Sobic004G252800--Sobic001G434300 Sobic009G130300 Sobic009G130300 Sobic004G252800--Sobic009G130300 Sobic006G203700 Sobic006G203700 Sobic004G252800--Sobic006G203700 Sobic001G310300 Sobic001G310300 Sobic004G252800--Sobic001G310300 Sobic009G181800 Sobic009G181800 Sobic004G252800--Sobic009G181800 Sobic007G218800 Sobic007G218800 Sobic004G252800--Sobic007G218800 Sobic003G219800 Sobic003G219800 Sobic004G252800--Sobic003G219800 Sobic010G028200 Sobic010G028200 Sobic004G252800--Sobic010G028200 Sobic003G160700 Sobic003G160700 Sobic004G252800--Sobic003G160700 Sobic001G270200 Sobic001G270200 Sobic003G125000--Sobic001G270200 Sobic003G125000--Sobic001G160400 Sobic001G272700 Sobic001G272700 Sobic003G125000--Sobic001G272700 Sobic003G125000--Sobic004G072400 Sobic005G161500 Sobic005G161500 Sobic003G125000--Sobic005G161500 Sobic006G092200 Sobic006G092200 Sobic003G125000--Sobic006G092200 Sobic007G165000 Sobic007G165000 Sobic003G125000--Sobic007G165000 Sobic001G303600 Sobic001G303600 Sobic003G125000--Sobic001G303600 Sobic001G288900 Sobic001G288900 Sobic003G125000--Sobic001G288900 Sobic001G307800 Sobic001G307800 Sobic001G316800--Sobic001G307800 Sobic002G280300 Sobic002G280300 Sobic001G316800--Sobic002G280300 Sobic004G170800 Sobic004G170800 Sobic001G316800--Sobic004G170800 Sobic007G225400 Sobic007G225400 Sobic001G316800--Sobic007G225400 Sobic005G142500 Sobic005G142500 Sobic001G316800--Sobic005G142500 Sobic001G514300 Sobic001G514300 Sobic001G316800--Sobic001G514300 Sobic001G264400 Sobic001G264400 Sobic001G316800--Sobic001G264400 Sobic008G099100 Sobic008G099100 Sobic001G316800--Sobic008G099100 Sobic005G088300 Sobic005G088300 Sobic001G316800--Sobic005G088300 Sobic007G003000--Sobic005G005800 Sobic007G003000--Sobic001G058000 Sobic007G003000--Sobic006G194700 Sobic007G003000--Sobic001G479600 Sobic007G003000--Sobic004G072400 Sobic007G003000--Sobic003G125000 Sobic001G086200 Sobic001G086200 Sobic007G003000--Sobic001G086200 Sobic007G003000--Sobic001G392000 Sobic003G082700 Sobic003G082700 Sobic007G003000--Sobic003G082700 Sobic001G427600--Sobic007G165000 Sobic001G427600--Sobic001G479600 Sobic001G331700 Sobic001G331700 Sobic001G427600--Sobic001G331700 Sobic003G212800 Sobic003G212800 Sobic001G427600--Sobic003G212800 Sobic002G267300 Sobic002G267300 Sobic001G427600--Sobic002G267300 Sobic010G088400 Sobic010G088400 Sobic001G427600--Sobic010G088400 Sobic001G427600--Sobic006G069400 Sobic007G193500 Sobic007G193500 Sobic001G427600--Sobic007G193500 Sobic009G067200 Sobic009G067200 Sobic001G427600--Sobic009G067200 Sobic003G405300 Sobic003G405300 Sobic005G161700--Sobic003G405300 Sobic007G176100 Sobic007G176100 Sobic005G161700--Sobic007G176100 Sobic001G018600 Sobic001G018600 Sobic005G161700--Sobic001G018600 Sobic010G190300 Sobic010G190300 Sobic005G161700--Sobic010G190300 Sobic004G234100 Sobic004G234100 Sobic005G161700--Sobic004G234100 Sobic007G030501 Sobic007G030501 Sobic005G161700--Sobic007G030501 Sobic002G261300 Sobic002G261300 Sobic005G161700--Sobic002G261300 Sobic007G176000 Sobic007G176000 Sobic005G161700--Sobic007G176000 Sobic010G113100 Sobic010G113100 Sobic005G161700--Sobic010G113100 Sobic003G246300 Sobic003G246300 Sobic005G041400--Sobic003G246300 Sobic009G210400 Sobic009G210400 Sobic005G041400--Sobic009G210400 Sobic008G048100 Sobic008G048100 Sobic005G041400--Sobic008G048100 Sobic001G173700 Sobic001G173700 Sobic005G041400--Sobic001G173700 Sobic003G052100 Sobic003G052100 Sobic005G041400--Sobic003G052100 Sobic006G077000 Sobic006G077000 Sobic005G041400--Sobic006G077000 Sobic002G142200 Sobic002G142200 Sobic005G041400--Sobic002G142200 Sobic005G231300 Sobic005G231300 Sobic005G041400--Sobic005G231300 Sobic005G041400--Sobic001G479600
Octagon: transcription factors


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