Gene annotation
| Transcriptome id | Sobic.005G088400.1 |
|---|---|
| Synonym | CYP84A1, Sb05g007210, FAH1 |
| Functional annotation | cytochrome P450, putative, expressed |
| UniProt | C5Y854 |
| Pfam | PF00067 |
| Panther DB | PTHR24298 PTHR24298:SF60 |
| NCBI CDD | KOG0156; Cytochrome P450 CYP2 subfamily |
| KEGG Orthology | K09755; CYP84A, ferulate-5-hydroxylase |
| Gene Ontology | GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding |
Orthologs (automatic annotation)
| TAIR | AT4G36220 : ferulic acid 5-hydroxylase 1 |
|---|---|
| RAP-DB (Rice) | LOC_Os10g36848.1 : cytochrome P450, putative, expressed |
| MaizeGDB (Corn) | Zm00025a006335 , Zm00025a002571 , Zm00025a055858 |
| Brachypodium | - |
| Barley | HORVU1Hr1G047220.2 , HORVU1Hr1G047220.1 , HORVU2Hr1G109440.1 , HORVU3Hr1G014990.2 , HORVU3Hr1G014990.3 , HORVU3Hr1G014990.1 |
| Wheat | TraesCS3A02G037800 , TraesCS1A02G361800 , TraesCS1D02G176400 , TraesCS1A02G177800 , TraesCS1D02G366700 , TraesCS2B02G518400 , TraesCS2A02G490100 , TraesCS3D02G082600 , TraesCS1B02G202400 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.010G271400 | expressed protein | - |
| 2 | Sobic.004G292600 | LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed | - |
| 3 | Sobic.001G246900 | MBTB45 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed | K10523: speckle-type POZ protein |
| 4 | Sobic.010G156400 | expressed protein | - |
| 5 | Sobic.005G011900 | - | - |
| 6 | Sobic.001G539300 | expressed protein | - |
| 7 | Sobic.001G539300 | expressed protein | - |
| 8 | Sobic.001G539300 | expressed protein | - |
| 9 | Sobic.001G539300 | expressed protein | - |
| 10 | Sobic.001G539300 | expressed protein | - |
| 11 | Sobic.001G539300 | expressed protein | - |
| 12 | Sobic.001G162233 | - | - |
| 13 | Sobic.008G036800 | alkylresorcinol synthase gene preferentially expressed in root hair (PubMedID : 20348430)@Chalcone and stilbene synthase family("PubMedID : 26759170,PubMedID : 24597475")@chalcone synthase, putative, expressed | - |
| 14 | Sobic.003G143000 | flavonol synthase/flavanone 3-hydroxylase, putative, expressed | - |
| 15 | Sobic.007G054900 | plant protein of unknown function domain containing protein, expressed | - |
| 16 | Sobic.004G165100 | Up-regulation in phyB-1 mutant(PubMedID : 26893475)@RCN2 Centroradialis-like1 homologous to TFL1 gene@ contains Pfam profile PF01161: Phosphatidylethanolamine-binding protein, expressed | - |
| 17 | Sobic.008G184700 | CND41, chloroplast nucleoid DNA binding protein, putative, expressed | - |
| 18 | Sobic.008G158501 | - | - |
| 19 | Sobic.008G026000 | expressed protein | - |
| 20 | Sobic.002G044600 | plastocyanin-like domain containing protein, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
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