Gene annotation
Transcriptome id Sobic.004G233900.1
Synonym Sb04g027710
Functional annotation CRAL/TRIO domain containing protein, expressed
UniProt C5XYP7
Pfam PF03765 PF00650
Panther DB PTHR10174 PTHR10174:SF124
NCBI CDD KOG1470; Phosphatidylinositol transfer protein PDR16 and related proteins
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G22180 : Sec14p-like phosphatidylinositol transfer family protein
RAP-DB (Rice) LOC_Os02g51610.1 : CRAL/TRIO domain containing protein, expressed
MaizeGDB (Corn) Zm00025a033173
Brachypodium KQK01880 , KQK01879 , KQK01878 , KQK01877 , PNT69621 , PNT69620
Barley HORVU6Hr1G075070.4 , HORVU6Hr1G075070.5 , HORVU6Hr1G075070.1 , HORVU6Hr1G075070.3 , HORVU6Hr1G075070.2
Wheat TraesCS6D02G281700 , TraesCS6B02G331400 , TraesCS6A02G302200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G133100 cytochrome P450 72A1, putative, expressed -
2 Sobic.004G072400 GDSL-like lipase/acylhydrolase, putative, expressed -
3 Sobic.001G058000 - -
4 Sobic.004G101100 STIGL3 - Stigma-specific Stig1 family protein precursor, putative, expressed -
5 Sobic.001G364200 cytochrome P450, putative, expressed -
6 Sobic.007G131300 endoglucanase, putative, expressed -
7 Sobic.004G133301 - -
8 Sobic.001G270200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
9 Sobic.001G393600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plant protein of unknown function domain containing protein, expressed -
10 Sobic.002G384800 pentatricopeptide, putative, expressed -
11 Sobic.002G156700 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.005G050900 - -
13 Sobic.006G194700 zinc finger, C3HC4 type domain containing protein, expressed K10663: E3 ubiquitin-protein ligase ATL4
14 Sobic.002G241700 phosphatidylinositol transfer, putative, expressed -
15 Sobic.004G082050 - K02935: RP-L7, MRPL12, large subunit ribosomal protein L7/L12
16 Sobic.006G057300 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@leucoanthocyanidin dioxygenase, putative, expressed -
17 Sobic.002G070400 - -
18 Sobic.010G065500 BHLH transcription factor, putative, expressed -
19 Sobic.003G161950 - -
20 Sobic.002G407500 sex determination protein tasselseed-2, putative, expressed -


Gene co-expression network
sample Sobic004G233900 Sobic004G233900 Sobic009G133100 Sobic009G133100 Sobic004G233900--Sobic009G133100 Sobic004G072400 Sobic004G072400 Sobic004G233900--Sobic004G072400 Sobic001G058000 Sobic001G058000 Sobic004G233900--Sobic001G058000 Sobic004G101100 Sobic004G101100 Sobic004G233900--Sobic004G101100 Sobic001G364200 Sobic001G364200 Sobic004G233900--Sobic001G364200 Sobic007G131300 Sobic007G131300 Sobic004G233900--Sobic007G131300 Sobic004G133301 Sobic004G133301 Sobic004G233900--Sobic004G133301 Sobic001G270200 Sobic001G270200 Sobic004G233900--Sobic001G270200 Sobic001G393600 Sobic001G393600 Sobic004G233900--Sobic001G393600 Sobic009G133100--Sobic007G131300 Sobic009G133100--Sobic004G072400 Sobic010G065500 Sobic010G065500 Sobic009G133100--Sobic010G065500 Sobic009G133100--Sobic001G364200 Sobic002G070400 Sobic002G070400 Sobic009G133100--Sobic002G070400 Sobic008G055650 Sobic008G055650 Sobic009G133100--Sobic008G055650 Sobic005G030200 Sobic005G030200 Sobic009G133100--Sobic005G030200 Sobic008G147800 Sobic008G147800 Sobic009G133100--Sobic008G147800 Sobic005G005100 Sobic005G005100 Sobic009G133100--Sobic005G005100 Sobic004G072400--Sobic009G133100 Sobic004G072400--Sobic001G058000 