Gene annotation
Transcriptome id Sobic.006G114600.1
Synonym SAV1, SNP2, DWF4, CLM, CYP90B1, Sb06g019600, PSC1
Functional annotation "D11(Ortholog in rice:Tanabe et al., 2005 (PubMedID : 31659897)
Wu et al., 2008)( (PubMedID : 26759170,(PubMedID : 24597475)
cytochrome P450, putative, expressed
UniProt C5YAA8
Pfam PF00067
Panther DB PTHR24286 PTHR24286:SF29
NCBI CDD KOG0157; Cytochrome P450 CYP4/CYP19/CYP26 subfamilies
KEGG Orthology K12639; CYP724B1, cytochrome P450 family 724 subfamily B polypeptide 1
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT3G50660 : Cytochrome P450 superfamily protein
RAP-DB (Rice) LOC_Os04g39430.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a043149 , Zm00025a011051
Brachypodium KQJ83103 , KQJ83091
Barley HORVU2Hr1G081650.14 , HORVU2Hr1G081650.10 , HORVU2Hr1G081650.11 , HORVU2Hr1G081650.12 , HORVU2Hr1G081650.13 , HORVU2Hr1G081650.8 , HORVU2Hr1G081650.9 , HORVU2Hr1G081650.6 , HORVU2Hr1G081650.7 , HORVU2Hr1G081650.4 , HORVU2Hr1G081650.5 , HORVU2Hr1G081650.2 , HORVU2Hr1G081650.3 , HORVU2Hr1G081650.1
Wheat TraesCS2A02G331800 , TraesCS2A02G331800 , TraesCS2B02G350400 , TraesCS2B02G350400 , TraesCS2D02G331100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G231300 thaumatin, putative, expressed -
2 Sobic.001G314000 peroxidase precursor, putative, expressed K00430: peroxidase
3 Sobic.001G514300 Glutathione S-transferase("PubMedID : 26759170,PubMedID : 24597475")@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.010G176800 ABC transporter, ATP-binding protein, putative, expressed -
5 Sobic.009G079900 endoglucanase precursor, putative, expressed -
6 Sobic.009G210400 heavy metal-associated domain containing protein, expressed -
7 Sobic.002G034301 - -
8 Sobic.006G201000 WRKY37, expressed -
9 Sobic.001G076300 EF hand family protein, putative, expressed K13448: calcium-binding protein CML
10 Sobic.009G098000 expressed protein -
11 Sobic.006G119000 X8 domain containing protein, expressed -
12 Sobic.003G246300 expressed protein -
13 Sobic.003G052100 receptor-like protein kinase 2 precursor, putative, expressed -
14 Sobic.008G099100 expressed protein -
15 Sobic.001G301900 ZOS10-07 - C2H2 zinc finger protein, expressed -
16 Sobic.007G208100 heavy metal-associated domain containing protein, expressed -
17 Sobic.003G269100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@AWPM-19-like membrane family protein, putative, expressed -
18 Sobic.006G160900 NAC domain containing protein, putative, expressed -
19 Sobic.003G083600 DNA binding protein, putative, expressed -
20 Sobic.002G383900 sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase


Gene co-expression network
sample Sobic006G114600 Sobic006G114600 Sobic005G231300 Sobic005G231300 Sobic006G114600--Sobic005G231300 Sobic001G314000 Sobic001G314000 Sobic006G114600--Sobic001G314000 Sobic001G514300 Sobic001G514300 Sobic006G114600--Sobic001G514300 Sobic010G176800 Sobic010G176800 Sobic006G114600--Sobic010G176800 Sobic009G079900 Sobic009G079900 Sobic006G114600--Sobic009G079900 Sobic009G210400 Sobic009G210400 Sobic006G114600--Sobic009G210400 Sobic002G034301 Sobic002G034301 Sobic006G114600--Sobic002G034301 Sobic006G201000 Sobic006G201000 Sobic006G114600--Sobic006G201000 Sobic001G076300 Sobic001G076300 Sobic006G114600--Sobic001G076300 Sobic005G231300--Sobic001G514300 Sobic003G083600 Sobic003G083600 Sobic005G231300--Sobic003G083600 Sobic005G231300--Sobic009G079900 Sobic008G099100 Sobic008G099100 Sobic005G231300--Sobic008G099100 Sobic007G208100 Sobic007G208100 Sobic005G231300--Sobic007G208100 Sobic006G030200 Sobic006G030200 Sobic005G231300--Sobic006G030200 Sobic005G231300--Sobic001G314000 Sobic008G077300 Sobic008G077300 Sobic005G231300--Sobic008G077300 Sobic003G151900 Sobic003G151900 Sobic005G231300--Sobic003G151900 Sobic003G183300 Sobic003G183300 Sobic001G314000--Sobic003G183300 Sobic001G314000--Sobic009G079900 Sobic001G314000--Sobic001G514300 