Sobic004G072400--Sobic001G364200 Sobic004G072400--Sobic007G131300 Sobic004G072400--Sobic008G055650 Sobic004G072400--Sobic004G101100 Sobic005G050900 Sobic005G050900 Sobic004G072400--Sobic005G050900 Sobic001G392000 Sobic001G392000 Sobic004G072400--Sobic001G392000 Sobic004G072400--Sobic004G233900 Sobic001G058000--Sobic004G072400 Sobic001G058000--Sobic009G133100 Sobic001G058000--Sobic004G233900 Sobic001G058000--Sobic001G364200 Sobic009G190900 Sobic009G190900 Sobic001G058000--Sobic009G190900 Sobic001G058000--Sobic005G050900 Sobic001G058000--Sobic004G101100 Sobic001G058000--Sobic007G131300 Sobic005G005800 Sobic005G005800 Sobic001G058000--Sobic005G005800 Sobic006G057300 Sobic006G057300 Sobic004G101100--Sobic006G057300 Sobic006G194700 Sobic006G194700 Sobic004G101100--Sobic006G194700 Sobic004G101100--Sobic004G072400 Sobic004G101100--Sobic004G233900 Sobic004G101100--Sobic009G133100 Sobic001G160400 Sobic001G160400 Sobic004G101100--Sobic001G160400 Sobic004G101100--Sobic001G058000 Sobic008G010700 Sobic008G010700 Sobic004G101100--Sobic008G010700 Sobic002G122900 Sobic002G122900 Sobic004G101100--Sobic002G122900 Sobic002G156700 Sobic002G156700 Sobic001G364200--Sobic002G156700 Sobic001G364200--Sobic002G070400 Sobic002G046400 Sobic002G046400 Sobic001G364200--Sobic002G046400 Sobic001G364200--Sobic005G005100 Sobic008G045100 Sobic008G045100 Sobic001G364200--Sobic008G045100 Sobic001G364200--Sobic010G065500 Sobic004G082050 Sobic004G082050 Sobic001G364200--Sobic004G082050 Sobic001G001000 Sobic001G001000 Sobic001G364200--Sobic001G001000 Sobic002G277900 Sobic002G277900 Sobic001G364200--Sobic002G277900 Sobic007G131300--Sobic010G065500 Sobic007G131300--Sobic008G147800 Sobic003G083100 Sobic003G083100 Sobic007G131300--Sobic003G083100 Sobic007G131300--Sobic009G133100 Sobic007G131300--Sobic005G030200 Sobic009G258200 Sobic009G258200 Sobic007G131300--Sobic009G258200 Sobic007G131300--Sobic008G055650 Sobic002G063500 Sobic002G063500 Sobic007G131300--Sobic002G063500 Sobic007G131300--Sobic005G050900 Sobic004G133301--Sobic001G393600 Sobic004G133301--Sobic001G364200 Sobic004G133301--Sobic002G156700 Sobic002G252600 Sobic002G252600 Sobic004G133301--Sobic002G252600 Sobic005G190700 Sobic005G190700 Sobic004G133301--Sobic005G190700 Sobic001G044100 Sobic001G044100 Sobic004G133301--Sobic001G044100 Sobic005G019900 Sobic005G019900 Sobic004G133301--Sobic005G019900 Sobic004G133301--Sobic002G070400 Sobic003G407400 Sobic003G407400 Sobic004G133301--Sobic003G407400 Sobic007G165000 Sobic007G165000 Sobic001G270200--Sobic007G165000 Sobic001G270200--Sobic001G044100 Sobic008G009450 Sobic008G009450 Sobic001G270200--Sobic008G009450 Sobic001G270200--Sobic001G364200 Sobic003G125000 Sobic003G125000 Sobic001G270200--Sobic003G125000 Sobic001G270200--Sobic001G393600 Sobic001G270200--Sobic004G133301 Sobic001G270200--Sobic004G072400 Sobic010G088400 Sobic010G088400 Sobic001G270200--Sobic010G088400 Sobic001G393600--Sobic010G065500 Sobic004G327100 Sobic004G327100 Sobic001G393600--Sobic004G327100 Sobic001G393600--Sobic002G070400 Sobic006G088500 Sobic006G088500 Sobic001G393600--Sobic006G088500 Sobic001G393600--Sobic004G082050 Sobic007G100900 Sobic007G100900 Sobic001G393600--Sobic007G100900 Sobic001G393600--Sobic003G407400 Sobic005G013700 Sobic005G013700 Sobic001G393600--Sobic005G013700 Sobic003G066250 Sobic003G066250 Sobic001G393600--Sobic003G066250
Octagon: transcription factors


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