Sobic003G426200 Sobic003G426200 Sobic001G314000--Sobic003G426200 Sobic007G206800 Sobic007G206800 Sobic001G314000--Sobic007G206800 Sobic002G391400 Sobic002G391400 Sobic001G314000--Sobic002G391400 Sobic005G052700 Sobic005G052700 Sobic001G314000--Sobic005G052700 Sobic002G334000 Sobic002G334000 Sobic001G314000--Sobic002G334000 Sobic006G205700 Sobic006G205700 Sobic001G314000--Sobic006G205700 Sobic001G514300--Sobic005G231300 Sobic001G514300--Sobic008G099100 Sobic001G514300--Sobic003G083600 Sobic001G514300--Sobic001G314000 Sobic001G514300--Sobic009G079900 Sobic001G514300--Sobic008G077300 Sobic008G135300 Sobic008G135300 Sobic001G514300--Sobic008G135300 Sobic001G514300--Sobic003G151900 Sobic003G269100 Sobic003G269100 Sobic001G514300--Sobic003G269100 Sobic010G176800--Sobic009G079900 Sobic004G008600 Sobic004G008600 Sobic010G176800--Sobic004G008600 Sobic001G272600 Sobic001G272600 Sobic010G176800--Sobic001G272600 Sobic001G506100 Sobic001G506100 Sobic010G176800--Sobic001G506100 Sobic005G134200 Sobic005G134200 Sobic010G176800--Sobic005G134200 Sobic010G269000 Sobic010G269000 Sobic010G176800--Sobic010G269000 Sobic007G220400 Sobic007G220400 Sobic010G176800--Sobic007G220400 Sobic009G060700 Sobic009G060700 Sobic010G176800--Sobic009G060700 Sobic004G271500 Sobic004G271500 Sobic010G176800--Sobic004G271500 Sobic009G079900--Sobic009G060700 Sobic007G020700 Sobic007G020700 Sobic009G079900--Sobic007G020700 Sobic009G079900--Sobic005G052700 Sobic002G029600 Sobic002G029600 Sobic009G079900--Sobic002G029600 Sobic003G079100 Sobic003G079100 Sobic009G079900--Sobic003G079100 Sobic010G213600 Sobic010G213600 Sobic009G079900--Sobic010G213600 Sobic009G079900--Sobic004G008600 Sobic001G274400 Sobic001G274400 Sobic009G079900--Sobic001G274400 Sobic006G009700 Sobic006G009700 Sobic009G079900--Sobic006G009700 Sobic007G020100 Sobic007G020100 Sobic009G210400--Sobic007G020100 Sobic009G210400--Sobic006G030200 Sobic009G210400--Sobic001G314000 Sobic003G246300 Sobic003G246300 Sobic009G210400--Sobic003G246300 Sobic004G323000 Sobic004G323000 Sobic009G210400--Sobic004G323000 Sobic006G119000 Sobic006G119000 Sobic009G210400--Sobic006G119000 Sobic009G210400--Sobic005G231300 Sobic009G210400--Sobic010G176800 Sobic006G135500 Sobic006G135500 Sobic009G210400--Sobic006G135500 Sobic002G034301--Sobic007G208100 Sobic002G034301--Sobic005G231300 Sobic005G057000 Sobic005G057000 Sobic002G034301--Sobic005G057000 Sobic005G121700 Sobic005G121700 Sobic002G034301--Sobic005G121700 Sobic007G111700 Sobic007G111700 Sobic002G034301--Sobic007G111700 Sobic002G034301--Sobic008G077300 Sobic002G016400 Sobic002G016400 Sobic002G034301--Sobic002G016400 Sobic003G420100 Sobic003G420100 Sobic002G034301--Sobic003G420100 Sobic003G052100 Sobic003G052100 Sobic002G034301--Sobic003G052100 Sobic004G271800 Sobic004G271800 Sobic006G201000--Sobic004G271800 Sobic006G201000--Sobic003G183300 Sobic008G035800 Sobic008G035800 Sobic006G201000--Sobic008G035800 Sobic010G082000 Sobic010G082000 Sobic006G201000--Sobic010G082000 Sobic006G092700 Sobic006G092700 Sobic006G201000--Sobic006G092700 Sobic006G135300 Sobic006G135300 Sobic006G201000--Sobic006G135300 Sobic004G322000 Sobic004G322000 Sobic006G201000--Sobic004G322000 Sobic007G090600 Sobic007G090600 Sobic006G201000--Sobic007G090600 Sobic003G240400 Sobic003G240400 Sobic006G201000--Sobic003G240400 Sobic009G098000 Sobic009G098000 Sobic001G076300--Sobic009G098000 Sobic001G522200 Sobic001G522200 Sobic001G076300--Sobic001G522200 Sobic006G133300 Sobic006G133300 Sobic001G076300--Sobic006G133300 Sobic001G076300--Sobic001G506100 Sobic004G080300 Sobic004G080300 Sobic001G076300--Sobic004G080300 Sobic009G079200 Sobic009G079200 Sobic001G076300--Sobic009G079200 Sobic001G076300--Sobic001G314000 Sobic003G176300 Sobic003G176300 Sobic001G076300--Sobic003G176300 Sobic005G049350 Sobic005G049350 Sobic001G076300--Sobic005G049350
Octagon: transcription factors


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